New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3148956	38 (0.910)	6 (0.150)	5/266	5.0	14.0%	intergenic (+19/+21)	gpr/yqhA	L‑glyceraldehyde 3‑phosphate reductase/UPF0114 family putative inner membrane protein
	?	NC_000913	= 3148961	38 (0.970)					intergenic (+24/+16)	gpr/yqhA	L‑glyceraldehyde 3‑phosphate reductase/UPF0114 family putative inner membrane protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TAGAGGAGAACGTGCAGGCGCTGAATAATCTGACATTTAGCACCAAGGAGCTGGCGCAGATTGATCAGCATATCGCCGATGGCGAGCTGAATCTGTGGCAGGCGTCTTCCGATAAATGACCTGTTAATAACGGGCGCGCGAACCGCGCCCGAATCAGATCAGTGATTATGACGAGTCAGTCGGTCAAGATAGCCCATCACAAATGCAGAAAGCACAAACGTCAGATGGATAATGACGTACCACATCAGTTTGTTATCCGGGACATTTTTCGCATCCATAAAGA  >  NC_000913/3148819‑3149101                                                                                                                                               |                                                                                                                                             tAGAGGAGAACGTGCAGGCGCTGAATAATCTGACATTTAGCACCAAGGAGCTGGCGCAGATTGATCAGCATATCGCCGATGGCGAGATGAAACTGTGGCAGGCGTCTTCCGATAAACGACCTGTCAATAACCGGCGCGCGAAc                                                                                                                                              >  2:569933/1‑143 (MQ=255)        gaACGTGCAGGCGCTGAATAATCTGACATTTAGCACCAAGGAGCTGGCGCAAATTGATCAGCATATCGCCGATGGCGAGCTGAATCTGTGGCAGGCGTCTTCCGATAAATGACCTGTTAATAACGGGCGCGCGACCCGAGccc                                                                                                                                       >  2:38800/1‑143 (MQ=255)            gTGCAGGCGCTGAATAAGCGGACATTTAGCACCAAGGAGCTGGCGCAGATTGATCAGCATATCGCCGATGGCGAGCTGAATCTGTGGCAGGCGTCTTCCGACAAATGACCTGTTAATAACGGGCGCGCGAACCGCGCCCGAat                                                                                                                                   <  2:194635/143‑1 (MQ=255)             tGCAGGCGCTGAATAATCTGACATTTAGCACCAAGGAGCTGGCGCAGATCGATCAGCATATCGCCGATGGCGAGCTGAATCTGTGGCAGGCGTCTTCCGATAAATGACCTGTTAATAACGGGCGCGCGAACCGCGCCCGAatc                                                                                                                                  <  1:630524/143‑1 (MQ=255)                         ataatCTGACATTTAGCACCAAGGAGCTGGCGCAGATTGATCAGCATATCGCCGATGGCGAGCTGAATCTGTGGCAGGCGTCTTCCGATAAATGACCTGTTAATAACGGGCGCGCGAACCGCGCCCGAATCAGATCAGTGAtt                                                                                                                      <  1:698911/143‑1 (MQ=255)                             tCTGACATTTAGCACCAAGGAGCTGGCGCAGATTGATCAGCATATCGCCGATGGCGAGCTGAATCTGTGGCAGGCGTCTTCCGATAAATGACCTGTTAATAACGGGCGCGCGAACCGCGCCCGAATCGGAGCAGAGATTATGa                                                                                                                  >  2:211735/1‑143 (MQ=255)                               tGACATTTAGCACCAAGGAGCTGGCGCAGATTGATCAGCATATCGCCGATGGCGAGCTGAATCTGTGGCAGGCGTCTTCCGATACATGAGCTGTCAATAACGGGCGCGCGAACCGCGCCCGAATCAGATCAGTGATTATGACg                                                                                                                >  1:172238/1‑143 (MQ=255)                                       cggagcAACGAGCTGGCGCAGATTGATCAGCGTAGCTGCGATGGCGAGCTGAATCTGTGTGAGGCGTCTTCCGATGAATGACGGGTTAATAACGGGCGCGTGAACCGAGCCCGAATCAGATCAGTGATTATGACGagtcagtc                                                                                                        <  2:75855/138‑1 (MQ=255)                                         cACCAAGGAGCTGGCGCAGATTGATCAGCATATCGCCGATGGCGAGCTGAATCTGTGGCAGGCGTCTTCCGATAAATGACCTGTTAATAACGGGCGCGCGAACCGCGCCCGAATCAGATCAGTGATTATGACGAGTCAGTCgg                                                                                                      >  1:327717/1‑143 (MQ=255)                                                 aGCTGGCGCAGATTGATCAGCATATCGCCGATGGCGCGCTGAATCTGTGGCACGCGCCTTCCGAGAAGTGACCCGTTAATAACGGGCGCGCGCACCGCGCCCGAATCAGATCAGTCACTATCGCGAGCCAGTCGGTCAAGaca                                                                                              >  2:282148/1‑141 (MQ=255)                                                    tGGCGCCGATTTATGAGCATATCGCCGATGGCGAGCTGAATCTGTGGCAGGCGTCTTCCGATAAATGACCTGTTAATAACGGGCGCGCGAACCGCGCCCGAATCAGATCAGTGATTATGACGAGTCAGTCGGTCAAGATAGcc                                                                                           <  2:69/143‑1 (MQ=255)                                                      gcgcAGATTGATCAGCATATCGCCGATGGCGAGCTGAATCTGTGGCAGGCGTCTTCCGATAAATGACCTGTTAATAACGGGCGCGCGAACCGCGCCCGAATCAGATCAGTGATTATGACGAGTCAGTCGGTCAAGATAGCCCa                                                                                         >  1:95546/1‑143 (MQ=255)                                                               gATCAGCATATCGCCGATGGCGGGCGGAATCTGTGGCAGGCGTCTGCCGATAAATGACCTGTTAATAACGGGCGCGCGAACCGCGCCCGAATCAGATCAGTGATTATGACGAGTCAGTCGGTCAAGATAGCCCATCACAAATg                                                                                <  2:139849/143‑1 (MQ=255)                                                                 tCAGCATATCGCCGATGGCGAGCTGAATCTGTGGCAGGCGTCTTCCGATAAATGACCTGTTAATAACGGGCGCGCGAACCGCGCCCGAATCAGATCAGTGATTATGACGAGTCAGTCGGCCACGCTAGCCCATCACAAATGCa                                                                              >  2:735087/1‑143 (MQ=255)                                                                 tCAGCATATCGCCGATGGCGAGCTGAATCTGTGGCAGGCGTCTTCCGATAAATGACCTGTTAATAACGGGCGCGCGAACCGCGCCCGAATCAGATCAGTGATTATGACGAGACAGGCGGCCAAGCTAGCCCATCACCAATGCa                                                                              >  2:331403/1‑143 (MQ=255)                                                                  cAGCATATCGCCGATGGCGAGCTGAATCTGTGGCAGGCGTCTTCCGATAAATGACCTGTTAATAACGGGCGCGCGAACCGCGCCCGAATCAGACCAGTGATTATGACGAGACAGTCGGTCAAGATAGCCCACCACaaaatcag                                                                             >  2:291369/1‑138 (MQ=255)                                                                     cATATCGCCGATGGCAAGCAAAATCTGGTGGTGGCGTCTTCCGATAAATGACCTGGTAATAACGGGCGCGCGAACCGCGCCCGAATCAGATCAGTGATTATGACGAGTCAGTCGGTCAAGATAGCCCATCACAAATGCAGaaa                                                                          <  1:281248/143‑1 (MQ=255)                                                                        atCGCCGATGGCGAGCTGAATCTGTGGCAGGCGTCTTCCGATAAATGACCTGATAATCACGGGCGCGCGAACCGCGCCCGAATCAGACCAGTGATTATGACGAGTCAGTCGGTCAAGATACCCCCTCCCAAATGCAGAAAGca                                                                       >  1:182051/1‑143 (MQ=255)                                                                          cGCCGAGGGCGAGCTGAATCTGTGGCAGGCGTGTTCCGATAAATGACCTGTTAAGAACGGGCGCGCGAACCGCGCCCGAATCAGGTCAGTGATTATGACGAGTCAGTCGGTCAAGATAGCCCATCACAAATGCAGAAAGcaca                                                                     <  2:377040/143‑1 (MQ=255)                                                                               aTGGCGAGCTGAATCTGTGGCAGGCGTCTTCCGATAAATGACCTGTTAATAACGGGCGCGCGAACCGCGCCCGAATCAGATCAGTGATTATGACGAGTCAGTCGGTCAAGATAGCCCATCACAAATGCAGAAAGCACAAACGt                                                                <  1:532388/143‑1 (MQ=255)                                                                                 ggCGAGCTGAATCTGTGGCAGGCGTCTTCCGATAAATGACCTGTTAATAACGGGCGCGCGAACCGCGCCCGAATCAGATCAGTGATTATGACGAGTCAGTCGGTCAAGATAGCCCATCACAAATGCAGAAAGCACAAACGTCa                                                              <  2:199666/143‑1 (MQ=255)                                                                                   cGAGCTGAATCTGTGGCAGGCGTCTTCCGATAAATGACCTGTTAATAACGGGCGCGCGAACCGCGCCCGAATCAGATCAGTGATTATGACGAGTCAGTCGGTCAAGATAGCCCATCACAAATGCAGAAAGCACAAACGTCAGa                                                            <  1:344116/143‑1 (MQ=255)                                                                                             cTGTGGCAGGCGTCTTCCGATAAATGACCTGTTAATAACGGGCGCGCGAACCGCGCCCGAATCAGATCAGTGATTATGACGAGTCAGTCGGTCAAGATAGCCCATCACAAATGCAGAAAGCACAAACCACAGATGGATAAGGa                                                  >  2:85399/1‑143 (MQ=255)                                                                                               gtgGCAGGCGTCTTCCGATAAATGACCTGTTAATAACGGGCGCGCGAACCGCGCCCGAATCAGATCAGTGATTATGACGAGTCAGTCGGTCAAGATAGCCCATCACAAATGCAGAAAGCACAAACGTCAGATGGATAATGACg                                                >  1:418076/1‑143 (MQ=255)                                                                                                  gCAGGCGTCTTCCGATAAATGACCTGTTAATAACGGGCGCGCGAACCGCGCCCGAATCAGATCAGTGATTATGACGAGTCAGTCGGTCAAGATAGCCCATCACAAATGCAGAAAGCACAAACGTCAGATGGATAATGACGTAc                                             <  2:509337/143‑1 (MQ=255)                                                                                                    gggCGTCTCGCGATAAATGACCTGTGAATGACGGGCGCGCGAACCGCGCCCGAATCAGATCAGTGATTATGACGAGGCAGTCGGTCAAGATAGCCCATCACAAATGCAGAAAGCACAAACGTCAGATGGATAATGACGTACca                                           <  2:16461/142‑1 (MQ=255)                                                                                                      gCGTCTTCCGATAAATGACCTGTTAATAACGGGCGCGCGAACCGCGCCCGAATCAGATCAGTGATTATGACGAGTCAGTCGGTCAAGATAGCCCATCACAAATGCAGAAAGCACAAACGTCAGATGGATAATGACGTACcaca                                         >  1:739408/1‑143 (MQ=255)                                                                                                           ttCCGATAAATGACCTGTTAATAACGGGCGCGCGAACCGCGCCCGACTCAGATCAGTGATTATGACGAGTCAGTCGGTCAAGATAGCCCATCACAAATGCACACAGCACAAACGTCAGATGGATAATGACGTACCACACCAGt                                    >  2:395774/1‑143 (MQ=255)                                                                                                               gATAAATGACCTGTTAATAACGGGCGCGCGAACCGCGCCCGCATCAGATCAGTGATTATGACGAGCCATTTGGTCAAGATAGCCCATCACAAATGCAGACAGCACAAACGTCAGATGGATAATGACGTACCACATCCGTTTGt                                >  1:285201/1‑143 (MQ=255)                                                                                                               gATAAATGACCTGTTAATAACGGGCGCGCGAACCGCGCCCGAATCAGATCAGTGATTATGACGAGTCAGTCGGTCAAGATAGCCCATCACAAATGCAGAAAGCACAAACGTCAGATGGATAATGACGTACCACATCAGTTTGt                                >  1:363557/1‑143 (MQ=255)                                                                                                                    aTGACCTGTTAATAACGGGCGCGCGAACCGCGCCCGAATCAGATCAGTGATTATGACGAGTCAGTCGGTCAAGATAGCCCATCACAAATGCAGAAAGCACAAACGTCAGATGGATAATGACGTACCACATCAGTTTGGTATcg                           >  2:26947/1‑142 (MQ=255)                                                                                                                       aCCTGTTAATAACGGGCGCGCGAACCGCGCCCGAATCAGATCAGTGATTATGACGAGTCAGTCGGTCAAGATAGCCCATCACAAATGCAGAAAGCACAAACGTCAGATGGATAATGACGTACCACATCAGTTTGTTATCCggg                        >  2:52350/1‑143 (MQ=255)                                                                                                                        ccTGTTAATAAGGGGCGCGCGAACCGCGCCCGAATCAGATCAGTGATTATGACGAGTCAGTCGGTCAAGATAGCCCATCACAAATGCAGAAAGCACAAACGTCAGATGGATAATGACGTACCACATCAGTTTGTTATCCGGGa                       <  2:630648/143‑1 (MQ=255)                                                                                                                           gTTAATAACGGGCGCGCGAACCGCGCCCGAATCAGATCAGTGATTATGACGAGTCAGTCGGTCAAGATAGCCCATCACAAATGCAGAAAGCACAAACGTCAGATGGATAATGACGTACCACATCAGTTTGTTATCCGGGAcct                    >  1:124609/1‑141 (MQ=255)                                                                                                                                      gcgcgcGAACCGCGCCCGAATCAGATCAGTGATTATGACGAGTCAGTCGGTCAAGATAGCCCATCACAAATGCAGAAAGCACAAACGTCAGATGGATAATGACGTACCACATCAGTTTGTTATCCGGGACCTTTTTCGCATcc         >  1:695790/1‑143 (MQ=255)                                                                                                                                          gcgAACCGCGCCCGAATCAGATCAGTGATTATGACGAGTCAGTCGGTCAAGATAGCCCATCCCAAATGCAGAAAGCACAAACGTCAGATGGATAATGACGTACCACATCAGTTTGTTATCCGGGACATTTTTCGCATcactaa     >  2:354390/1‑138 (MQ=255)                                                                                                                                            gAACCGCGCCCGAATCAGATCAGTGATTATGACGAGTCAGTCGGTCAAGATAGCCCATCACAAATGCAGAAAGCACAAACGTCAGATGGATAATGACGTACCACATCAGTTTGTTATCCGGGACATTTTTCGCGTCCATCAAg   >  2:175318/1‑143 (MQ=255)                                                                                                                                            gAACCGCGCCCGAATCAGATCAGTGATTATGACGAGTCAGTCGGTCAAGATAGCCCATCACAAATGCAGAAAGCACAAACGTCAGATGGATAATGACGTACCACATCAGTTTGTTATCCGGGACATTTTTCGCATCCATAAAg   <  1:556838/143‑1 (MQ=255)                                                                                                                                            gAACCGCGCCCGAATCAGATCAGTGATTATGACGAGTCAGTCGGTCAAGATAGCCCATCACAAATGCAGAAAGCACAAACGTCAGATGGATAATGACGTACCACATCAGTTTGTTATCCGGGACATTTTTCGCATCCATAAAg   <  2:172238/143‑1 (MQ=255)                                                                                                                                             aaCCGCGCCCGAATCAGATCAGTGATTATGACGAGTCAGTCGGTCAAGATAGCCCATCACAAATGCAGAAAGCACAAACGTCAGATGGATAATGACGTACCACATCAGTTTGTTATACGGGACATATTTCGCATACATAAAGa  >  1:82816/1‑143 (MQ=255)                                                                                                                                               |                                                                                                                                             TAGAGGAGAACGTGCAGGCGCTGAATAATCTGACATTTAGCACCAAGGAGCTGGCGCAGATTGATCAGCATATCGCCGATGGCGAGCTGAATCTGTGGCAGGCGTCTTCCGATAAATGACCTGTTAATAACGGGCGCGCGAACCGCGCCCGAATCAGATCAGTGATTATGACGAGTCAGTCGGTCAAGATAGCCCATCACAAATGCAGAAAGCACAAACGTCAGATGGATAATGACGTACCACATCAGTTTGTTATCCGGGACATTTTTCGCATCCATAAAGA  >  NC_000913/3148819‑3149101

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.