| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1925388 | 51 (1.270) | 3 (0.080) | 3/260 | 5.8 | 6.1% | intergenic (+50/‑52) | holE/yobB | DNA polymerase III, theta subunit/C‑N hydrolase family protein |
| ? | NC_000913 | = 1925402 | 46 (1.240) | intergenic (+64/‑38) | holE/yobB | DNA polymerase III, theta subunit/C‑N hydrolase family protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
ATTTGCGCAGCTGGTTTCGCGAGCGGCTTATTGCCCACCGTTTGGCTTCGGTCAATCTGTCACGTTTACCTTACGAGCCCAAACTTAAATAAAACTTATACAGAGTTACACTTTCTTACATAACGCCTGCTAAATTATGAGTATTTTCTAAACCGCACTCATAATTTGCAGTCATTTTGAAAAGGAAGTCATTATGTCGTTCTGGAAAGTTGCAGCAGCGCAATATGAGCCTCGTAAAACCTCACTCACCGAACAGGTAGCTCATCATCTGGAGTTTGTGAGGG > NC_000913/1925247‑1925530 | aTTTGCGCAGCTGGTTTCGCGAGCGGCTTATTGCCCACCGTTTGGCTTCGGTCAATCTGTCACGTTTACCTTACGAGCCCAAACTTAAATAAAACTTATACAGAGTTACACTTTCTTACATAACGCCTGCTAAATTATGAGTa < 2:458034/143‑1 (MQ=255) ttGCGCAGTTGGTTTCGCGAGCGGCTTATTGCCCACCGTTTGGCTTCGGTCAATCTGTCACGTTTACCTTACGAGCCCAAACTTAAATAAAACTTATACAGAGTTACACTTTCTTACATAACGCCTGCTAAATTATGAGTAtt < 1:522691/143‑1 (MQ=255) cgcAGCGGGTTTCGCGAGCGGCTTATTGCTCACCGTTTGGCTTCGGTCAATCTGTCACGTTTACCTTACGAGCCCAAACTTAAATAAAACTTATACAGAGTTACACTTTCTTACATAACGCCTGCTAAATTATGAGTATTTTc < 1:102086/143‑1 (MQ=255) gcAGCTGGTTTCGCGAGCGGCTTATTGCCCACCGTTTGGCTTCGGTCAATCTGTCACGTTTACCTTACGAGCCCAAACTTAAATAAAACATAAACAAAGTTAAACTTTCTTACATAACGCCTGCTAAATTATGAGAATTTTCt > 1:636410/1‑143 (MQ=255) aGCTGGTTTCGCGAGCGGCTTATTGCCCACCGTTTGGCTTCGGTCAATCTGTCACGTTTACCTTACGAGCCCAAACTTAAATAAAACTTATACAGAGTTACACTTTCTTACATAACGCCTGCTAAATTATGAGTATTTTCTaa > 1:430015/1‑143 (MQ=255) gCTGGTTTCGCGAGCGGCTTATTGCCCACCGTTTGGCTTCGGTCAATCTGTCACGTTTACCTTACGAGCCCAAACTTAAATAAAACTTATACAGAGTTACACTTTCTTACATAACGCCTGCTAAATTATGAGTATTTTCTaaa > 2:109094/1‑143 (MQ=255) cTGGTTTCGCGAGCGGCTTATTGCCCACCGTTTGGCTTCGGTCAATCTGTCACGTTTACCTTACGAGCCCAAACTTAAATAAAACTTATACAGAGTTACACTTTCTTACATAACGCCTGCTAAATTATGAGTATTTTCTAAAc > 1:388563/1‑143 (MQ=255) gggttCGCGTGCGGCTTATTGCCCACCGTTTGGCTTCGGTCAACCTTTCACTTGATCCGTCCGCGCCGAAACTTCAATAAATCTTATGCAGAGTCACCCCTTCGTCCTTCACGCCTGCTAAATTATGAGTATTTTCTAAACCg < 2:483809/140‑1 (MQ=255) tttCGCGAGCGGCTTATTGCCCACCGTTTGGCTTCGGTCAATCTGTCACGTTTACCTTACGAGCCCAAACTTAAATAAAACTTATACAGAGTTACACTTTCTTACATAACGCCTGCTAAATTATGAGTATTTTCTAAACCGCa < 2:466807/143‑1 (MQ=255) cgCGGCTTATTGCCCACCGTTTGGCTTCGGTCAATCTGTCACGTTTACCTTACGAGCCCAAACTTAAATAAAACTTATACAGAGTTACACTTTCTTACATAACGCCTGCTAAATTATGAGTATTTTCTAAACCGCACTCATaa < 1:492352/142‑1 (MQ=255) gCTCATTGCCCACCGTTTGGCTGCGGTCAATCTGTCACGTTTACCTTACGAGCCCAAACTTAAATAAAACTTATACAGAGTTACACTTTCTTACATAACGCCTGCTAAATTATGAGTATTTTCTAAACCGCACTCATAATTTg < 2:229022/143‑1 (MQ=255) ttATTGCCCACCGTTGGGCTTCGGTCAATCTGTCACGTTTACCTTACGAGCCCAAACTTAAATAAAACTTATACAGAGTTACACTTTCTTACATAACGCCTGCTAAATTATGAGTATTTTCTAAACCGCACTCATAATTTGCa < 2:82091/143‑1 (MQ=255) gtATTTCCCACCGTTTGGCTTCGGTCAATCTGTCACGTTTACCTTACGAGCCCAAACTTAAATAAAACTTATACAGAGTTACACTTTCTTACATAACGCCTGCTAAATTATGAGTATTTTCTAAACCGCACTCATAATTTGCa < 2:651246/142‑1 (MQ=255) gtATTGCCCGCCGTTTGTGTTCGGTCAATCTGTCACGTTTACCTTACGAGCCCAAACTTAAATAAAACTTATACAGAGTTACACTTTCTTACATAACGCCTGCTAAATTATGAGTATTTTCTAAACCGCACTCATAATTTGCa < 2:79678/142‑1 (MQ=255) ccACCGTTTGGCTTCGGTCAATCTGTCACGTTTACCTTACGAGCCCAAACTTAAATAAAACTTATACAGAGTTACACTTTCTTACATAACGCCTGCTAAATTATGAGCATTTTCTAAACGTCATTCATAATTGGCAGCCAttt > 1:707551/1‑143 (MQ=255) ccGTTTGGCTTCGGTCAATCTGTCACGTTTACCTTACGAGCCCAAACTTAAATAAAACTTATACAGAGTTACACTTTCTTACATAACGCCTGCTAAATTATGAGTATTTTCTAAACCGCACTCATAATTTGCAGTCATTTTGa < 2:538124/143‑1 (MQ=255) tttGGCTTCGGTCAATCTGTCACGTTTACCTTACGAGCCCAAACTTAAATAAAACTTATACAGAGTTACACTTTCTTACATAACGCCTGCTAAATTATGAGTATTTTCTAAACCGCACTCATAATTTGCAGTCATTTTGaaaa > 1:241265/1‑143 (MQ=255) tttGGCTTCGGTCAATCTGTCACGTTTACCTTACGAGCCCAAACTTAAATAAAACTTATACAGAGTTACACTTTCTTACATAACGCCTGCTAAATTATGAGTATTTTCTAAACCGCACTCATAATTTGCAGTCATTTTGaaaa < 1:528251/143‑1 (MQ=255) gCTTCTGTCAATCTTTCACTTTTACCTTACGAGTACCAGCTTAGATAGAACTGATACAGAGTTACACTTTATTACATAACGCCTGCTAAATTATGAGTATTTTCTAAACCGCACTCATAATTTGCAGTCATTTTGAAAAGGaa < 2:252104/143‑1 (MQ=255) ttCGGTCAATCTGTCACGTTTACCTTACGAGCCCAAACTTAAATAAAACTTATACAGAGTTACACTTTCTTACATAACGCCTGCTAAATTATGAGTATTTTCTAAACCGCACTCATAATTTGCAGTCATTTTGAAAAGGAAGt > 1:208827/1‑143 (MQ=255) ggTCAATCTGTCACGTTTACCTTACGAGCCCAAACTTAAATAAAACTTATACAGAGTTACACTTTCTTACATAACGCCTGCTAAATTATGAGTATTTTCTAAACCGCACTCATAATTTGCAGTCATTTTGAAAAGGCAGCCAt > 1:183064/1‑143 (MQ=255) tCAATCTGTCACGTTTACCTTACGAGCCCAAACTTAAATAAAACTTATACAGAGTTACACTTTCTTACATAACGCCTGCTAAATTATGAGTATTTTCTAAACCGCACTCATAATTTGCAGTCATTTTGAAAAGGAAGTCATTa < 1:109094/143‑1 (MQ=255) tCAATCTGTCACGTTTACCTTACGAGCCCAAACTTAAATAAAACTTATACAGAGTTACACTTTCTTACATAACGCCTGCTAAATTATGAGTATTTTCTAAACCGCACTCATAATTTGCAGTCATTTTGAAAAGGAAGTCATTa < 1:235084/143‑1 (MQ=255) gTCACGTTTACCTTACGAGCCCAAACTTAAATAAAACTTATACAGAGTTACACTTTCTTACATAACGCCTGCTAACTCATCAGTATTTTCTAAACCGCACTCATAATTTGCAGTCATTTTGAAAAGGAAGTCATTATGTCGtt < 1:572050/143‑1 (MQ=255) cACGTTTACCTTACGAGCCCAAACTTAAATAAAACTTATACAGAGTTACACTTTCTTACATAACGCCTGCTAAATTATGAGTATTTTCTAAACCGCACTCATAATTTGCAGTCATTTTGAAAAGGAAGTCATTATGTCGTTCt < 1:358435/143‑1 (MQ=255) aCGTTTACCTTACGAGCCCAAACTTAAATAAAACTTATACAGAGTTACACTTTCGTACATAACGCCTGCTAAATTATGAGTAGTTTCTAAACCGCACTCATAATTTGCAGTCATTTTGAAAAGGAAGTCATTATGTCGTTCTg < 2:332796/143‑1 (MQ=255) ttACCTTACGAGTCCAAACTTAAATAAAACTTATACAGAGTTACACTTTCTTACATAACGCCTGCTAAATTATGAGTATTTTCTAAACCGCACTCATAATTTGCAGTCATTTTGAAAAGGAAGTCATTATGTCGTTCTGGaaa < 2:453213/143‑1 (MQ=255) tACCTTACGAGCCCAAACTTAAATAAAACTTATACAGAGTTACACTTTCTTACATAACGCCTGCTAAATTATGAGTATTTTCTAAACCGCACTCATAATTTGCAGTCATTTTGAAAAGGAAGTCATTATGTCGTTCTGGAAAg < 2:310556/143‑1 (MQ=255) aaCTTAAATAAAACTTATACAGAGTTACACTTTCTTACATAACGCCTGCTAAATTATGAGTATTTTCTAAACCGCACTCATAATTTGCAGTCATTTTGAAAAGGAAGTCATTATGTCGTTCTGGAAAGTTGCAGCAGCGCAat < 1:661906/143‑1 (MQ=255) aaCTTAAATAAAACTTATACAGAGTTACACTTTCTTACATAACGCCTGCTAAATTATGAGTATTTTCTAAACCGCACTCATAATTTGCAGTCATTTTGAAAAGGAAGTCATTATGTCGTTCTGGAAAGTTGCAGCAGCGCAat < 1:160835/143‑1 (MQ=255) taaataaaACTTATACAGAGTTACACTTTCTTACATAACGCCTGCTAAATTATGAGTATTTTCTAAACCGCACTCATAATTTGCAGTCATTTTGAAAAGGAAGTCATTATGTCGTTCTGGAAAGTTGCAGCAGCGCAATATGa < 2:337807/143‑1 (MQ=255) aatcaaACTTAGACAGAGTTACTCTTTCTTACATACCGCCTGCTAAATTATGAGTATGTTCTAAACCGCACTCGTAATTTGCAGTCATTTTGAAAAGGAAGTCATTATGTCGTTCTGGAAAGTTGCAGCAGCGACAGATGAGc < 2:487353/143‑1 (MQ=255) ataaaACTTATACAGAGTTACACTTTCTTACATAACGCCTGCTAAATTATGAGTATTTTCTAAACCGCACTAATAATTTCCAGTCACTTGGAACAGACAGACCGTAGTTCGTTCTGGAAAGTTGCAACCGCGCGATATGAgga > 2:11898/1‑141 (MQ=255) taaaACTTATACAGAGTTACACCTTCTTACATAACGCCTGCTAAATTATGAGTATTTTCTAAACCGCACTCATAATTTGCACTCATTTTGAAAAGGAACTCATTATGTCGCTCTGGAAAGTTGCAGCAGCGCAATATGAGccg > 2:641745/1‑142 (MQ=255) aaaaCTGATACAGAGTTACGCTCACTTACAGAACGCCGGATAAATTATGAGTATTTTCTAAACCGCACTCATAATTTGCAGTCATTTTGAAAAGGAAGTCATTATGTCGTTCTGGAAAGTTGCAGCAGCGCAATATGAGCCTc < 1:455114/143‑1 (MQ=255) ttATACAGAGTTACACTTTCTTACATAACGCCTGCTAAATTATGAGTATTTTCTAAACGGCACTCATAATTTGCAGTCATTTTGAAAAGGAAGTCATTATGTCGTTCTGGAAAGTTGCAGCAGCGCAATATGAGCCGCGTaaa > 2:662871/1‑143 (MQ=255) ttATACAGAGTTACACTTTCTTACATAACGCCTGCTAAATTATGAGTATTTTCTAAACCGCACTCATAATTTGCAGTCATTTTGAAAAGGAAGTCATTATGTCGTTCTGGAAAGTTGCAGCAGCGCAATATGAGCCTCGTaaa < 1:265041/143‑1 (MQ=255) ctataCAGAGTTACACTTTCTTACATAACGCCTGCTAAATTATGAGTATTTTCTAAACCGCACTCATAATTTGCAGTCATTTTGAAAAGGAAGTCATTATGTCGTTCTGGAAAGTTGCAGCAGCGCAATATGAGCCTCGTaaa < 1:151563/142‑1 (MQ=255) ataCAGGGTTAAACTTTCTTACATAACGGTTGATAAATTATGAGTATTTTCTAAACCGCACTCATAATTTGCAGTCATTTTGAAAAGGAAGTCATTATGTCGTTCTGGAAAGTTGCAGCAGCGCAATATGAGCCTCGTAAAAc < 2:276300/143‑1 (MQ=255) ataCAGAGTTACACTTTCTTACATAACGCCTGCTAAATTATGAGTATTTTCTAAACCGCACTCATAATTTGCAGTCATTTTGAAAAGGAAGTCATTATGTCGTTCTGGAAAGTTGCAGCAGCGCAATATGAGCCTCGTAAAAc < 2:208827/143‑1 (MQ=255) cgagTTACACTTTCTTACATAACGCCTGCTAAATTATGAGTATTTTCTAAACCGCACTCATAATTTGCAGTCATTTTGAAAAGGAAGTCATTATGTCGTTCTGGAAAGTTGCAGCAGCGCAATATGAGCCTCGTAAAACctca < 1:60542/142‑1 (MQ=255) agTTACACCTCCTTACATAACGCCTGCTAAATTATGAGTATTTTCTAGACCGCACTCATAATTTGCAGTCAGCGTGAAAAGGAAGTCATTATGTCGTTCTGGAAAGTTGCAGCAGCGCAATATGAGCCTCGTAAAACctcact < 1:27667/143‑1 (MQ=255) acTTTCTTACATAACGCCTGCTAAATTATGAGTATTTTCTAAACCGCACTCATAATTTGCAGTCATTTTGAAAAGGAAGTCATTATGTCGTTCTGGAAAGTTGCAGCAGCGCAATATGATCCTCGTAAAACCTCACTCACCGa > 1:368865/1‑143 (MQ=255) acTTTCTTACATAACGCCTGCTAAATTATGAGTATTTTCTAAACCGCACTCATAATTTGCAGTCATTTTGAAAAGGAAGTCATTATGTCGTTCTGGAAAGTTGCAGCAGCGCAATATGAGCCTCGTAAAACCTCACTCCCCGa > 2:480714/1‑143 (MQ=255) tttCTTACATAACGCCTGCTAAATTATGAGTATTTTCTAAACCGCACTCATAATTTGCAGTCATTTTGAACACGAAGTCATTATGTCGTCCTGGCAACTTGCATCAGCGCAAAATGATCCCCGTCAAACCTCACTCACCGCAc > 2:251612/1‑143 (MQ=255) tCTTACATAACGCCTGCTAAATTATGAGTATTTTCTAAACCGCACTCATAATTTGCAGTCATTTTGAAAAGGAAGTCATTATGTCGTTCTGGAAAGTTGCAGCAGCGCAATATGAGCCTCGTAAAACCTCACTCACCGAACAg > 1:293820/1‑143 (MQ=255) tAAATTATGAGTATTTTCTAAACCGCACTCATAATTTGCAGTCATTTTGAAAAGGAAGTCATTATGTCGTTCTGGAACGTTGAAGTAGCGCATTATGAGCCTCGTAAAACCTCACTCACCGAACAGGTAGCTCATCATCTGGa > 1:533985/1‑143 (MQ=255) ttATGAGTATTTTCTAAACCGCACTCATAATTTGCAGTCATTTTGAAAAGGAAGTCATTATGTCGTTCTGGAAAGTTGCAGCAGCGCAATATGAGCCTCGTAAAACCTCACTCACCGAACAGGTAGCTCATCATCTGGAGttt > 1:434116/1‑143 (MQ=255) aTGAGTATTTTCTAAACCGCACTCATAATTTGCAGTCATTTTGAAAAGGAAGTCATTATGTCGTTCTGGAAAGTTGCAGCAGCGCAATATGAGCCTCGTAAAACCTCACTCACCGAACAGGTAGCTCATCATCTGGAGTTtgt > 1:208348/1‑143 (MQ=255) tATTTTCTAAACCGCACTCATAATTTGCAGTCATTTTGAAAAGGAAGTCATTATGTCGTTCTGGAAAGTTGCAGCAGCGCAATATGAGCCTCGTAAAACCTCACTCACCGAACAGGTAGCTCATCCTCCGGAGTTCGTGAggg > 2:63975/1‑143 (MQ=255) tATTTTCTAAACCGCACGCATAATTGGCAGTCATTTTGAAAAGGAAGTCATTATGTCGTTCTGGAAAGTTGCAGCAGCGCAATATGAGCCTCGTAAAACCTCACTCACCGAACAGGTAGCTCATCATCTGGAGTTTGTGAggg < 1:347969/143‑1 (MQ=255) | ATTTGCGCAGCTGGTTTCGCGAGCGGCTTATTGCCCACCGTTTGGCTTCGGTCAATCTGTCACGTTTACCTTACGAGCCCAAACTTAAATAAAACTTATACAGAGTTACACTTTCTTACATAACGCCTGCTAAATTATGAGTATTTTCTAAACCGCACTCATAATTTGCAGTCATTTTGAAAAGGAAGTCATTATGTCGTTCTGGAAAGTTGCAGCAGCGCAATATGAGCCTCGTAAAACCTCACTCACCGAACAGGTAGCTCATCATCTGGAGTTTGTGAGGG > NC_000913/1925247‑1925530 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |