New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	4584201 =	26 (0.640)	3 (0.080)	3/272	6.0	10.0%	coding (2561/3513 nt)	hsdR	endonuclease R Type I restriction enzyme
	?	NC_000913	4584215 =	29 (0.750)					coding (2547/3513 nt)	hsdR	endonuclease R Type I restriction enzyme
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TGCGGCCATCCGCTTCGGTGATTTTATAGGTTTCTGAATCGGTAATTTCATTGACCAGCGTTTGCAGTTCCACCTTCGGGCGCACCACCACCGGACGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAAATCTTAAAGCTGGTTTTATTCACCTCCGGGCATAAGCGCGTGGCGCGGCCTTTCATCTGTTCGTACAGAATGCGGCTGCGTACTTTACGCAGGAACACGA  >  NC_000913/4584094‑4584339                                                                                                            |                                                                                                                                           tGCGGCCATCCGCTTCGGTGATTTTATAGGTTTCTGAATCGGTAATTTCATTGACCAGCGTTTGCAGTTCCACCTTCGGGCGCACCACCACCGGACGCATGGTGTCGACCCGCGCCACCGCGCTGTAGATATCGACACAGTCa                                                                                                         >  2:514173/1‑143 (MQ=255)      ccATCCGCTTCGGTGATTTTATAGGTTTCTGAATCGGTAATTTCATTGACCAGCGTTTGCAGTTCCACCTCCGGGCGCACCACCACCGGACGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAAAt                                                                                                    <  1:556131/143‑1 (MQ=255)       cagacGCTTCGGTGATTCTATAGGTTGCTGAATCGGTAATTTCAGTGACCAGCGTGTGCAGTTCCACCTTCGGGCGCACCACCACCGGACGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAAATc                                                                                                   <  1:53397/139‑1 (MQ=255)        aTCCGCTTCGGTGATTTTATAGGTTTCTGAATCGGTAATTTCATTGACCAGCGTTTTCAGTTCCACCTTCGGGCGCACCACCACCGGGCGCATGGTGTCGACGCTCTCCAGCGTGCTGTGGATATCGACACAGTCAAACATCt                                                                                                  >  1:17083/1‑143 (MQ=255)        aTCCGCTTCGGTGATTTTATAGGTTTCTGAATCGGTAATTTCATTGACCAGCGTTTGCAGTTCCACCTTCGGGCGCACCACCACCGGACGCATGATGTCGCCGCTCTCCATCGTGCTGTTGATAGAGTACCAGTCAAAAATcg                                                                                                  >  2:164064/1‑142 (MQ=255)         tCCGCTTCAGTGATTTTATAGGTTTCTGAATCGGTAATTTCATTGACCAGCGTTTGCAGTTCCACCTTCGGGCGCACCACCACCGGACGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAAATCtt                                                                                                 <  1:42548/143‑1 (MQ=255)                cGGTGATTTTATAGGTTTCTGAACCGGTAATTTCATTGACCAGCGTTTGCAGTTCCACCTTCGGGCGCACCACCACCGGACGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAAATCTTAAAGCTg                                                                                          <  1:131265/143‑1 (MQ=255)                     aTTTTATCGGTTTCTGAATCGGTAATTTCATTGACCAGCGTTTGCAGTTCCACCTTCGGGCGCACCACCACCGGACGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAAATCTTAAAGCTGGtttt                                                                                     <  1:523147/143‑1 (MQ=255)                        ttATAGGTGTCTGAATCGGTAATTTCATTGACCAGCGTTTGCAGTTCCACCTTCGGGCGCACCACCACCGGACGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAAATCTTAAAGCTGGTTTTAtt                                                                                  <  2:96726/143‑1 (MQ=255)                              gTTTCTGAATCGGTAATTTCATTGACCAGCGTTTGCAGTTCCACCTTCGGGCGCACCACCACCGGCCGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAAATCTTCAAGCTGGTTTTCTTCGCCTc                                                                            >  1:364473/1‑143 (MQ=255)                                ttCTGAATCGGTAATTTCATTGACCAGCGTTTGCAGTTCCACCTTCGGGCGCACCACCACCGGACGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACCGTCAAACATCTTAAAGCTGGTTTTATTCACCTCCg                                                                          >  1:489478/1‑143 (MQ=255)                                          gTAATTTCATTGACCAGCGTTTGCAGTTCCACCTTCGGGCGCACCACCACCGGGCGCATGGTGTCCACGCTCTCCAGCGTGCGGTGGATACCGACACAGTCACGCCTCTTAAACCTGGTGTCAACCACACCCGGGCATacccc                                                                >  2:56451/1‑139 (MQ=255)                                          gTAATTTCATTGACCAGCGTTTGCAGTTCCACCTTCGGGCGCACCACCACCGGACGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAAATCTTAAAGCTGGTTTTATTCACCTCCGGGCATAcgcg                                                                >  2:679248/1‑143 (MQ=255)                                                  aTTGACCAGCGTTTGCATCTCCACCTTCGGGCGCACCACCACCGGACGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAAATCTTAAAGCTGGTTTTATTCACCTCCGGGCATAAGCGCGTGgcgc                                                        <  1:46732/143‑1 (MQ=255)                                                   ttGACCAGCGTTTGCAGTTCCACCTTCGGGCGCACCACCCCCGGACGCATGGTGTCGACGCTCTCCAGCGGGCTGTAGATATCGACACAGTCAAAAATCTTAAAGCTGGTTTTATTCACCTCCGGGCCTACGCGCGTGGcgcg                                                       >  1:78970/1‑143 (MQ=255)                                                   ttGACCAGCGTTTGCAGTTCCACCTTCGGGCGCACCACCACCGGACGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAAATCTTAAAGCTGGTTTTATTCACCTCCGGGCATGAGCGCGTGGcgcg                                                       >  1:388235/1‑143 (MQ=255)                                                          gCGTTTGCAGTTCCACCTTCGGGCGCACCACCACCGGACGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAACTCTTAAAGCTGGTTTTCTGCACCGCCGTGCATCAGCGCGTGGCGCGGCCTTTc                                                >  1:304011/1‑143 (MQ=255)                                                            gTTTGCAGTTCCACCTTCGGGCGCACCACCACCGGACGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAAATCTTAAAGCTGGTTTTATTCACCTCCGGGCATAAGCGCGTGGCGCGGCCTTTCAt                                              <  1:423910/143‑1 (MQ=255)                                                                  aGTTCCACCTTCGGGCGCACCACCACCGGACGCATGGTGTCGACGCTCTCGAGCGTGCTGTAGATATCGACACAGTCAAAAATCTTAAAGCTGGTTTTATTCACCTCCGGGCATAAGCGCGTGGCGCGGCCTTTCATCTGTTc                                        <  1:594964/143‑1 (MQ=255)                                                                  aGTTCCACCTTCGGGCGCACCACCACCGGACGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAAATCTTAAAGCTGGTTTTATTTTCCGCTGGGGATAGGGGCGAGGCGCGGCCTTTCTTCTGTTc                                        >  1:455444/1‑143 (MQ=255)                                                                  aGTTCCACCTGCGGGCGCGCCACCACCGGACGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAAATCTTAAAGCTGGTTTTATTCACCTCCGGGCATAAGCGCGTGGCGCGGCCTTTCATCTGTTc                                        <  1:499839/143‑1 (MQ=255)                                                                               ggCGCACCACCACCGGACGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAAATCTTAAAGCTGGTTTTATTCACCTCCGGGCATAAGCGCGTGGCGCGGCCTTTCATCTGTTCGTACAGAATGCgg                           <  1:560808/143‑1 (MQ=255)                                                                                   caccaccacCGGACGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAAATCTTAAAGCTGGTTTTATTCACCTCCGGGCATAAGCGCGTGGCGCGGCCTTTCATCTGTTCGTACAGAATGCGGCTGc                       <  1:630175/143‑1 (MQ=255)                                                                                          accGGACGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAAATCTTAAAGCTGGTTTTATTCACCTCCGGGCATAAGCGCGTGGCGCGGCCTTTCATCTGTTCGTACAGAATGCGGCTGCGTACttt                <  2:337919/143‑1 (MQ=255)                                                                                             ggACGCAGGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAAATCTTAAAGCTGGTTTTATTCACCTCCGGGCATAAGCGCGTGGCGCGGCCTTTCATCTGTTCGTACAGAATGCGGCTGCGTACTTTACg             <  1:277443/143‑1 (MQ=255)                                                                                                        gccGACGCGCGCCAGCGTGCTGTAGATATCGACACAGTCAAAAATCTTAAAGCTGGTGTTATTCACCTCCGGGCCTAAGCGCGTGGCGCGGCCTTTCATCTGTTCGTACAGAATGCGGCTGAGTACTTGACGCAGGAACACGa  <  2:262001/141‑1 (MQ=255)                                                                                                            |                                                                                                                                           TGCGGCCATCCGCTTCGGTGATTTTATAGGTTTCTGAATCGGTAATTTCATTGACCAGCGTTTGCAGTTCCACCTTCGGGCGCACCACCACCGGACGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAAATCTTAAAGCTGGTTTTATTCACCTCCGGGCATAAGCGCGTGGCGCGGCCTTTCATCTGTTCGTACAGAATGCGGCTGCGTACTTTACGCAGGAACACGA  >  NC_000913/4584094‑4584339

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.