New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	4584201 =	26 (0.640)	3 (0.080)	3/272	6.0	10.0%	coding (2561/3513 nt)	hsdR	endonuclease R Type I restriction enzyme
	?	NC_000913	4584215 =	29 (0.750)					coding (2547/3513 nt)	hsdR	endonuclease R Type I restriction enzyme
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TGCGGCCATCCGCTTCGGTGATTTTATAGGTTTCTGAATCGGTAATTTCATTGACCAGCGTTTGCAGTTCCACCTTCGGGCGCACCACCACCGGACGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAAATCTTAAAGCTGGTTTTATTCACCTCCGGGCATAAGCGCGTGGCGCGGCCTTTCATCTGTTCGTACAGAATGCGGCTGCGTACTTTACGCAGGAACACGATATTACAGATCGAC  >  NC_000913/4584094‑4584353                                                                                                                          |                                                                                                                                           tGCGGCCATCCGCTTCGGTGATTTTATAGGTTTCTGAATCGGTAATTTCATTGACCAGCGTTTGCAGTTCCACCTTCGGGCGCACCACCACCGGACGCATGGTGTCGACCCGCGCCACCGCGCTGTAGATATCGACACAGTCa                                                                                                                       >  2:514173/1‑143 (MQ=255)      ccATCCGCTTCGGTGATTTTATAGGTTTCTGAATCGGTAATTTCATTGACCAGCGTTTGCAGTTCCACCTCCGGGCGCACCACCACCGGACGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAAAt                                                                                                                  <  1:556131/143‑1 (MQ=255)       cagacGCTTCGGTGATTCTATAGGTTGCTGAATCGGTAATTTCAGTGACCAGCGTGTGCAGTTCCACCTTCGGGCGCACCACCACCGGACGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAAATc                                                                                                                 <  1:53397/139‑1 (MQ=255)        aTCCGCTTCGGTGATTTTATAGGTTTCTGAATCGGTAATTTCATTGACCAGCGTTTTCAGTTCCACCTTCGGGCGCACCACCACCGGGCGCATGGTGTCGACGCTCTCCAGCGTGCTGTGGATATCGACACAGTCAAACATCt                                                                                                                >  1:17083/1‑143 (MQ=255)        aTCCGCTTCGGTGATTTTATAGGTTTCTGAATCGGTAATTTCATTGACCAGCGTTTGCAGTTCCACCTTCGGGCGCACCACCACCGGACGCATGATGTCGCCGCTCTCCATCGTGCTGTTGATAGAGTACCAGTCAAAAATcg                                                                                                                >  2:164064/1‑142 (MQ=255)         tCCGCTTCAGTGATTTTATAGGTTTCTGAATCGGTAATTTCATTGACCAGCGTTTGCAGTTCCACCTTCGGGCGCACCACCACCGGACGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAAATCtt                                                                                                               <  1:42548/143‑1 (MQ=255)                cGGTGATTTTATAGGTTTCTGAACCGGTAATTTCATTGACCAGCGTTTGCAGTTCCACCTTCGGGCGCACCACCACCGGACGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAAATCTTAAAGCTg                                                                                                        <  1:131265/143‑1 (MQ=255)                     aTTTTATCGGTTTCTGAATCGGTAATTTCATTGACCAGCGTTTGCAGTTCCACCTTCGGGCGCACCACCACCGGACGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAAATCTTAAAGCTGGtttt                                                                                                   <  1:523147/143‑1 (MQ=255)                        ttATAGGTGTCTGAATCGGTAATTTCATTGACCAGCGTTTGCAGTTCCACCTTCGGGCGCACCACCACCGGACGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAAATCTTAAAGCTGGTTTTAtt                                                                                                <  2:96726/143‑1 (MQ=255)                              gTTTCTGAATCGGTAATTTCATTGACCAGCGTTTGCAGTTCCACCTTCGGGCGCACCACCACCGGCCGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAAATCTTCAAGCTGGTTTTCTTCGCCTc                                                                                          >  1:364473/1‑143 (MQ=255)                                ttCTGAATCGGTAATTTCATTGACCAGCGTTTGCAGTTCCACCTTCGGGCGCACCACCACCGGACGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACCGTCAAACATCTTAAAGCTGGTTTTATTCACCTCCg                                                                                        >  1:489478/1‑143 (MQ=255)                                          gTAATTTCATTGACCAGCGTTTGCAGTTCCACCTTCGGGCGCACCACCACCGGGCGCATGGTGTCCACGCTCTCCAGCGTGCGGTGGATACCGACACAGTCACGCCTCTTAAACCTGGTGTCAACCACACCCGGGCATacccc                                                                              >  2:56451/1‑139 (MQ=255)                                          gTAATTTCATTGACCAGCGTTTGCAGTTCCACCTTCGGGCGCACCACCACCGGACGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAAATCTTAAAGCTGGTTTTATTCACCTCCGGGCATAcgcg                                                                              >  2:679248/1‑143 (MQ=255)                                                  aTTGACCAGCGTTTGCATCTCCACCTTCGGGCGCACCACCACCGGACGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAAATCTTAAAGCTGGTTTTATTCACCTCCGGGCATAAGCGCGTGgcgc                                                                      <  1:46732/143‑1 (MQ=255)                                                   ttGACCAGCGTTTGCAGTTCCACCTTCGGGCGCACCACCCCCGGACGCATGGTGTCGACGCTCTCCAGCGGGCTGTAGATATCGACACAGTCAAAAATCTTAAAGCTGGTTTTATTCACCTCCGGGCCTACGCGCGTGGcgcg                                                                     >  1:78970/1‑143 (MQ=255)                                                   ttGACCAGCGTTTGCAGTTCCACCTTCGGGCGCACCACCACCGGACGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAAATCTTAAAGCTGGTTTTATTCACCTCCGGGCATGAGCGCGTGGcgcg                                                                     >  1:388235/1‑143 (MQ=255)                                                          gCGTTTGCAGTTCCACCTTCGGGCGCACCACCACCGGACGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAACTCTTAAAGCTGGTTTTCTGCACCGCCGTGCATCAGCGCGTGGCGCGGCCTTTc                                                              >  1:304011/1‑143 (MQ=255)                                                            gTTTGCAGTTCCACCTTCGGGCGCACCACCACCGGACGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAAATCTTAAAGCTGGTTTTATTCACCTCCGGGCATAAGCGCGTGGCGCGGCCTTTCAt                                                            <  1:423910/143‑1 (MQ=255)                                                                  aGTTCCACCTTCGGGCGCACCACCACCGGACGCATGGTGTCGACGCTCTCGAGCGTGCTGTAGATATCGACACAGTCAAAAATCTTAAAGCTGGTTTTATTCACCTCCGGGCATAAGCGCGTGGCGCGGCCTTTCATCTGTTc                                                      <  1:594964/143‑1 (MQ=255)                                                                  aGTTCCACCTTCGGGCGCACCACCACCGGACGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAAATCTTAAAGCTGGTTTTATTTTCCGCTGGGGATAGGGGCGAGGCGCGGCCTTTCTTCTGTTc                                                      >  1:455444/1‑143 (MQ=255)                                                                  aGTTCCACCTGCGGGCGCGCCACCACCGGACGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAAATCTTAAAGCTGGTTTTATTCACCTCCGGGCATAAGCGCGTGGCGCGGCCTTTCATCTGTTc                                                      <  1:499839/143‑1 (MQ=255)                                                                               ggCGCACCACCACCGGACGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAAATCTTAAAGCTGGTTTTATTCACCTCCGGGCATAAGCGCGTGGCGCGGCCTTTCATCTGTTCGTACAGAATGCgg                                         <  1:560808/143‑1 (MQ=255)                                                                                   caccaccacCGGACGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAAATCTTAAAGCTGGTTTTATTCACCTCCGGGCATAAGCGCGTGGCGCGGCCTTTCATCTGTTCGTACAGAATGCGGCTGc                                     <  1:630175/143‑1 (MQ=255)                                                                                          accGGACGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAAATCTTAAAGCTGGTTTTATTCACCTCCGGGCATAAGCGCGTGGCGCGGCCTTTCATCTGTTCGTACAGAATGCGGCTGCGTACttt                              <  2:337919/143‑1 (MQ=255)                                                                                             ggACGCAGGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAAATCTTAAAGCTGGTTTTATTCACCTCCGGGCATAAGCGCGTGGCGCGGCCTTTCATCTGTTCGTACAGAATGCGGCTGCGTACTTTACg                           <  1:277443/143‑1 (MQ=255)                                                                                                        gccGACGCGCGCCAGCGTGCTGTAGATATCGACACAGTCAAAAATCTTAAAGCTGGTGTTATTCACCTCCGGGCCTAAGCGCGTGGCGCGGCCTTTCATCTGTTCGTACAGAATGCGGCTGAGTACTTGACGCAGGAACACGa                <  2:262001/141‑1 (MQ=255)                                                                                                                tctcCAGCGTGCTGTAGATATCGACACAGTCAAAAATCTTAAAGCTGGTTTTATTCACCTCCGGGCATAAGCGCGTGGCGCGGCCTTTCATCTGTTCGTACAGAATGCGGCTGCGTACTTTACGCAGGAACACGATATTACAg        <  1:421895/143‑1 (MQ=255)                                                                                                                 ctcCAGCGTGCTGTAGATATCGACACAGTCAAAAATCTTAAAGCTGGTTTTATTCACCTCCGGGCATAAGCGCGTGGCGCGGCCTTTCATCTGTTCGTACAGAATGCGGCTGCGTACTTTACGCAGGAACACGATATTACAGa       >  2:32266/1‑143 (MQ=255)                                                                                                                  tcCAGCGTGCTGTAGATCTCGACACAGTCAAAAATCTTCAAGCTGGTTTTATTCACCTCCGGGCATCAGCGCGTGGCGCGGCCTTTCATCTGTTCGAAACGATTGCGGCTTCGTACTTTACGCAGGAACACGATATTACAGAt      <  2:717459/143‑1 (MQ=255)                                                                                                                      gCGTGCTGTAGATATCGACACAGTCAAAAATCTTAAAGCTGGTTTTATTCACCTCCGGGCATAAGCGCGTGGCGCGGCCTTTCATCTGTTTGTACAGAATGCGGCTGCGTACTTTACGCAGGAACACGATATTACAGATCGAc  <  1:419336/143‑1 (MQ=255)                                                                                                                          |                                                                                                                                           TGCGGCCATCCGCTTCGGTGATTTTATAGGTTTCTGAATCGGTAATTTCATTGACCAGCGTTTGCAGTTCCACCTTCGGGCGCACCACCACCGGACGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAAATCTTAAAGCTGGTTTTATTCACCTCCGGGCATAAGCGCGTGGCGCGGCCTTTCATCTGTTCGTACAGAATGCGGCTGCGTACTTTACGCAGGAACACGATATTACAGATCGAC  >  NC_000913/4584094‑4584353

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.