| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 1,646,088 | Δ14 bp | coding (192‑205/306 nt) | ydfV → | Qin prophage; uncharacterized protein |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 1646088 | 1646101 | 14 | 61 [0] | [0] 61 | ydfV | Qin prophage; uncharacterized protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1646087 | 0 (0.000) | 61 (1.100) | 55/278 | 0.0 | 100% | coding (191/306 nt) | ydfV | Qin prophage; uncharacterized protein |
| ? | NC_000913 | 1646102 = | 0 (0.000) | coding (206/306 nt) | ydfV | Qin prophage; uncharacterized protein | |||||
GTCGTAAGAACGGTGATCACTGTCCGCTTTGTGCCAGGAGCAGCCATTGCTAAGTCCATCCTGTATTGTGCAGGTCAGCTCGTTTTTAAAGAGTCCGGCCATCATCTTACTGGTACAGACACCATATACTTTGTGACGGTCAGGCTACATATGCACAACTCAACTTATTCATCTATTTTTTGCTTTAGCATGTCAGTGTTGCTTTCTCGTCGGCGGGTGAGCGGTGACCTGACCTGTCGATAAAGGAACGTAACACGTTTTATGCAACACCCGCATGCGGCA > NC_000913/1645960‑1646241 | gaagtcagaaagtagtcgtaagaacggtgatcactgtccgctttgtgccaggagcagccattgctaagtccatcctgtattgtgcaggtcagctcgtttttaaagagtccggccatcatcttactggtacagacaccatatag < 1:978045‑M2/1‑1 (MQ=255) gtcagatagtagtcgtaagaacggtgatcactgtccgctttgtgccaggagcagccattgctaagtccatcctgtattgtgcaggtcagctcgtttttaaagagtccggccatcatcttactggtacagacaccatataGGCt < 2:623800‑M2/4‑1 (MQ=255) gtcagaaagtagtcgtaagaacggtgatcactgtccgctttgtgccaggagcagccattgctaagtccatcctgtattgtgcaggtcggctcgtttttaaagagtccggccatcatcttactggtacagacaccatataGGCt > 2:625358‑M2/140‑143 (MQ=255) tcggaaagtaggcgtacgaacggtgatcactgtccgcgttgtgccaggagcagccattgctaagtccatcctgtattgtgcaggtcagctcgtttttaaagagtccggccatcatcttactggtacagacaccatataGGCTa < 2:432620‑M2/5‑1 (MQ=255) tcagaaagtagtcgtaagaacggtgatcactgtccgctttgtgccaggagcagccattgctaagtccatcctgtattgtgcaggtcagctcgtttttaaagagtccggccatcatcttactggtacagacaccatataGGCTa > 1:443492‑M2/139‑143 (MQ=255) gaaagtagtcgtaagaacggtgatcactgtccgctttgtgccaggagcagccattgctaagtccatcctgtattgtgcaggtcagctcgtttttaaagagtccggccatcatcttactggtacagacaccatataGGCTACat < 1:820337‑M2/8‑1 (MQ=255) aaagtagtcgtaagaacggtgatcactgtccgctttgtgccaggagcagccattgctaagtacatcctgtattgtgcaggtcagctcgtttttaaagagtccggccatcatcttactggtacagacaccatataGGCTACata > 1:419201‑M2/135‑143 (MQ=255) tagtcgtaagaacggtgatcactgtccgctttgtgccaggagcagccattgctaagtccatcctgtattgtgcaggtcagctcgtttttaaagagtccggccatcatcttactggtacagacaccatataGGCTACATATGca < 1:572924‑M2/13‑1 (MQ=255) gaacggtgatcactgtccgctttgtgccaggagcagccattgctaagtccatcctgtattgtgcaggtcagctcgtttttaaagagtccggccatcatcttactggtacagacaccatataGGCTACATATGCAcaactcaac < 2:443492‑M2/22‑1 (MQ=255) gtgatcactgtccgctttgtgccaggagcagccattgctaagtccatcctgtattgtgcaggtcagctcgtttttaaagagtccggccatcatcttactggtacagacaccatataGGCTACATATGCACAACTCAACttact > 2:75890‑M2/117‑141 (MQ=255) gcgacccctgtccgctctgtgccaggagcagccattgctaagcccatcctgtattgtgcaggtcagctcgtttttaaagagtccggccatcatcttactggtacagacaccatataGGCTACATATGCACAACTCAACTTAtt < 1:1037‑M2/27‑1 (MQ=255) cactgtccgctttgtgccaggagcagccattgctaagtccatcctgtattgtgcaggtcagctcgtttttaaagagtccggccatcatcttactggtacagacaccctcgaGGCTACATATGCACAACTCAACTTATTCATCt > 1:785926‑M2/112‑143 (MQ=255) tccgctttgtgcgaggagcagcctttgctaagtccatcctgtattgtgcaggtcagctcgtttttaaacagtccggccatcatcttactggtacagacaccatataGGCTACCTATGCACAACTCAACTTATTCCTCTAtttt < 2:820661‑M2/37‑1 (MQ=255) ccgctttgtgccaggagcagccattgctaagtccatcctgtattgtgcaggtcagctcgtttttaaagagtccggccatcatcttactggtacagacaccatataGGCTACATATGCACAACTCAACTTATTCATCTAttttt > 1:876874‑M2/106‑143 (MQ=255) ccgctttgtgccaggagcagccattgctaagtccatcctgtattgtgcaggtcagctcgtttttaaagagtccggccatcatcttactggtacagacaccatataGGCTACATATGCACAACTCAACTTATTCATCTAttttt < 1:769833‑M2/38‑1 (MQ=255) ttgtgccaggagcagccattgctaagtccatcctgtattgtgcaggtcagctcgtttttaaagagtccggccatcatcttactggtacagacaccatataGGCTACATATGCACAACTCAACTTATTCATCTATTTTTTGCtt < 1:578310‑M2/43‑1 (MQ=255) gtgccaggagcagccattgctaagtccatcctgtattgtgcgggtcagctcgtttttaaagagtccggccatcatcttactggtacagacaccatataGGCTACATATGCACAACTCAACTTATTCATCTATTTTTTGCTTTa < 2:235029‑M2/45‑1 (MQ=255) gtgccaggagcagccattgctaagtccatcctgtattgtgcaggtcagctcgtttttaaagagtccggccatcatcttactggtacagacaccatataGGCTACATATGCACAACTCAACTTATTCATCTATTTTTTGCTTTa < 1:722037‑M2/45‑1 (MQ=255) ccaggagcagccattgctaagtccatcctgtattgtgcaggtcagctcgtttttaaagagtccggccatcatcttactggtacagacaccatataGGCTACATATGCACCACTCAACTTATTCATCTATTTTTTGCTTTAGCa > 1:931851‑M2/96‑143 (MQ=255) ccaggagcagccattgataagtccatcctgtattgtggaggtcggcgcgttgttaaagagtgcggccatcgtcttactggtacagacaccatataGGCTACATACGCCCAACTGAACTTACTCATCTTTCGTTTGCTTTAGCa > 2:78878‑M2/96‑143 (MQ=255) caggagcagtcattgctatgtccatcctgtattgtgcaggtcagctcgtttttaaagagtccggccatcatcttactggtacagacaccatataGGCTACATATGCACAACTCAACTTATTCATCTATTTTTTGCTTTAGCAt < 2:609617‑M2/49‑1 (MQ=255) caggagcagccattgctaagtccatcctgtattgtgcaggtcagctcgtttttaaagagtccggccatcatcttactggtacagacaccatataGGCTACATATGCACAACTCAACTTATTCATCTATTTTTTGCTTTAGCAt < 1:753818‑M2/49‑1 (MQ=255) ggagcagccattgctaagtccatcctgtattgtgcaggtcagctcgtttttaaagagtccggccatcatcttactggtacagacaccatataGGCTACATATGCACAACTCAACTTATTCATCTATTTTTTGCTTTAGCATGt > 1:44590‑M2/93‑143 (MQ=255) gccattgctaagtccatcctgtattgtgcaggtcagctcggttttaaagcgtccggccatcatcttactggtacagacaccatataGGCTACATATGCACAACTCAACGTAATCATCTATTATTTTCTTTAACATGTCagtga > 2:16967‑M2/87‑142 (MQ=255) ccattgctaagtccatcctgtatggtgcaggtcagctcgtttttaaagagtccggccatcatcttactggtacagacaccatataGGCTACATATGCACAACTCAACTTATTCATCTATTTTTTGCTTTAGCATGTCAGTGtt < 2:614687‑M2/58‑1 (MQ=255) cattgctaagtccatcctgtattgtgcaggtcagctcgtttttaaagagtccggccatcatcttactggtacagacaccatattGGCTACATATGCACAACTCAACTTATTCATCTATTTTTTGCTTTAGCATGTCAGTGTTg < 2:936020‑M2/59‑1 (MQ=255) attgctaagtccatcctgtattgtgcaggtcagctcgcttttaaagagtccggccatcatcttactggtacagacaccatataGGCTACATATGCACAACTCAACTTATTCATCTATTTTTTGCTTTAGCATGTCAGTGTTGc > 2:74645‑M2/84‑143 (MQ=255) ttgctaagtccatcctgtattgtgcaggtcagctcgtttttaaagagtccggccatcatcttactggtacagacaccatataGGCTACATATGCACAACTCAACTTATTCATCTATTTTTTGCTTTAGCATGTCAGTGTTGCt > 1:157257‑M2/83‑143 (MQ=255) tgctaagtccatcctgtattgtgcaggtcagctcgtttttaaagagtccggccatcatcttactggtacagacaccatataGGCTACATATGCACAACTCAACTTATTCATCTATTTTTTGCTTTAGCATGTCAGTGTTGCtt < 2:44590‑M2/62‑1 (MQ=255) gctaagtccatcctgtattgtgcaggtcagctcgtttttaaagagtccggccatcatcttactggtacagacaccatataGGCTACATATGCACAACTCAACTTATTCATCTATTTTTTGCTTTAGCATGTCAGTGTTGCttt < 1:621868‑M2/63‑1 (MQ=255) ctaagtccatcctgtattgtgcaggtcagctcgtttttaaagagtccggccatcatcttactggtacagacaccatataGGCTACATATGCACAACTCAACTTATTCATCTATTTTTTGCTTTAGCATGTCAGTGTTGCTTtc > 1:653284‑M2/80‑143 (MQ=255) tcctgtattgtgcaggtcagctcgtttttaaagagtccggccatcatcttactggtacagacaccatataGGCTACATATGCACAACTCAACTTATTCATCTATTTTTTGCTTTAGCATGTCAGTGTTTCTttctcgtcgcag > 2:216275‑M2/71‑140 (MQ=255) tcctgtattgtgcaggtcagctcgtttttaaagagtccgaccatcatcttactggtacagacaccatataGGCTACATATGCACAACTCAACTTATTCATCTATTTTTTGCTTTCGCATGTCAGTGTTGCTTTCTCGttggct > 2:302714‑M2/71‑142 (MQ=255) cctgtattgtgcaggtcggctcgtttttaaagagtccggccatcatcttactggtacagacaccatataGGCTACATATGCACAACTCAACTTATTCATCTATTTTTTGCTTTAGCATGTCAGTGTTGCTTTCTCGTcggcgg < 1:625358‑M2/74‑1 (MQ=255) tgtattgtgcaggtcagctcgtttttaaagagtccggccatcatcttactggtacagacaccatataGGCTACATATGCACAACTCAACTTATTCATCTATTTTTTGCTTTAGCATGTCAGTGTTGCTTTCTCGTCGGCGGGt > 2:134742‑M2/68‑143 (MQ=255) tattgtgcaggtcagctcgtttttaaagagtccggccatcatcttactggtacagacaccatataGGCTACATATGCACAACTCAACTTATTCCTCTATTTCTTGCTTTAGCATGTCACTGCTGCTTCCTCGCCTGCGGGtgc > 1:287074‑M2/66‑142 (MQ=255) ttgtgcaggtcagctcgtttttaaagagtccggccatcatcttactggtacagacaccatataGGCTACATATGCACAACTCAACTTATTCATCTATTTTTTGCTTTAGCATGTCAGTGTTGCTTTCTCGTCGGCGGGTGAGc < 2:745878‑M2/80‑1 (MQ=255) tgcaggtcagctcgtttttaaagagtccggccatcatcttactggtacagacaccatataGGCTACATATGCACAACTCAACTTATTCATCTATTTTTTGCTTTAGCATGTCAGTGTTGCTTTCTCGTCGGCGGGTGAGCGGt > 1:142146‑M2/61‑143 (MQ=255) gcaggtcagctcgtttttaaagagtccggccatcatcttactggtacagacaccatataTGCTACATATGCACAACTCAACTTATTCATCTATTTTTTGCTTTAGCATGTCAGTGTTGCTTTTTCGTCGGCGGGTGAGCGGtg < 2:174112‑M2/84‑1 (MQ=255) gcaggtcagctcgtttttaaagagtccggccatcatcttactggtacagacaccatataGGCTACATATGCACAACTCAACTTATTCATCTATTTTTTGCTTTAGCATGTCAGTGTTCCTTTCTCGTCGGCGGGTGAGCGCtg > 2:864298‑M2/60‑143 (MQ=255) cggtaagatcctttttaatgacttcggccatcatcttactggtacagacaccatataGGCTACATATGCACAACTCAACTTATTCATCTATTTTTTGCTTTAGCATGTCAGTGTTGCTTTCTCGTCGGCGGGTGAGCGGtgac < 2:3367‑M2/86‑1 (MQ=255) aggtcagctcgtttttaaagagtccggccatcatcttactggtacagacaccatataGGCTACATATGCACAACTCAACTTATTCATCTATTTTTTGCTTTAGCATGTCAGTGTTGCTTTCTCGTCGGCGGGTGAGCGGtgac < 2:876874‑M2/86‑1 (MQ=255) gtttttaaagagtccggccatcatcttactggtacagacaccatataGGCTACATATGCACAACTCAACTTATTCATCTATTTTTTGCTTTAGCATGTCAGTGTTGCTTTCTCGTCGGCGGGTGAGCGGtgacctggcctgcc > 1:916965‑M2/48‑141 (MQ=255) gtttttaaagagtccggccatcatcttactggtacagacaccatataGGCTACATATGCACAACTCAACTTATTCATCTATTTTTTGCTTTAGCATGTCAGTGTTGCTTTCTCGTCGGCGGGTGAGCGGGGACCTGACCTGTc > 1:228598‑M2/48‑143 (MQ=255) ttttaaagaggccggccatcatcttactggtacagacaccatataGGCTACATATGCACAACTCAACTTATTCATCTATTTTTTGCTTTAGCATGTCAGTGTTGCTTTCTCGTCGGCGGGTGAGCGGTGACCTGACCTGTCGa < 1:220519‑M2/98‑1 (MQ=255) tttaaagagtccggccatcatcttactggtacagacaccatataGGCTACATATGCACAACTCAACTTATTCATCTATTTTTTGCTTTAGCATGTCAGTGTTGCTTTCTCGTCGGCGGGTGAGCGGTGACCTGACCTGTCGAt > 2:170692‑M2/45‑143 (MQ=255) agagtccggccatcatcttactggtacagacaccatataGGCTACATATGCACAACTCAACTTATTCATCTATTTTTTGCTTTAGCATGTCAGTGTTGCTTTCTCGTCGGCGGGTGAGCGGTGACCTGACCTGTCGATAAAgg > 1:799553‑M2/40‑143 (MQ=255) agtgcgtccaccagcttactggtacgtaccccatataGGCTACATATGCACACCTCACCTTATGCATCTATTTTTTGCTTTAGCATGTCAGTGTTGCTTTCTCGTCGGCGGGTGAGCGGTGACCTGACCTGTCGATAAAGGaa < 1:741622‑M2/106‑1 (MQ=255) gtccggccatcatctgattggtacagacaccatataGGCTACATATGCACAACTCAACTTATTCATCTATTGTCTGCTTTAGCATGTCAGTGTTGCTTTCTCGTCGGCGGGTGAGCGGTGACCTGACCTGTCGATAAAGGAAc < 2:881344‑M2/107‑1 (MQ=255) ccggccatcatcttactggtacagacaccatataGGCTACATATGCACAACTCAACTTATTCATCTATTTTTTGCTTTAGCATGTCAGTGTTGCTTTCTCGTCGGCGGGTGAGCGGTGACCTGACCTGTCGATAAAGGAACGt < 1:21074‑M2/109‑1 (MQ=255) ggccatcatcttactggtacagacaccatataGGCTACATATGCACAACTCAACTTATTCATCTATTTTTTGCTTTAGCATGTCAGTGTTGCTTTCTCGTCGGCGGGTGAGCGGTGACCTGACCTGTCGATAAAGGAACGTaa < 1:799351‑M2/111‑1 (MQ=255) ggccatcatcttactggtacagacaccatataGGCTACATATGCAAAACTCAACTTATTCATCTATTTTTTACTTAAGCATGTCAGTGTTGCTTTCTATTCAGCGGGTGAGCGGTGACCTGACCTTTCTATATAGGATCGTaa > 2:121630‑M2/33‑143 (MQ=255) ccatcatcttactggtacagacaccatataGGCTACATATGCACAACTCAACTTATTCATCTATTTTTTGCTTTAGCATGTCAGTGTTGCTTTCTCGTCGGCGGGTGAGCGGTGACCTGACCTGTCGATAAAGGAACGTAaca < 2:142146‑M2/113‑1 (MQ=255) catcatcttactggtacagacaccatataGGCTACATATGCACAACTCAACTTATTCATCTATTTTTTGCTTTAGCATGTCAGTGTTGCTTTCTCGTCGGCGCGTGAGCGGTGACATGAGCTCGTGAGCAAGGACCGTAacac > 2:395947‑M2/30‑143 (MQ=255) atcttactggtacagacaccatataGGCTACATATGCACAACTCAACTTATTCATCTATTTTTTGCTTTAGCATGTCAGTGTTGCTTTCTCGTCGGCGGGTGAGCGGTGACCTGACCTGTCGATAAAGGAACGTAACACGttt < 1:310009‑M2/118‑1 (MQ=255) ttactggtacagacaccatataGGCTACATATGCACAACTCAACTTATTCATCTATTTTTTGCTTTAGCATGTCAGTGTTGCTTTCTCGTCGGCGGGTGAGCGGTGACCTGACCTGTCGATAAAGGAACGTAACACGTTTTAt < 2:157257‑M2/121‑1 (MQ=255) tggtacagacaccatataGGCTACATATGCACAACTCAACTTATTCATCTATTTTTTGCTTTAGCATGTCAGTGTTGCTTTCTCGTCGGCGGGTGAGCGGTGACCTGACCTGTCGATCAAGGAACGTAACACGTTTTATGCaa > 2:40741‑M2/19‑143 (MQ=255) gtacagccaccgtataGGCTACATATGCACAACTCCACTTGTTCATCTATTTTTTGCTTTAGCATGTCAGTGTTGCTTTCTCGTCGGCGGGTGAGCGGTGACCTGCCCTGTCGATAAAGGAACGTAACACGTTTTATGCAaca < 2:277501‑M2/127‑1 (MQ=255) gtacagacaccatataGGCTACATATGCACAACTCAACTTATTCATCTATTTTTTGCTTTAGCATGTCAGTGTTGCTTTCTCGTCGGCGGGTGAGCGGTGACCTGACCTGTCGATAAAGGAACGTAACACGTTTTATGCaacc > 2:789492‑M2/17‑142 (MQ=255) atataGGCTACATATGCACAACTCAACTTATTCATCTATTTTTTGCTTTAGCATGTCAGTGTTGCTTTCTCGTCGGCGGGTGAGCGGTGACCTGACCTGTCGATAAAGGAACGTAACACGTTTTATGCAACACCCGCATGCgg > 1:452064‑M2/6‑143 (MQ=255) ataGGCTACATATGCACACCTCAACTTATTCATCTATTTTTTGCTTTAGCATGTCAGTGTTGCTTTCTCGTCGGCGGGTGAGCGGTGACCTGACCTGTCGATAAAGGAACGTAACACGTTTTATGCAACACCCGCATGCGGCa < 1:880147‑M2/140‑1 (MQ=255) | GTCGTAAGAACGGTGATCACTGTCCGCTTTGTGCCAGGAGCAGCCATTGCTAAGTCCATCCTGTATTGTGCAGGTCAGCTCGTTTTTAAAGAGTCCGGCCATCATCTTACTGGTACAGACACCATATACTTTGTGACGGTCAGGCTACATATGCACAACTCAACTTATTCATCTATTTTTTGCTTTAGCATGTCAGTGTTGCTTTCTCGTCGGCGGGTGAGCGGTGACCTGACCTGTCGATAAAGGAACGTAACACGTTTTATGCAACACCCGCATGCGGCA > NC_000913/1645960‑1646241 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |