BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	NC_000913	1,299,499	Δ1,199 bp	intergenic (+254/‑485)	ychE → / → oppA	UPF0056 family inner membrane protein/oligopeptide ABC transporter periplasmic binding protein

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	1299499–1300697	1300697	1–1199	115 [0]	[0] 117	ychE/oppA	UPF0056 family inner membrane protein/oligopeptide ABC transporter periplasmic binding protein

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1299498	0 (0.000)	108 (1.560)	76/274	0.0	100%	intergenic (+253/‑1684)	ychE/oppA	UPF0056 family inner membrane protein/oligopeptide ABC transporter periplasmic binding protein
*	?	NC_000913	1300698 =	0 (0.000)	108 (1.560)	76/274	0.0	100%	intergenic (+1453/‑484)	ychE/oppA	UPF0056 family inner membrane protein/oligopeptide ABC transporter periplasmic binding protein

Only 100 of 115 total aligned reads displayed.

ATTACAGTTAGTTATAAGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTT  >  NC_000913/1299358‑1299640

aTTACAGTTAGTTATAAGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAat                                                                                                                                              <  2:540052‑M1/143‑3 (MQ=255)

    cAGTTAGTTATAAGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataata                                                                                                                                          <  1:746660‑M1/143‑7 (MQ=255)

     agttagttATAAGGATTTCCTTAACTGCTTCTCCTCCCCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataa                                                                                                                                         <  1:145065‑M1/143‑8 (MQ=255)

     agttagttATAAGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCATATCATTATCCTGGGATTGCTGAAGAATAATTGAAATGATATTATTTATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataa                                                                                                                                         <  2:326721‑M1/143‑8 (MQ=255)

     agttagttATAAGGATTTCCTTAACTGCTAGTCCTGACCATCATGTTATTTTTGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataa                                                                                                                                         <  2:315087‑M1/143‑8 (MQ=255)

              taAGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGACGAATAATTGAAATGATATTATTAATTCCACTGCCTTTTGTAGATGAAAGTGCTACatacttatcaattgtt                                                                                                                                >  1:630293‑M1/1‑127 (MQ=255)

              taAGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTATAGGAAAGTGCTAAataataatcaattgtt                                                                                                                                >  2:1039819‑M1/1‑127 (MQ=255)

               aaGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgtta                                                                                                                               <  1:678130‑M1/143‑18 (MQ=255)

                aGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttta                                                                                                                              <  1:479359‑M1/143‑19 (MQ=255)

                 gtctttcctTAACTGCTTCTCCTCACCATCATGTTACTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaa                                                                                                                             <  2:1293388‑M1/140‑20 (MQ=255)

                    attgcttaaCTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaatta                                                                                                                          >  1:944014‑M1/5‑121 (MQ=255)

                     ttCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattat                                                                                                                         >  1:1175093‑M1/1‑120 (MQ=255)

                     ttCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattat                                                                                                                         >  1:905979‑M1/1‑120 (MQ=255)

                      tCCTTAACTGTTGCTCCTCACCATCATGTTATTTTCGCCACATCATACTCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattatt                                                                                                                        <  2:1172997‑M1/143‑25 (MQ=255)

                      tCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattatt                                                                                                                        <  1:359269‑M1/143‑25 (MQ=255)

                      tCCTGAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTTGGCTTGCTGAAGTATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattatt                                                                                                                        <  2:617640‑M1/143‑25 (MQ=255)

                        cTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGACGAATACTTGAAATGATATTATTAATTCCACTCCCTTTGATAGAGAAAAGTGCTAAataataataaattgttaaattattgt                                                                                                                      >  1:1251303‑M1/1‑117 (MQ=255)

                         ttAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtg                                                                                                                     >  1:556868‑M1/1‑116 (MQ=255)

                         ttAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtg                                                                                                                     <  1:396660‑M1/143‑28 (MQ=255)

                         ttAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATACTGGGCTTGCTGAAGAATAATTGAAATGATATTAGTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAagaatcatcaatgtttaaattattgtg                                                                                                                     >  2:1196801‑M1/1‑116 (MQ=255)

                          tAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgc                                                                                                                    <  2:707326‑M1/143‑29 (MQ=255)

                            atggcttCTCCTCCCCATCATGTTATTTCCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTTATTCCACTGGCTTTGGTAGAGGAAAGTGCTAAttaataatcaattgttaaattattgtgcat                                                                                                                  <  1:951549‑M1/140‑31 (MQ=255)

                              tgctgcTCCTCACCATCATGTTATGTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcattt                                                                                                                <  1:213277‑M1/143‑33 (MQ=255)

                              tGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcattt                                                                                                                <  1:835739‑M1/143‑33 (MQ=255)

                              tGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcattt                                                                                                                >  2:451006‑M1/1‑111 (MQ=255)

                                cctctcctCACCTTCATTTTATTTTCGCCACATCATAATCCTTGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttca                                                                                                              <  2:514279‑M1/141‑35 (MQ=255)

                                cTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTACACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttca                                                                                                              >  2:1120615‑M1/1‑109 (MQ=255)

                                 ttCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcac                                                                                                             >  1:1098635‑M1/1‑108 (MQ=255)

                                     cctcTCCGTCATGTTATTTTCGTCACATCATAACCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCAATGACTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactact                                                                                                         <  2:773961‑M1/143‑40 (MQ=255)

                                      ctcACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGGAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactg                                                                                                        >  1:1081066‑M1/1‑103 (MQ=255)

                                       tcACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaatttttgtgcatttcacttctgg                                                                                                       >  1:197854‑M1/1‑102 (MQ=255)

                                       tcACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactgg                                                                                                       <  2:1248851‑M1/143‑42 (MQ=255)

                                       tcACCATCATGTTATTTTAGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTTAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactgg                                                                                                       <  1:3133‑M1/143‑42 (MQ=255)

                                         aCCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaa                                                                                                     <  2:928153‑M1/143‑44 (MQ=255)

                                           cgtcaggtTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaact                                                                                                   <  1:76539‑M1/141‑46 (MQ=255)

                                           catcatGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaact                                                                                                   >  1:579623‑M1/1‑98 (MQ=255)

                                            atcatGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGCATAATTGAAATGCTATTATTAATTCCACTGCCTTTGGTAGAGGACAGTGCTACataataatcaattgttacattattgtgcatttctctcctgggaccg                                                                                                  >  1:331451‑M1/1‑97 (MQ=255)

                                                tGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaat                                                                                              >  1:25606‑M1/1‑93 (MQ=255)

                                                tGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGACTGTGGTAGAGGAAAGTGCTAAataataatcaattgttaaatcattgtgcattacactactggaactgtaat                                                                                              >  2:622976‑M1/1‑93 (MQ=255)

                                                 gTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatc                                                                                             <  2:1178336‑M1/143‑52 (MQ=255)

                                                           ccACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGACAGTGCTAActaataatcaattgttaatttattgtgcatttcactactggaactgtaatcagaaaagata                                                                                   >  1:130853‑M1/1‑82 (MQ=255)

                                                           ccACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagata                                                                                   >  1:818359‑M1/1‑82 (MQ=255)

                                                           ccACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagata                                                                                   >  1:818351‑M1/1‑82 (MQ=255)

                                                              catcatAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagac                                                                                <  2:954028‑M1/143‑65 (MQ=255)

                                                              catcatAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagac                                                                                >  1:1198352‑M1/1‑79 (MQ=255)

                                                               atcatAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCCCTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactagaactgtaatcagaaacgatagaca                                                                               >  2:862258‑M1/1‑78 (MQ=255)

                                                                tcatAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaaacagaaaaaatagacat                                                                              >  2:4212‑M1/1‑77 (MQ=255)

                                                                  atatTCCTTGGCTTGTTGAAGAATAATTGAAATGATATTAGTGATTCCACTGCTTTTTGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcagttcactactggaactgtaatcagaaaagatagacatgc                                                                            <  2:704269‑M1/143‑69 (MQ=255)

                                                                    aaTCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgctt                                                                          >  1:1059802‑M1/1‑73 (MQ=255)

                                                                    aaTCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactctaatcagaaaagatagacatgctt                                                                          >  2:548905‑M1/1‑73 (MQ=255)

                                                                     accctgTGCTTGCTGAATACTAAATGAAATGATATTATCAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAattataatcaattgttaacttattgtgcatttcactactggaactgtaatcagaaaagatagacatgctta                                                                         <  2:237663‑M1/141‑72 (MQ=255)

                                                                     aTCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgctta                                                                         <  2:1010038‑M1/143‑72 (MQ=255)

                                                                      tCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGAGCTAAataataatcaattgttaaattattgtgcatttcacaactggaacagtaatcagtaaagatagacactcttag                                                                        >  2:606277‑M1/1‑71 (MQ=255)

                                                                            gCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatc                                                                  >  2:1212905‑M1/1‑65 (MQ=255)

                                                                             cTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatct                                                                 <  2:1243727‑M1/143‑80 (MQ=255)

                                                                                 cTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaacctctac                                                             >  2:850896‑M1/1‑60 (MQ=255)

                                                                                  tGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatt                                                            >  1:655978‑M1/1‑59 (MQ=255)

                                                                                  tGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatt                                                            <  1:675137‑M1/143‑85 (MQ=255)

                                                                                  tGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagaaatgcttagccaatctctctt                                                            >  2:650148‑M1/1‑59 (MQ=255)

                                                                                    aagaaTAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggcattgtaatcagaaaagatagacatgcttagccaatctctatttg                                                          >  1:287893‑M1/1‑57 (MQ=255)

                                                                                    aagaaTAATTGAAATGATATTATTAATTCCACTGCCTGTGGTAGAGGAAAGTGCTAAataataatcaatagttaaattattgtgcatttcactactggaactgtaatcagaaaagagagacatgcgtagccagtctctatgtg                                                          >  1:254982‑M1/1‑57 (MQ=255)

                                                                                     agaaTAATTGAAATTATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttga                                                         <  2:341649‑M1/143‑88 (MQ=255)

                                                                                     agaaTAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttga                                                         <  2:1041763‑M1/143‑88 (MQ=255)

                                                                                          aatTGAAATGGTATTATTAATTCCCCTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaa                                                    <  1:1252920‑M1/143‑93 (MQ=255)

                                                                                           atTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaat                                                   >  1:850441‑M1/1‑50 (MQ=255)

                                                                                                aaTGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctcaatttgattgaattgaaa                                              >  1:92662‑M1/1‑45 (MQ=255)

                                                                                                    atatTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatg                                          >  1:58866‑M1/1‑41 (MQ=255)

                                                                                                      attattAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtactccgaaaagatagacatgcttagccaatatctctttaattgaattgaaagaggtt                                        >  2:527225‑M1/1‑39 (MQ=255)

                                                                                                       ttattaATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgttt                                       <  1:1087802‑M1/143‑106 (MQ=255)

                                                                                                       ttattaATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgttt                                       <  1:634454‑M1/143‑106 (MQ=255)

                                                                                                       ttattaATCCCACTGCCTGTGGGAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgttt                                       <  1:26063‑M1/143‑106 (MQ=255)

                                                                                                       gtattaaTTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgttt                                       <  2:1292382‑M1/142‑106 (MQ=255)

                                                                                                         attaATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgt                                     <  2:1198352‑M1/143‑108 (MQ=255)

                                                                                                          ttaATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatcgccatgcttagccaatatctctttgattgaattgaaagatgtttgtt                                    <  1:953851‑M1/143‑109 (MQ=255)

                                                                                                          ttaATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgtt                                    >  1:516023‑M1/1‑35 (MQ=255)

                                                                                                            aaTTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaa                                  <  1:323120‑M1/143‑111 (MQ=255)

                                                                                                            aaTGCCACTGCCTTTGGTAGAGGAAAGTGCTAAataagaatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaa                                  <  2:167411‑M1/143‑111 (MQ=255)

                                                                                                             aTTCCACTGCTGTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaag                                 <  2:943976‑M1/143‑112 (MQ=255)

                                                                                                             aTTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgaaagaaatgaaagctgtttgttaag                                 >  2:684178‑M1/1‑32 (MQ=255)

                                                                                                                ccACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattggattgacagatgttcgttacggca                              >  2:1200702‑M1/1‑29 (MQ=255)

                                                                                                                 cACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcat                             <  1:794023‑M1/143‑116 (MQ=255)

                                                                                                                 cACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaagacat                             >  2:1096553‑M1/1‑28 (MQ=255)

                                                                                                                 cACTGCCCTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcat                             <  1:1064002‑M1/143‑116 (MQ=255)

                                                                                                                    tGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatgga                          >  1:173103‑M1/1‑25 (MQ=255)

                                                                                                                    tGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacacgcttagccaaccactatttgattgaattgaaagatgttcgttcaggcatgga                          >  2:1189010‑M1/1‑25 (MQ=255)

                                                                                                                      ccTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatg                        >  1:129631‑M1/1‑23 (MQ=255)

                                                                                                                       cTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgc                       >  1:1156143‑M1/1‑22 (MQ=255)

                                                                                                                             tAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgcaggctc                 >  1:547773‑M1/1‑16 (MQ=255)

                                                                                                                                  gAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgcaagctatagat            >  2:233243‑M1/1‑11 (MQ=255)

                                                                                                                                    aaGTGCTAAataataatcaattgttaaattgttgtggacaacactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgcaagctatagattc          <  2:908310‑M1/143‑135 (MQ=255)

                                                                                                                                    aaGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgcaagctatagattc          <  1:661704‑M1/143‑135 (MQ=255)

                                                                                                                                     aGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgcaagctatagattct         >  2:772298‑M1/1‑8 (MQ=255)

                                                                                                                                      gTGCTAAatcatagtcaattgttaaattattgtgcatttcactactggatctgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgcaagctatagattctg        <  2:268218‑M1/143‑137 (MQ=255)

                                                                                                                                         cTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgcaagctatagattctgata     <  1:1212905‑M1/143‑140 (MQ=255)

                                                                                                                                         cTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgcaagctatagattctgata     >  1:911625‑M1/1‑4 (MQ=255)

                                                                                                                                          tAAataataattaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatccggtttgaaagccagtctctatttgattcaattgaaagatgtttgttaaggcatggatgcaagctatagattctgatac    <  1:947003‑M1/143‑141 (MQ=255)

                                                                                                                                          tAAataataatcaattgttaaatttttgtggttgtaaatactaaaacgggaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgcaagctatagattctgatac    <  1:534879‑M1/143‑141 (MQ=255)

                                                                                                                                          tAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgcaagctatagattctgataa    >  2:754275‑M1/1‑3 (MQ=255)

                                                                                                                                            aataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgcaagctatagattctgatacgg  <  2:1136452‑M1/143‑143 (MQ=255)

                                                                                                                                            aataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgcaaactatagattctgatacgg  <  1:689663‑M1/143‑143 (MQ=255)

ATTACAGTTAGTTATAAGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTT  >  NC_000913/1299358‑1299640

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 13 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`