Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 1,293,032 IS1 (–) +8 bp intergenic (‑110/‑488) hns ← / → tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 257908 =NA (NA)46 (1.150) 39/284 0.1 100% noncoding (768/768 nt) IS1 repeat region
?NC_000913 = 1293039 0 (0.000)intergenic (‑117/‑488) hns/tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase
* ? NC_000913 1293032 =0 (0.000)47 (1.170) 36/284 0.1 100% intergenic (‑110/‑495) hns/tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase
?NC_000913 = 1979270 NA (NA)noncoding (1/768 nt) IS1 repeat region

ATGTTGTTCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTG  >  NC_000913/1292891‑1293174
                                                                                                                                             |                                                                                                                                              
aTGTTGTTCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTAtttt                                                                                                                                               >  1:567185/1‑143 (MQ=255)
 gctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTtg                                                                                                                                              <  2:327806‑M1/3‑1 (MQ=255)
  gttgttCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGTCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTtgt                                                                                                                                             <  2:290082/143‑1 (MQ=255)
  ctgctgtccggcggtgctgttgccgttacgcaccaccccgtcagtagctgaacagcagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaactcagtaagttggcagcatcaccTtgt                                                                                                                                             >  2:15280‑M1/140‑143 (MQ=255)
  ctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTtgt                                                                                                                                             <  1:498100‑M1/4‑1 (MQ=255)
  ctgatggccggcggtgcttttgccgttacgcaccaccccggcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTtgt                                                                                                                                             >  2:564973‑M1/140‑143 (MQ=255)
      ttCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTGGTTGAGGTAATAAGAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTgccg                                                                                                                                         >  1:221779/1‑143 (MQ=255)
       gtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGtgccga                                                                                                                                        <  1:320001‑M1/9‑2 (MQ=255)
       gtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggaaagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTgccgc                                                                                                                                        <  2:564649‑M1/9‑1 (MQ=255)
         aGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCTGggt                                                                                                                                      <  2:729840‑M2/143‑4 (MQ=255)
           ggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccctcatacactaaatcagtaagttggcagcagcaccTTGTGCCGCCaat                                                                                                                                    <  1:248271‑M1/13‑1 (MQ=255)
           ggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcaccccaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCaat                                                                                                                                    <  1:253402‑M1/13‑1 (MQ=255)
            aTTTTAAGTGCTTCGTTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGATGTAATAATAGAGACTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaat                                                                                                                                   >  2:118647‑M2/1‑137 (MQ=255)
              tttAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatga                                                                                                                                 <  2:234580‑M2/143‑9 (MQ=255)
              tgtaaGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCTATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatga                                                                                                                                 >  1:416272‑M2/3‑135 (MQ=255)
               gtgcttttgccgttacgcaccaccccgtcaggagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCaataaat                                                                                                                                >  1:27204‑M1/127‑143 (MQ=255)
               gtgcttttgccgttacccaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCaataaat                                                                                                                                >  2:410722‑M1/127‑143 (MQ=255)
                   ttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccaatggagcacctcaaaaacaccatcatacactaaatcagtaaggtgccagcatcaccATGTGCGGCCAATAAATATCt                                                                                                                            <  2:695509‑M1/21‑1 (MQ=255)
                     ttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagtcggcagcatcaccTTGTGCCGCCAATCACTATCttt                                                                                                                          <  2:492324‑M1/23‑1 (MQ=255)
                       ttCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaactt                                                                                                                        <  1:89459‑M2/143‑18 (MQ=255)
                        tCGCTCATTGTAGTAATCTCAAAGTTATATTGGGGTGGTGTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaactta                                                                                                                       >  2:482235‑M2/1‑125 (MQ=255)
                          gttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATa                                                                                                                     <  1:157095‑M1/28‑1 (MQ=255)
                           ttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATaa                                                                                                                    <  1:338521‑M1/29‑1 (MQ=255)
                           cTCATTGTAGTAATCTCAAACTTATATTGGGGTGTTTTGTTGAGGTAATAATATATCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattg                                                                                                                    >  1:635855‑M2/1‑122 (MQ=255)
                               ttGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatag                                                                                                                <  1:122184‑M2/143‑26 (MQ=255)
                                  tagtaATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgt                                                                                                             <  1:569664‑M2/143‑29 (MQ=255)
                                   agtaATCTCAAACTTATATTGGGGTTGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgtt                                                                                                            >  1:396969‑M2/1‑114 (MQ=255)
                                   agtaATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactcccacttattgatagtgtt                                                                                                            <  2:527079‑M2/143‑30 (MQ=255)
                                       aTCTCAAACTTATATTGGGGTGGTTTGTTGCGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttat                                                                                                        >  1:52048‑M2/1‑110 (MQ=255)
                                        cgtcagtagctgaacaggaggaacagctgatagaaacagaagccactggagcacctcaaaaacaccataatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATAACTTTTCATAAaattagcacgaaa                                                                                                       <  2:200224‑M1/42‑7 (MQ=255)
                                           cAAACGTATATTGGGGTGGTTTGGTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttc                                                                                                    >  1:662277‑M2/1‑106 (MQ=255)
                                             aaCTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcag                                                                                                  >  1:501691‑M2/1‑104 (MQ=255)
                                             aaCTTATATTGGGGTGGTGTGTTGCGCTAATACTAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGGGCCGggtaatgactccaacttattgatagtgttttatgttcag                                                                                                  >  1:143982‑M2/1‑104 (MQ=255)
                                              aCTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcaga                                                                                                 >  1:172084‑M2/1‑103 (MQ=255)
                                                  tgaacaggagggacagctgatagaaacagaagccactggagcacctcagaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCa                                                                                             <  2:417273‑M1/52‑1 (MQ=255)
                                                  tgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCa                                                                                             <  1:278245‑M1/52‑1 (MQ=255)
                                                   gaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATACCTTTTCATACAATTAGCCAGAAAAGACGCGGCat                                                                                            <  2:297709‑M1/53‑1 (MQ=255)
                                                      cagtagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCAtata                                                                                         >  1:552106‑M1/88‑143 (MQ=255)
                                                          gtggtTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagattatgcccgatg                                                                                     <  2:641507‑M2/143‑53 (MQ=255)
                                                            ggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTa                                                                                   <  1:227336‑M1/62‑1 (MQ=255)
                                                             gtTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGACGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgact                                                                                  <  2:523600‑M2/143‑56 (MQ=255)
                                                              tttGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactt                                                                                 <  1:516838‑M2/143‑57 (MQ=255)
                                                               ttgttgAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgacttt                                                                                >  2:165854‑M2/1‑86 (MQ=255)
                                                                agctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactagatcagtaagctggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGCAAAGACGCGGCATATAGCCGTATTTa                                                                               <  2:89238‑M1/66‑1 (MQ=255)
                                                                  ttgAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtc                                                                             <  1:62640‑M2/143‑61 (MQ=255)
                                                                  ttgAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtc                                                                             >  2:89459‑M2/1‑83 (MQ=255)
                                                                  ttgAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgacttggtc                                                                             <  2:242549‑M2/143‑61 (MQ=255)
                                                                        taataaTAGAGCCTTCAATTCAGTTGTGCAATAGCCAGGACTGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcac                                                                       <  1:145588‑M2/143‑67 (MQ=255)
                                                                        taataaTAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCAGggaaaaaactccaacttattggtaggtctttatgttgagataatgcccgatgactttgttctgcag                                                                       <  2:546067‑M2/143‑67 (MQ=255)
                                                                         aataatAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagc                                                                      <  2:565152‑M2/143‑68 (MQ=255)
                                                                          aacagaagccactggagcacctcaaaaacaccatcatacactaaatgagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATCTAGCCCTATTTACACCgctgat                                                                     <  1:573320‑M1/76‑1 (MQ=255)
                                                                            cagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGAttt                                                                   <  2:348034‑M1/78‑1 (MQ=255)
                                                                              gaagccactggagtacctcaaaaacaccatcatacactaaatccgtaagtgggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCg                                                                 >  2:474107‑M1/64‑143 (MQ=255)
                                                                              gaagccactggagcacctcaaaaacaccatcataccctaaatcagtaagttggcagcatcactTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCg                                                                 >  1:367896‑M1/64‑143 (MQ=255)
                                                                                gagCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgctgactttgtcatgcagctccaccg                                                               <  1:532951‑M2/143‑75 (MQ=255)
                                                                                gagCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccg                                                               <  1:312313‑M2/143‑75 (MQ=255)
                                                                                 gccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCgcag                                                              <  2:484301‑M1/83‑1 (MQ=255)
                                                                                    cTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtggtttatggtcagatagtgcccgatgactctggcatgcggcgccgccgattt                                                           <  2:3079‑M2/143‑79 (MQ=255)
                                                                                     ttAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatggctccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgatttt                                                          <  2:563811‑M2/143‑80 (MQ=255)
                                                                                     ttAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgatttt                                                          >  1:646193‑M2/1‑64 (MQ=255)
                                                                                       ggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTg                                                        >  1:327806‑M1/55‑143 (MQ=255)
                                                                                           cacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCTCCAATAAATATCTTTTCATAAAATTAGCCAGAAAACACGCGGCATATAGCCCTATTTACACCGATGCTTTCGCAGCacgtggcgc                                                    <  1:662421‑M1/93‑5 (MQ=255)
                                                                                            acctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGtt                                                   <  1:354316‑M1/94‑1 (MQ=255)
                                                                                              ctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTaa                                                 <  1:319931‑M1/96‑1 (MQ=255)
                                                                                              ctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTaa                                                 <  1:112871‑M1/96‑1 (MQ=255)
                                                                                               tcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTaaa                                                <  1:543160‑M1/97‑1 (MQ=255)
                                                                                               tcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTaaa                                                <  1:370118‑M1/97‑1 (MQ=255)
                                                                                               tcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACCCGGCATATAGCCCTATTTACAACGATGATTTCGCCGCACGTGAGGAtaac                                                <  2:278789‑M1/97‑2 (MQ=255)
                                                                                                 aaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAAc                                              <  1:174356‑M1/99‑1 (MQ=255)
                                                                                                 aaaaacaccatcatacactaaatcagtaagatggcagcatcaccTTGTGCCGCCAATAAATATATTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGgttaacac                                              <  1:8691‑M1/99‑4 (MQ=255)
                                                                                                    cAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgac                                           <  1:198863‑M2/143‑95 (MQ=255)
                                                                                                          ccAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgt                                     >  1:359646‑M2/1‑43 (MQ=255)
                                                                                                             atacactaaatcagtaagttggcagcatcaccTTGTGCCACCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCAt                                  <  2:452846‑M1/111‑1 (MQ=255)
                                                                                                                cactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTc                               <  1:328005‑M1/114‑1 (MQ=255)
                                                                                                                   tAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgatattgagaacggcagcgacttccgtcccagccgt                            <  1:300992‑M2/143‑110 (MQ=255)
                                                                                                                   tAAGGAATTCAAAATTATTCTTTATTTTGTGCCGggaaatgactccaacttattgatagtgtttgatggtcagataatgcccgatgactttgtcatgcagctccaccgattttgacaacgacggagacacccgtccaagccgg                            <  2:527370‑M2/143‑110 (MQ=255)
                                                                                                                       tcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACAtttt                        >  2:157095‑M1/23‑143 (MQ=255)
                                                                                                                           taagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATgg                    >  1:725020‑M1/19‑143 (MQ=255)
                                                                                                                              gtttgcagcatctccTTGGGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGATGTTAAAACTTCCTGATTCATGTCACATTTTATGGGga                 >  2:221466‑M1/16‑143 (MQ=255)
                                                                                                                              gttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATTTCACATATTATGGGga                 <  2:569599‑M1/128‑1 (MQ=255)
                                                                                                                              aaaTTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagatactgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgccccagccgcgccacgtgcag                 <  2:137660‑M2/143‑121 (MQ=255)
                                                                                                                               aaTTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgc                >  2:62640‑M2/1‑22 (MQ=255)
                                                                                                                                tggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTCTGGggagg               <  1:437221‑M1/130‑2 (MQ=255)
                                                                                                                                  tGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctc             >  1:704579‑M2/1‑19 (MQ=255)
                                                                                                                                   gTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcc            <  1:541384‑M2/143‑126 (MQ=255)
                                                                                                                                     gcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAACTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATc          >  2:174356‑M1/9‑143 (MQ=255)
                                                                                                                                     gaatcaccGTGTGCCGCCAAGAAATAGCGTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATc          >  1:94979‑M1/9‑143 (MQ=255)
                                                                                                                                      catcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCg         <  1:343901‑M1/136‑1 (MQ=255)
                                                                                                                                       tttATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagatt        >  1:29384‑M2/1‑14 (MQ=255)
                                                                                                                                       tttATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagatt        <  1:127615‑M2/143‑130 (MQ=255)
                                                                                                                                       tttATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgcggcctcagatt        <  2:165964‑M2/143‑130 (MQ=255)
                                                                                                                                         tATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattca      >  1:234580‑M2/1‑12 (MQ=255)
                                                                                                                                         tATTTTGGGCCGcgtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattca      >  2:507173‑M2/1‑12 (MQ=255)
                                                                                                                                          accTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAgg     <  1:494426‑M1/140‑1 (MQ=255)
                                                                                                                                           ttttGTGCCAggtaatgattccatcttattgatagtgttttatgttcagataatgctcgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcagg    >  2:641517‑M2/1‑10 (MQ=255)
                                                                                                                                             ttGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTg  <  1:34213/143‑1 (MQ=255)
                                                                                                                                             |                                                                                                                                              
ATGTTGTTCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTG  >  NC_000913/1292891‑1293174

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.