New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2926901	58 (0.890)	3 (0.050)	3/270	9.8	5.2%	coding (594/1365 nt)	ygdH	UPF0717 family protein
	?	NC_000913	= 2926911	55 (0.890)					coding (604/1365 nt)	ygdH	UPF0717 family protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GTCTGCTGGGGCGGTCACTCAATTAACGAAAACGAGTATTTGTATGCCCGTCGCGTCGGAAACCAGCTGGGCCTGCGTGAGCTGAATATCTGCACCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGAAGCG  >  NC_000913/2926761‑2927039                                                                                                                                             |                                                                                                                                           gtCTGCTGGGGCGGTCACTCAATTAACGAAAACGAGTATTTGTATGCCCGTCGCGTCGGAAACCAGCTGGGCCTGCGTGAGCTGAATATCTGCACCGGCTGTGGTCCGGGAGAGATGCAAGCGCCGATGAAAGGTGCTGCGGt                                                                                                                                          >  1:726367/1‑143 (MQ=255)   ctgcggGGGCGGTCGCTCAATTAGCGGAAACGAGTATTTGTATGCCCGTCGCGTCGGAAACCAGCTGGGCCTGCGTGAGCTGAATATCTGCACCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCg                                                                                                                                        <  1:66240/143‑1 (MQ=255)   ctgcggGGGCGGTCACTCAATTAACGAAAACGAGTATTTGTATGCCCGTCGCGTCGGAAACCAGCTGGGCCTGCGTGAGCTGAATATCTGCACCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCg                                                                                                                                        <  1:1017564/143‑1 (MQ=255)     gctgGGGCGGTCACTCAATTAACGAAAACGAGTATTTGTATGCCCGTCGCGTCGGAAACCAGCTGGGCCTGCGTGAGCTGAATATCTGCACCGGCTGTGGTCCGGGAGCGATGGGAGCGCCGCTGAAAGGTGCTGGGGTCGGa                                                                                                                                      >  2:589253/1‑143 (MQ=255)        ggggCGGTCACTCAATTAACGAAAACGAGTATTTGTATGCCCGTCGCGTCGGAAACCAGCTGGGCCTGCGTGAGCTGAATATCTGCACCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGacac                                                                                                                                   >  2:622552/1‑143 (MQ=255)          ggCGGGCACTCAATTAACGAAAACGAGTATTTGTATGCCCGTCGCGTCGGAAACCAGCTGGGCCTGCGTGAGCTGAATATCTGCACCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACAcgc                                                                                                                                 <  1:692259/143‑1 (MQ=255)                cacgcgcttAACGAAAACGAGGATTGGTATGCCCGTCGCGTCGGAAACCAGCTGGGCCTGCGTGAGCTGAATATCTGCACCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCgcagca                                                                                                                           <  2:891706/136‑1 (MQ=255)                 aCTCAATTAACGAAAACGAGTATTTGTATGCCCGTCGCGTCGGAAACCAGCTGGGCCTGCGTGAGCTGAATATCTGCACCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGcagcag                                                                                                                          >  1:147517/1‑143 (MQ=255)                 aCTCAATTAACGAAAACGAGTATTTGTATGCCCGTCGCGTCGGAAACCAGCTGGGCCTGCGTGAGCTGAATATCTGCACCGGCTGTGGGCGTTCTGCGCTGCAGGCGCCGATGAAACGTGCTGCGCTCGGAAACGCGgagcag                                                                                                                          >  1:973991/1‑143 (MQ=255)                 aCTCAATTAACGAAAACGAGTATTTGTATGCCCGTCGCGTCGGAAACCAGCTAGGCCTGCGTGAGCTGAATATCTGCACCCGCTGTGGTCCGGGAGCGATGGCAGCGCCGATGACAGATGCTGCGGGCGGACACGCgcagcgc                                                                                                                          >  2:480711/1‑141 (MQ=255)                     aaTTAACGAAAACGAGTATTTGTATGCCCGTCGCGTCGGAAACCAGCTGGGCCTGCGTGAGCTGAATATCTGCACCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGtt                                                                                                                      >  1:918419/1‑143 (MQ=255)                       ttAACGAAAACGAGTATTTGTATGCCCGTCGCGTCGGAAACCAGCTGGGCCTGCGTGAGCTGAATATCTGCACCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGACAGGTGCTGCGGTCGGCCACGCGCCGCGGCGTTAc                                                                                                                    >  2:321423/1‑143 (MQ=255)                          aCGAAAACGAGTATTTGTATGCCCGTCGCGTCGGAAGCCAGCTGGGCCTGCGTGAGCTGAATATCTGCACCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACaaa                                                                                                                 <  1:852271/143‑1 (MQ=255)                              aaccatgTATTTGTATGCCCGTCGCGTCGGAAACCGCCTGGGCCTGCGTGAGCTGAATATCTGCACCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACa                                                                                                             <  1:268594/137‑1 (MQ=255)                                 cGAGTATTTGTATGCCCGTCGCGTCGGAAACCAGCTGGGCCTGCGTGAGCTGAATATCTGCACCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTc                                                                                                          <  2:973216/143‑1 (MQ=255)                                 cGAGTATTTGTATGCCCGTCGCGTCGGAAACCAGCTGGGCCTGCGTGAGCTGAATATCTGCACCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTc                                                                                                          <  2:970436/143‑1 (MQ=255)                                     tATTTGTATGCCCGTCGCGTCGGAAACCAGCTGGGCCTGCGTGAGCTGAATATCTCCCCCGGCTGTGGGCCGGGAGCGATGGCAGCGCCGATGAAAGGGGGTGCGGTCGGACACGCGCGGCAGTGTTACAAAGACGGTCgctc                                                                                                      >  1:714319/1‑140 (MQ=255)                                     tATTTGTATGCCCGTCGCGTCGGAAACCAGCTCGGCCTGCGTGAGCTGAATATCTGCACCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCCGCGTTACAAAGACAGTCgctg                                                                                                      >  2:608620/1‑140 (MQ=255)                                       tttGTATGCCCGTCGCGGCGGAAACCAGCTGGGCCTGCGTGAGCTGAATATCTGCACCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTa                                                                                                    <  1:284746/143‑1 (MQ=255)                                         tggcgcgccGTCGCGTCGGGAACCCGCTGGGCCTGGGTGAGCTGAATATCGGCACCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCTGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTAtt                                                                                                  <  2:690323/136‑1 (MQ=255)                                            aTGCCCGTCGCGTCGGAAACCAGCTGGGCCTGCGTGAGCGGAATATCTGCACCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGt                                                                                               <  1:1046611/143‑1 (MQ=255)                                             tGCCCGTCGCGTCGGAACCCAGCTGGGCCTGCGTGAGCTGAATATCTGCACCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTa                                                                                              <  1:305976/143‑1 (MQ=255)                                              gCCCGTCGCGTCGGAAACCAGCTGGGCCTGCGTGAGCTGAATATCTGCACCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTAt                                                                                             <  2:1116763/143‑1 (MQ=255)                                                ccGTCGCGTCGGAAACCAGCTGGGCCTGCGTGAGCTGAATATCTGCACCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGCTTTATTGGTATGa                                                                                           >  2:787476/1‑143 (MQ=255)                                                      cgtcgGAAACCAGCTGGGCCTGCGTGAGCTGAATATCTGCACCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGc                                                                                     >  2:248432/1‑143 (MQ=255)                                                       gtcgGAAACCAGCTGGGCCTGCGTGAGCTGAATATCTGCACCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGcc                                                                                    <  1:546923/143‑1 (MQ=255)                                                       gtcgGAAACCAGCTGGGCCTGCGTGAGCTCAATTGCTGCACCGGCTGTGGTCCGGGAGCGATTGAAGCGCCGATGAATGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGcc                                                                                    <  2:635365/143‑1 (MQ=255)                                                               ccAGCCGGGCCTGCGTGAGGGGAATATCTGCACCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGACAGTCACGCGGAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCGATTa                                                                            <  1:491038/143‑1 (MQ=255)                                                                cAGCTGGGCCTGCGTGAGCTGAATATCTGCACCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCGATTAt                                                                           <  1:580361/143‑1 (MQ=255)                                                                    tGGGCCGGCGTGAGCTGAATATCTGCACCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCGATTATcgcc                                                                       <  1:622552/143‑1 (MQ=255)                                                                      ggCCGGCGTGAGCTGAATATGTGCACCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATAAAAGGTGCTGCGGTTGGACACGCGCAGCAGCGTTACAAAGACAGTCGTGTTATTGGTATGACAGAGCCGTCGATTATcgccgc                                                                     <  1:818457/143‑1 (MQ=255)                                                                        ccTGCGTGAGCTGAATATCTGCACCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCGATTATCGCCGCTg                                                                   >  2:331877/1‑143 (MQ=255)                                                                        ccTGCGTGAGCTGAATATCTGCACCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGAACTGCGATCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCGATTATCGCCGCTg                                                                   >  1:909951/1‑143 (MQ=255)                                                                           gCGTGAGCTGAATACCTGCCCCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCGATTATCGCCGCTGAAc                                                                <  1:273247/143‑1 (MQ=255)                                                                                aGCTGAATATCTGCACCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGCTCTGACACGCGCAGCAGCGTTACCAAGACAGCCGTTCTCTCGGTACGACAGATCCGTCGCTGACCGCCGCTTACCCGCCt                                                           >  1:996102/1‑143 (MQ=255)                                                                                         tCTGCACCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTg                                                  <  1:248432/143‑1 (MQ=255)                                                                                          cggCACCGGCTTTTGTCCGGGAGCGATGGAAGCGCTGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTgg                                                 <  1:21628/141‑1 (MQ=255)                                                                                           tgcgctggCTGTGGTCCGGGTGCGAGAGAAGCGCCGATGAAAGGTTCTGCGGTCGGACACGCGCAGGAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGt                                                <  2:998341/137‑1 (MQ=255)                                                                                           tGCACCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGt                                                <  2:19612/143‑1 (MQ=255)                                                                                           tGCACCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGt                                                >  1:567189/1‑143 (MQ=255)                                                                                                cGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTTGTATGACAGAGCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACg                                           <  1:608620/143‑1 (MQ=255)                                                                                                         tCCGGGAGCGATGGCAGCGCCGATGAAAGGCGCTGCGGTCGGACACGCGCGGGAGCGTTACAAAGACAGTCGTCTTATTGGTACGACAGAGCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGatca                                  <  2:944098/143‑1 (MQ=255)                                                                                                         tCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGGCGTTTTATTGGTATGACAGAGCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGatca                                  <  2:527463/143‑1 (MQ=255)                                                                                                           cGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGatcatc                                >  1:905714/1‑143 (MQ=255)                                                                                                               aggggtGGAAGCGCCGATGCAAGGTGCTGCGGTCGGACACGCGCAGCGGCGTTACAAAGACAGTCGGTTTATTGGTAGGACAGAGCCGTCGATGATCGCCGCTGCACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGc                            <  2:1049783/138‑1 (MQ=255)                                                                                                                gCGATGGAAGCGCCGATGGAGGGTGCTGCTGTCGGACACTCTCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGcc                           <  2:808212/143‑1 (MQ=255)                                                                                                                  gATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGATTAAATGGTATGACAGAGCCGTCGATTATCGCCGCTGAACAGCCTAACCCGCTGGTCAACGAATTCATCAGCATGCCAg                         >  2:453456/1‑143 (MQ=255)                                                                                                                   aTGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCGATTCTCTCCGCTGCACCGCCTAACCCGCTGGTCAATGACTTGCTCCACCTGCCata                        >  1:763761/1‑141 (MQ=255)                                                                                                                   aTGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCCGCGTGCCAGa                        >  1:127752/1‑143 (MQ=255)                                                                                                                         gcgcCTATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGa                  <  2:474892/143‑1 (MQ=255)                                                                                                                           gcCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGaaa                <  2:147517/143‑1 (MQ=255)                                                                                                                             cGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATCTCGaaaca              >  1:713246/1‑141 (MQ=255)                                                                                                                             cGAGGAAGGGTGCTGCGGTCGGCCACGCGCAGCAGCGTCACAAAGACCGTCGTTTTATTGGTATGACAGAGCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGaaaaa              <  1:699713/143‑1 (MQ=255)                                                                                                                              gATGAAAGGTGCTGCGGTCGGACACGCGCAGCTCAAATACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAAc             <  2:1126089/143‑1 (MQ=255)                                                                                                                                 ggacggggctgcGGCTGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCGATGATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTc          <  2:912248/136‑1 (MQ=255)                                                                                                                                 gAAAGGTGCTGCGGTCGGACACGGGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTc          <  1:969457/143‑1 (MQ=255)                                                                                                                                      gTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGaa     <  1:818252/143‑1 (MQ=255)                                                                                                                                         ctgcGGTCGGACACGCGCAGCAGGGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAACACCTCTGGAAGCg  >  2:1152382/1‑143 (MQ=255)                                                                                                                                             |                                                                                                                                           GTCTGCTGGGGCGGTCACTCAATTAACGAAAACGAGTATTTGTATGCCCGTCGCGTCGGAAACCAGCTGGGCCTGCGTGAGCTGAATATCTGCACCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGAAGCG  >  NC_000913/2926761‑2927039

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.