New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2926901	58 (0.890)	3 (0.050)	3/270	9.8	5.2%	coding (594/1365 nt)	ygdH	UPF0717 family protein
	?	NC_000913	= 2926911	55 (0.890)					coding (604/1365 nt)	ygdH	UPF0717 family protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GGCGGTCACTCAATTAACGAAAACGAGTATTTGTATGCCCGTCGCGTCGGAAACCAGCTGGGCCTGCGTGAGCTGAATATCTGCACCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGAAGCGTTTGTCCGTATCGC  >  NC_000913/2926770‑2927053                                                                                                                                              |                                                                                                                                               ggCGGGCACTCAATTAACGAAAACGAGTATTTGTATGCCCGTCGCGTCGGAAACCAGCTGGGCCTGCGTGAGCTGAATATCTGCACCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACAcgc                                                                                                                                               <  1:692259/143‑1 (MQ=255)       cacgcgcttAACGAAAACGAGGATTGGTATGCCCGTCGCGTCGGAAACCAGCTGGGCCTGCGTGAGCTGAATATCTGCACCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCgcagca                                                                                                                                         <  2:891706/136‑1 (MQ=255)        aCTCAATTAACGAAAACGAGTATTTGTATGCCCGTCGCGTCGGAAACCAGCTGGGCCTGCGTGAGCTGAATATCTGCACCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGcagcag                                                                                                                                        >  1:147517/1‑143 (MQ=255)        aCTCAATTAACGAAAACGAGTATTTGTATGCCCGTCGCGTCGGAAACCAGCTGGGCCTGCGTGAGCTGAATATCTGCACCGGCTGTGGGCGTTCTGCGCTGCAGGCGCCGATGAAACGTGCTGCGCTCGGAAACGCGgagcag                                                                                                                                        >  1:973991/1‑143 (MQ=255)        aCTCAATTAACGAAAACGAGTATTTGTATGCCCGTCGCGTCGGAAACCAGCTAGGCCTGCGTGAGCTGAATATCTGCACCCGCTGTGGTCCGGGAGCGATGGCAGCGCCGATGACAGATGCTGCGGGCGGACACGCgcagcgc                                                                                                                                        >  2:480711/1‑141 (MQ=255)            aaTTAACGAAAACGAGTATTTGTATGCCCGTCGCGTCGGAAACCAGCTGGGCCTGCGTGAGCTGAATATCTGCACCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGtt                                                                                                                                    >  1:918419/1‑143 (MQ=255)              ttAACGAAAACGAGTATTTGTATGCCCGTCGCGTCGGAAACCAGCTGGGCCTGCGTGAGCTGAATATCTGCACCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGACAGGTGCTGCGGTCGGCCACGCGCCGCGGCGTTAc                                                                                                                                  >  2:321423/1‑143 (MQ=255)                 aCGAAAACGAGTATTTGTATGCCCGTCGCGTCGGAAGCCAGCTGGGCCTGCGTGAGCTGAATATCTGCACCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACaaa                                                                                                                               <  1:852271/143‑1 (MQ=255)                     aaccatgTATTTGTATGCCCGTCGCGTCGGAAACCGCCTGGGCCTGCGTGAGCTGAATATCTGCACCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACa                                                                                                                           <  1:268594/137‑1 (MQ=255)                        cGAGTATTTGTATGCCCGTCGCGTCGGAAACCAGCTGGGCCTGCGTGAGCTGAATATCTGCACCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTc                                                                                                                        <  2:973216/143‑1 (MQ=255)                        cGAGTATTTGTATGCCCGTCGCGTCGGAAACCAGCTGGGCCTGCGTGAGCTGAATATCTGCACCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTc                                                                                                                        <  2:970436/143‑1 (MQ=255)                            tATTTGTATGCCCGTCGCGTCGGAAACCAGCTGGGCCTGCGTGAGCTGAATATCTCCCCCGGCTGTGGGCCGGGAGCGATGGCAGCGCCGATGAAAGGGGGTGCGGTCGGACACGCGCGGCAGTGTTACAAAGACGGTCgctc                                                                                                                    >  1:714319/1‑140 (MQ=255)                            tATTTGTATGCCCGTCGCGTCGGAAACCAGCTCGGCCTGCGTGAGCTGAATATCTGCACCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCCGCGTTACAAAGACAGTCgctg                                                                                                                    >  2:608620/1‑140 (MQ=255)                              tttGTATGCCCGTCGCGGCGGAAACCAGCTGGGCCTGCGTGAGCTGAATATCTGCACCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTa                                                                                                                  <  1:284746/143‑1 (MQ=255)                                tggcgcgccGTCGCGTCGGGAACCCGCTGGGCCTGGGTGAGCTGAATATCGGCACCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCTGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTAtt                                                                                                                <  2:690323/136‑1 (MQ=255)                                   aTGCCCGTCGCGTCGGAAACCAGCTGGGCCTGCGTGAGCGGAATATCTGCACCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGt                                                                                                             <  1:1046611/143‑1 (MQ=255)                                    tGCCCGTCGCGTCGGAACCCAGCTGGGCCTGCGTGAGCTGAATATCTGCACCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTa                                                                                                            <  1:305976/143‑1 (MQ=255)                                     gCCCGTCGCGTCGGAAACCAGCTGGGCCTGCGTGAGCTGAATATCTGCACCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTAt                                                                                                           <  2:1116763/143‑1 (MQ=255)                                       ccGTCGCGTCGGAAACCAGCTGGGCCTGCGTGAGCTGAATATCTGCACCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGCTTTATTGGTATGa                                                                                                         >  2:787476/1‑143 (MQ=255)                                             cgtcgGAAACCAGCTGGGCCTGCGTGAGCTGAATATCTGCACCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGc                                                                                                   >  2:248432/1‑143 (MQ=255)                                              gtcgGAAACCAGCTGGGCCTGCGTGAGCTGAATATCTGCACCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGcc                                                                                                  <  1:546923/143‑1 (MQ=255)                                              gtcgGAAACCAGCTGGGCCTGCGTGAGCTCAATTGCTGCACCGGCTGTGGTCCGGGAGCGATTGAAGCGCCGATGAATGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGcc                                                                                                  <  2:635365/143‑1 (MQ=255)                                                      ccAGCCGGGCCTGCGTGAGGGGAATATCTGCACCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGACAGTCACGCGGAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCGATTa                                                                                          <  1:491038/143‑1 (MQ=255)                                                       cAGCTGGGCCTGCGTGAGCTGAATATCTGCACCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCGATTAt                                                                                         <  1:580361/143‑1 (MQ=255)                                                           tGGGCCGGCGTGAGCTGAATATCTGCACCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCGATTATcgcc                                                                                     <  1:622552/143‑1 (MQ=255)                                                             ggCCGGCGTGAGCTGAATATGTGCACCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATAAAAGGTGCTGCGGTTGGACACGCGCAGCAGCGTTACAAAGACAGTCGTGTTATTGGTATGACAGAGCCGTCGATTATcgccgc                                                                                   <  1:818457/143‑1 (MQ=255)                                                               ccTGCGTGAGCTGAATATCTGCACCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCGATTATCGCCGCTg                                                                                 >  2:331877/1‑143 (MQ=255)                                                               ccTGCGTGAGCTGAATATCTGCACCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGAACTGCGATCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCGATTATCGCCGCTg                                                                                 >  1:909951/1‑143 (MQ=255)                                                                  gCGTGAGCTGAATACCTGCCCCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCGATTATCGCCGCTGAAc                                                                              <  1:273247/143‑1 (MQ=255)                                                                       aGCTGAATATCTGCACCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGCTCTGACACGCGCAGCAGCGTTACCAAGACAGCCGTTCTCTCGGTACGACAGATCCGTCGCTGACCGCCGCTTACCCGCCt                                                                         >  1:996102/1‑143 (MQ=255)                                                                                tCTGCACCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTg                                                                <  1:248432/143‑1 (MQ=255)                                                                                 cggCACCGGCTTTTGTCCGGGAGCGATGGAAGCGCTGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTgg                                                               <  1:21628/141‑1 (MQ=255)                                                                                  tgcgctggCTGTGGTCCGGGTGCGAGAGAAGCGCCGATGAAAGGTTCTGCGGTCGGACACGCGCAGGAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGt                                                              <  2:998341/137‑1 (MQ=255)                                                                                  tGCACCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGt                                                              >  1:567189/1‑143 (MQ=255)                                                                                  tGCACCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGt                                                              <  2:19612/143‑1 (MQ=255)                                                                                       cGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTTGTATGACAGAGCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACg                                                         <  1:608620/143‑1 (MQ=255)                                                                                                tCCGGGAGCGATGGCAGCGCCGATGAAAGGCGCTGCGGTCGGACACGCGCGGGAGCGTTACAAAGACAGTCGTCTTATTGGTACGACAGAGCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGatca                                                <  2:944098/143‑1 (MQ=255)                                                                                                tCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGGCGTTTTATTGGTATGACAGAGCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGatca                                                <  2:527463/143‑1 (MQ=255)                                                                                                  cGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGatcatc                                              >  1:905714/1‑143 (MQ=255)                                                                                                      aggggtGGAAGCGCCGATGCAAGGTGCTGCGGTCGGACACGCGCAGCGGCGTTACAAAGACAGTCGGTTTATTGGTAGGACAGAGCCGTCGATGATCGCCGCTGCACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGc                                          <  2:1049783/138‑1 (MQ=255)                                                                                                       gCGATGGAAGCGCCGATGGAGGGTGCTGCTGTCGGACACTCTCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGcc                                         <  2:808212/143‑1 (MQ=255)                                                                                                         gATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGATTAAATGGTATGACAGAGCCGTCGATTATCGCCGCTGAACAGCCTAACCCGCTGGTCAACGAATTCATCAGCATGCCAg                                       >  2:453456/1‑143 (MQ=255)                                                                                                          aTGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCGATTCTCTCCGCTGCACCGCCTAACCCGCTGGTCAATGACTTGCTCCACCTGCCata                                      >  1:763761/1‑141 (MQ=255)                                                                                                          aTGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCCGCGTGCCAGa                                      >  1:127752/1‑143 (MQ=255)                                                                                                                gcgcCTATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGa                                <  2:474892/143‑1 (MQ=255)                                                                                                                  gcCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGaaa                              <  2:147517/143‑1 (MQ=255)                                                                                                                    cGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATCTCGaaaca                            >  1:713246/1‑141 (MQ=255)                                                                                                                    cGAGGAAGGGTGCTGCGGTCGGCCACGCGCAGCAGCGTCACAAAGACCGTCGTTTTATTGGTATGACAGAGCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGaaaaa                            <  1:699713/143‑1 (MQ=255)                                                                                                                     gATGAAAGGTGCTGCGGTCGGACACGCGCAGCTCAAATACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAAc                           <  2:1126089/143‑1 (MQ=255)                                                                                                                        ggacggggctgcGGCTGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCGATGATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTc                        <  2:912248/136‑1 (MQ=255)                                                                                                                        gAAAGGTGCTGCGGTCGGACACGGGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTc                        <  1:969457/143‑1 (MQ=255)                                                                                                                             gTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGaa                   <  1:818252/143‑1 (MQ=255)                                                                                                                                ctgcGGTCGGACACGCGCAGCAGGGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAACACCTCTGGAAGCg                >  2:1152382/1‑143 (MQ=255)                                                                                                                                        ggACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAAGGTCCGGAGGCGTGTGACCg        >  2:835376/1‑143 (MQ=255)                                                                                                                                          acacGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGCTATCGAAAAACGTCTGGAAGCGTTTGTCCGTa      >  1:639975/1‑143 (MQ=255)                                                                                                                                              gcgcAGCAGCGTTACAAAGACAGTCGTTTTATTGGTCTGACAGAGCCGTCGATTATCTCCGCTGAACCTCCTAACCCGCTGGTCAACTAATTGATCATCATACCACATATCTAAAAATGTCTGGAAGCGGTTTTCCGTATCga  >  1:67430/1‑142 (MQ=255)                                                                                                                                              gcgcAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAGTTGAGCATCATACAAGATATCGAAAAACGTCTGGACGCGGTTGTGCGTATCGc  >  2:471988/1‑143 (MQ=255)                                                                                                                                              gcgcAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGACATCGAAAAACGTCTCGACGCGTTTCTACGtctccc  >  2:230831/1‑141 (MQ=255)                                                                                                                                              |                                                                                                                                               GGCGGTCACTCAATTAACGAAAACGAGTATTTGTATGCCCGTCGCGTCGGAAACCAGCTGGGCCTGCGTGAGCTGAATATCTGCACCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGAAGCGTTTGTCCGTATCGC  >  NC_000913/2926770‑2927053

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.