Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 4,001,645 Δ5 bp coding (220‑224/951 nt) corA → magnesium/nickel/cobalt transporter

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 4001645 4001649 5 52 [0] [0] 51 corA magnesium/nickel/cobalt transporter

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 40016440 (0.000)51 (0.790) 45/284 0.4 100% coding (219/951 nt) corA magnesium/nickel/cobalt transporter
?NC_000913 4001650 = 0 (0.000)coding (225/951 nt) corA magnesium/nickel/cobalt transporter

CAGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGT  >  NC_000913/4001502‑4001785
                                                                                                                                              |                                                                                                                                             
tggTATGGAGTGATGTTGTCGAGCCGGACGTCGACGAGCGACGGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCat                                                                                                                                               <  2:324868/141‑1 (MQ=255)
   tATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctc                                                                                                                                            >  1:641176‑M1/1‑140 (MQ=255)
        aTTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttct                                                                                                                                       >  1:317220‑M1/1‑135 (MQ=255)
        aTTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACACCGACGAATCGGAACATTACGTTGAAGACGACGACGGCCTGCATctccttct                                                                                                                                       <  2:413156‑M1/143‑9 (MQ=255)
               ttGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctcctgcttctcact                                                                                                                                >  2:1124150‑M1/1‑128 (MQ=255)
                tGTCGAACCGCACGACGACGAGCGACTGCGCGTACAAGCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttcttt                                                                                                                               <  1:66023‑M1/143‑17 (MQ=255)
                 gccgaACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttg                                                                                                                              <  1:643208‑M1/141‑18 (MQ=255)
                   cGACCCGGACGACGACGCGCGACCGCGCGTACAAGCTGACCTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGCAAGACATCGAAGCATCGGCACGTTTCTTTGTAGACGACGACGGCCTGCATctccttcttcttctttgaa                                                                                                                            <  2:441523‑M1/143‑20 (MQ=255)
                         ggACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTCCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagctgcg                                                                                                                      >  2:584372‑M1/1‑118 (MQ=255)
                                gacgaGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatc                                                                                                               >  1:193474‑M1/1‑111 (MQ=255)
                                   gaGCGACTGCGCGTACAATCTGGTCTTGGCCAGGGGCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacg                                                                                                            <  2:95863‑M1/143‑36 (MQ=255)
                                   gaGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagctgcggcagatcacg                                                                                                            >  1:1027338‑M1/1‑108 (MQ=255)
                                    aGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcaggc                                                                                                           <  1:682433‑M1/143‑37 (MQ=255)
                                      cgcctgcGCGTACAATCTGACCTTGGCCTGGTTCTGCCACCCCCCCCTGAACTGTAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACAACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccg                                                                                                         <  1:157797‑M1/140‑39 (MQ=255)
                                      cGACTGCGCGTACAATCTGAACTTGGCCCGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccg                                                                                                         <  2:1023049‑M1/143‑39 (MQ=255)
                                        aCTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcgcgccggt                                                                                                       >  2:211308‑M1/1‑103 (MQ=255)
                                          tGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggcagatcacgccggtaa                                                                                                     >  2:37592‑M1/1‑101 (MQ=255)
                                           gcgcGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaac                                                                                                    >  2:62329‑M1/1‑100 (MQ=255)
                                            ggcgtACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAGctccttcttcttctttgaagatgcggaagatcacgccggtaact                                                                                                   <  2:198919‑M1/142‑45 (MQ=255)
                                                tACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGGAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccac                                                                                               >  1:943530‑M1/1‑95 (MQ=255)
                                                tACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccac                                                                                               >  1:943578‑M1/1‑95 (MQ=255)
                                                   aaTCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgt                                                                                            <  1:771908‑M1/143‑52 (MQ=255)
                                                                 cAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatcc                                                                              >  1:346345‑M1/1‑78 (MQ=255)
                                                                      ccTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatgacgccggtaactccactgtggcatttaccatccgtgat                                                                         >  1:811030‑M1/1‑73 (MQ=255)
                                                                      ccTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatcggtgat                                                                         >  1:811024‑M1/1‑73 (MQ=255)
                                                                       cTGGCAGCCCGGCCGGACCTGGAAGGCATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatg                                                                        <  2:79715‑M1/143‑72 (MQ=255)
                                                                       cTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatg                                                                        <  1:503794‑M1/143‑72 (MQ=255)
                                                                       cTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCGTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcgcgccgagaacgccactgtggcatgtaccatccgtgctg                                                                        >  1:289922‑M1/1‑72 (MQ=255)
                                                                        tGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttgtgcgaggatgcggaagctcacgccggtaactccactgtggcatttaccatccgtgatgg                                                                       >  1:376440‑M1/1‑71 (MQ=255)
                                                                                cgcccgGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgt                                                               <  1:1099332‑M1/143‑81 (MQ=255)
                                                                                   ccgGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAActccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgttta                                                            <  1:884586‑M1/143‑84 (MQ=255)
                                                                                       acccggaagaCATCGAAGCCTCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactct                                                        <  1:24013‑M1/139‑88 (MQ=255)
                                                                                         caacaagacgTCGACGCATCGGGACGCTTCCTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtacctccactgtggcatttaccatccgtgatggtcgtctgtttactctgc                                                      <  1:256530‑M1/139‑90 (MQ=255)
                                                                                            gAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgcccgtaactccactgtcgcatttaccatccgcgctggtcgccggtgtcctctgcgtg                                                   >  2:716160‑M1/1‑51 (MQ=255)
                                                                                              aGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatgcgtgatggtcggatgtttactctgcgtgag                                                 >  1:182084‑M1/1‑49 (MQ=255)
                                                                                                 cATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgctggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgt                                              <  1:734959‑M1/143‑98 (MQ=255)
                                                                                                  aTCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttcttcgcagatgcggcagatcacgccggtcactccactgtggcatttaccatccgtactggccgcctctttactctgcgtcagcctc                                             >  2:794252‑M1/1‑45 (MQ=255)
                                                                                                  aTCGAAGCATCGGCACGTTTCTTTGAAGACGAAGACGGCTTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtg                                             >  1:50129‑M1/1‑45 (MQ=255)
                                                                                                   tCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgcctgtttactctgcgtgcccgtga                                            >  1:282304‑M1/1‑44 (MQ=255)
                                                                                                   tCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctcctgcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtga                                            >  1:139588‑M1/1‑44 (MQ=255)
                                                                                                    cGAAGCATGGGCACGTTTCTTTGAAGACGACGGCGGCCTGCAGctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaa                                           <  2:213165‑M1/143‑101 (MQ=255)
                                                                                                        gCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgc                                       <  1:74906‑M1/143‑105 (MQ=255)
                                                                                                             ggCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgcagatgcggaagctagggggggtaactccactgtggcgtttaccctccgtgctggtcgtctgtttactctgcgtgagcgggcgctgcccgct                                  >  1:1159248‑M1/1‑34 (MQ=255)
                                                                                                                   tttCGTTGCAGACGACGACGGCCTGCCTctctttcttcttctttgaagatgcggaagatcacgccggtatctccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgt                            <  2:809257‑M1/143‑116 (MQ=255)
                                                                                                                    ttCTTTGCAGACGACGACGGTCTGCATctccttcttcttctttgcagctgcggaagatcccgccggtaactccactgtggcatttaccatccgtgctggtcgaacatacactctgcgtgagcgtgaactgcccgcttttcgtc                           <  2:139588‑M1/143‑117 (MQ=255)
                                                                                                                    ttCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtc                           >  1:4886‑M1/1‑27 (MQ=255)
                                                                                                                           aaGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgggaactgcgcgcttttcggctgtatcg                    >  1:723586‑M1/1‑20 (MQ=255)
                                                                                                                              acgacgacgGCCTGCATctccttcatcttcttggaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtat                 <  1:211308‑M1/143‑127 (MQ=255)
                                                                                                                                  cgacgGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgggatggtcgtctgattagtctgcgtgagcgtgaaatgccggcttttggtctgtagcgactgcgc             >  2:1034181‑M1/1‑13 (MQ=255)
                                                                                                                                   gacgGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttacgatccgtgatggtcgtctgtttactctgcgtgcgcgggaactgccctctcttcgtctgtatcctacgcggc            >  2:922488‑M1/1‑12 (MQ=255)
                                                                                                                                    acgGCCTGTATctccttcttcttctttgaagatgcggaagatcacgccggtaactccacggtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtatgcgtgc           <  2:176080‑M1/143‑133 (MQ=255)
                                                                                                                                             aTctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatccccgtcgggatactttgagtgcgacagaactgcccgcttttcgtctgtgtcgtgtgcgtgcccgtagcca  >  2:825428‑M1/1‑2 (MQ=255)
                                                                                                                                              |                                                                                                                                             
CAGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGT  >  NC_000913/4001502‑4001785

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: