Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	NC_000913	4,001,645	Δ5 bp	coding (220‑224/951 nt)	corA →	magnesium/nickel/cobalt transporter

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	4001645	4001649	5	52 [0]	[0] 51	corA	magnesium/nickel/cobalt transporter

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4001644	0 (0.000)	51 (0.790)	45/284	0.4	100%	coding (219/951 nt)	corA	magnesium/nickel/cobalt transporter
	?	NC_000913	4001650 =	0 (0.000)					coding (225/951 nt)	corA	magnesium/nickel/cobalt transporter

CAGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGT  >  NC_000913/4001502‑4001785                                                                                                                                               |                                                                                                                                              tggTATGGAGTGATGTTGTCGAGCCGGACGTCGACGAGCGACGGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCat                                                                                                                                               <  2:324868/141‑1 (MQ=255)    tATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctc                                                                                                                                            >  1:641176‑M1/1‑140 (MQ=255)         aTTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttct                                                                                                                                       >  1:317220‑M1/1‑135 (MQ=255)         aTTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACACCGACGAATCGGAACATTACGTTGAAGACGACGACGGCCTGCATctccttct                                                                                                                                       <  2:413156‑M1/143‑9 (MQ=255)                ttGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctcctgcttctcact                                                                                                                                >  2:1124150‑M1/1‑128 (MQ=255)                 tGTCGAACCGCACGACGACGAGCGACTGCGCGTACAAGCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttcttt                                                                                                                               <  1:66023‑M1/143‑17 (MQ=255)                  gccgaACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttg                                                                                                                              <  1:643208‑M1/141‑18 (MQ=255)                    cGACCCGGACGACGACGCGCGACCGCGCGTACAAGCTGACCTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGCAAGACATCGAAGCATCGGCACGTTTCTTTGTAGACGACGACGGCCTGCATctccttcttcttctttgaa                                                                                                                            <  2:441523‑M1/143‑20 (MQ=255)                          ggACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTCCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagctgcg                                                                                                                      >  2:584372‑M1/1‑118 (MQ=255)                                 gacgaGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatc                                                                                                               >  1:193474‑M1/1‑111 (MQ=255)                                    gaGCGACTGCGCGTACAATCTGGTCTTGGCCAGGGGCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacg                                                                                                            <  2:95863‑M1/143‑36 (MQ=255)                                    gaGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagctgcggcagatcacg                                                                                                            >  1:1027338‑M1/1‑108 (MQ=255)                                     aGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcaggc                                                                                                           <  1:682433‑M1/143‑37 (MQ=255)                                       cgcctgcGCGTACAATCTGACCTTGGCCTGGTTCTGCCACCCCCCCCTGAACTGTAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACAACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccg                                                                                                         <  1:157797‑M1/140‑39 (MQ=255)                                       cGACTGCGCGTACAATCTGAACTTGGCCCGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccg                                                                                                         <  2:1023049‑M1/143‑39 (MQ=255)                                         aCTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcgcgccggt                                                                                                       >  2:211308‑M1/1‑103 (MQ=255)                                           tGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggcagatcacgccggtaa                                                                                                     >  2:37592‑M1/1‑101 (MQ=255)                                            gcgcGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaac                                                                                                    >  2:62329‑M1/1‑100 (MQ=255)                                             ggcgtACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAGctccttcttcttctttgaagatgcggaagatcacgccggtaact                                                                                                   <  2:198919‑M1/142‑45 (MQ=255)                                                 tACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGGAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccac                                                                                               >  1:943530‑M1/1‑95 (MQ=255)                                                 tACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccac                                                                                               >  1:943578‑M1/1‑95 (MQ=255)                                                    aaTCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgt                                                                                            <  1:771908‑M1/143‑52 (MQ=255)                                                                  cAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatcc                                                                              >  1:346345‑M1/1‑78 (MQ=255)                                                                       ccTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatgacgccggtaactccactgtggcatttaccatccgtgat                                                                         >  1:811030‑M1/1‑73 (MQ=255)                                                                       ccTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatcggtgat                                                                         >  1:811024‑M1/1‑73 (MQ=255)                                                                        cTGGCAGCCCGGCCGGACCTGGAAGGCATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatg                                                                        <  2:79715‑M1/143‑72 (MQ=255)                                                                        cTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatg                                                                        <  1:503794‑M1/143‑72 (MQ=255)                                                                        cTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCGTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcgcgccgagaacgccactgtggcatgtaccatccgtgctg                                                                        >  1:289922‑M1/1‑72 (MQ=255)                                                                         tGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttgtgcgaggatgcggaagctcacgccggtaactccactgtggcatttaccatccgtgatgg                                                                       >  1:376440‑M1/1‑71 (MQ=255)                                                                                 cgcccgGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgt                                                               <  1:1099332‑M1/143‑81 (MQ=255)                                                                                    ccgGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAActccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgttta                                                            <  1:884586‑M1/143‑84 (MQ=255)                                                                                        acccggaagaCATCGAAGCCTCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactct                                                        <  1:24013‑M1/139‑88 (MQ=255)                                                                                          caacaagacgTCGACGCATCGGGACGCTTCCTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtacctccactgtggcatttaccatccgtgatggtcgtctgtttactctgc                                                      <  1:256530‑M1/139‑90 (MQ=255)                                                                                             gAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgcccgtaactccactgtcgcatttaccatccgcgctggtcgccggtgtcctctgcgtg                                                   >  2:716160‑M1/1‑51 (MQ=255)                                                                                               aGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatgcgtgatggtcggatgtttactctgcgtgag                                                 >  1:182084‑M1/1‑49 (MQ=255)                                                                                                  cATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgctggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgt                                              <  1:734959‑M1/143‑98 (MQ=255)                                                                                                   aTCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttcttcgcagatgcggcagatcacgccggtcactccactgtggcatttaccatccgtactggccgcctctttactctgcgtcagcctc                                             >  2:794252‑M1/1‑45 (MQ=255)                                                                                                   aTCGAAGCATCGGCACGTTTCTTTGAAGACGAAGACGGCTTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtg                                             >  1:50129‑M1/1‑45 (MQ=255)                                                                                                    tCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgcctgtttactctgcgtgcccgtga                                            >  1:282304‑M1/1‑44 (MQ=255)                                                                                                    tCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctcctgcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtga                                            >  1:139588‑M1/1‑44 (MQ=255)                                                                                                     cGAAGCATGGGCACGTTTCTTTGAAGACGACGGCGGCCTGCAGctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaa                                           <  2:213165‑M1/143‑101 (MQ=255)                                                                                                         gCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgc                                       <  1:74906‑M1/143‑105 (MQ=255)                                                                                                              ggCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgcagatgcggaagctagggggggtaactccactgtggcgtttaccctccgtgctggtcgtctgtttactctgcgtgagcgggcgctgcccgct                                  >  1:1159248‑M1/1‑34 (MQ=255)                                                                                                                    tttCGTTGCAGACGACGACGGCCTGCCTctctttcttcttctttgaagatgcggaagatcacgccggtatctccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgt                            <  2:809257‑M1/143‑116 (MQ=255)                                                                                                                     ttCTTTGCAGACGACGACGGTCTGCATctccttcttcttctttgcagctgcggaagatcccgccggtaactccactgtggcatttaccatccgtgctggtcgaacatacactctgcgtgagcgtgaactgcccgcttttcgtc                           <  2:139588‑M1/143‑117 (MQ=255)                                                                                                                     ttCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtc                           >  1:4886‑M1/1‑27 (MQ=255)                                                                                                                            aaGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgggaactgcgcgcttttcggctgtatcg                    >  1:723586‑M1/1‑20 (MQ=255)                                                                                                                               acgacgacgGCCTGCATctccttcatcttcttggaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtat                 <  1:211308‑M1/143‑127 (MQ=255)                                                                                                                                   cgacgGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgggatggtcgtctgattagtctgcgtgagcgtgaaatgccggcttttggtctgtagcgactgcgc             >  2:1034181‑M1/1‑13 (MQ=255)                                                                                                                                    gacgGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttacgatccgtgatggtcgtctgtttactctgcgtgcgcgggaactgccctctcttcgtctgtatcctacgcggc            >  2:922488‑M1/1‑12 (MQ=255)                                                                                                                                     acgGCCTGTATctccttcttcttctttgaagatgcggaagatcacgccggtaactccacggtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtatgcgtgc           <  2:176080‑M1/143‑133 (MQ=255)                                                                                                                                              aTctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatccccgtcgggatactttgagtgcgacagaactgcccgcttttcgtctgtgtcgtgtgcgtgcccgtagcca  >  2:825428‑M1/1‑2 (MQ=255)                                                                                                                                               |                                                                                                                                              CAGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGT  >  NC_000913/4001502‑4001785

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑