Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
JC JC	NC_000913	1,589,990	+G :: IS2 (+) +4 bp	pseudogene (87‑90/1227 nt)	ydeT ←	pseudogene; putative outer membrane protein

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1589990 =	0 (0.000)	58 (1.140)	49/284	0.1	100%	pseudogene (90/1227 nt)	ydeT	pseudogene; putative outer membrane protein
	?	NC_000913	= 1651548	NA (NA)					noncoding (706/706 nt)	IS2	repeat region
*	?	NC_000913	= 1589993	0 (0.000)	65 (1.270)	57/284	0.0	100%	pseudogene (87/1227 nt)	ydeT	pseudogene; putative outer membrane protein
	?	NC_000913	4498180 =	NA (NA)					intergenic (+240/‑92)	intB/insC1	pseudogene, integrase homology;IS, phage, Tn; Phage‑related functions and prophages; KpLE2 phage‑like element; P4‑like integrase/IS2 repressor TnpA

ACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1589852‑1589993 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACA  >  NC_000913/4498180‑4498318                                                                                                                                                                                                                                                                                           ACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAG                                                                                                                                            >  1:438546/1‑143   tgtAAAATGGCGTATCGTTACTCCCAAGCTGCTGAGAGATGTTTATTTGTTCCTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTA                                                                                                                                          <  2:769807/140‑1     AAAAATGTCGTACCGTAATTTCCAAGCTGCTGGGAGAGGCGTATTTGTTCCTGACCACGCTTACGGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAGGTAGA                                                                                                                                        >  2:605508/1‑143       aaacgcCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCACGCTTACTGTAGAACAGATTAAAATATTCAATGAAGGGTGTCTTCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACT                                                                                                                                      <  1:713178/137‑1        AATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTG                                                                                                                                     <  1:310418/143‑1         ATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGAGTGG                                                                                                                                    >  1:227609/1‑143          TGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTTGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGC                                                                                                                                   <  1:280514/143‑1           GTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGACGCTTTACGGTGTAAGTAAACTGCCC                                                                                                                                  >  2:699525/1‑143             CGTGCCGTAATTTGCCAGCTGCTGAGAGATGCTTATTGGTGCCTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATGAATTGTGTCTGCTCCTTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCC                                                                                                                                <  2:599943/143‑1               TACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCT                                                                                                                              >  2:260635/1‑143               TACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCT                                                                                                                              >  1:572116/1‑143               TACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCACGCTTACTCTAGAACCGATTAAAATAATCAATAACTTGTGTCTGCTCATTGGTGTCTCCGGTAGGCGGCTTGACGGGGCAAGTACCCTGTCCCCCT                                                                                                                              >  1:810522/1‑143                    TAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCTGAATC                                                                                                                         <  1:395948/143‑1                      actgCCAATCTGCTGAGAGATGCTTATGTGTTCCTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAGATTGTGTCTGCTCATTGGTGGCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCTGAATCTC                                                                                                                       <  2:98038/139‑1                          CCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCTGAATCTCCAGA                                                                                                                   >  2:278414/1‑143                                  CTGAGAGATGCTTATTTGTTCCTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAAT                                                                                                           <  1:732959/143‑1                                       AGATGCTTATTTGTTCCTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCAC                                                                                                      <  1:466939/143‑1                                          TGCTTATTTGTTCCTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCCCTca                                                                                                   >  2:469873/1‑141                                                TTTGTTCCTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCTGAATCTCCGGACAACCAAGATCACTTAAATAAG                                                                                             >  2:76479/1‑143                                                     TCCTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATA                                                                                        >  2:335916/1‑143                                                      CCTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAG                                                                                       <  1:218604/143‑1                                                       CTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGT                                                                                      >  2:756281/1‑143                                                        TGACCGCGCTTACTGTAGAACAGATTAAGATAATCAATAAATTGTGTGTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTC                                                                                     <  2:128260/143‑1                                                        TGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCTGAATCTCCAGCCAACCAATAGCCCTTAAATAAGTGATAATC                                                                                     >  1:810514/1‑143                                                        TGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTC                                                                                     >  1:214774/1‑143                                                          ACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTT                                                                                   <  2:281778/143‑1                                                           CCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAATCTTA                                                                                  >  1:833531/1‑143                                                                 TTACTGAAGAACAGATTAAAATAATAAATCAATTGTGTCTGCTCATTGGTGTCCCCGGTAGGGGGCTTGACGCTGTAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTA                                                                            <  2:328579/143‑1                                                                  TACTGTAGAACAGATTAAAATAATGAATAAATTGTGTCTGCTCATTGGTGACTCCGGTAGGAGGCTTGACGGTGGAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTCAAATAAGTGATAGTCTTAATCCTAG                                                                           >  1:578435/1‑143                                                                  TACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCTGACTCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACCAG                                                                           >  1:862905/1‑143                                                                  TACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG                                                                           <  2:274584/143‑1                                                                     tgcAGACCAGATTAAAACAAGCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTT                                                                        <  1:802541/140‑1                                                                     TGTAGAACAGATTAAAATAATCAATACATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTACGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACGTAAGTAAGTGATAGTCTTACTACTAGTTT                                                                        >  2:836917/1‑143                                                                     TGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGATT                                                                        >  2:447274/1‑143                                                                      GTAGAACAGATTAGAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTT                                                                       <  2:733402/143‑1                                                                      GTACAACAGATTACAATAATCAATAAATTGTGTGTGCTCATTTGTGTCTGCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGACCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTT                                                                       <  2:888044/143‑1                                                                       TAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTT                                                                      >  1:646089/1‑143                                                                        AGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTA                                                                     <  1:787454/143‑1                                                                        AGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTA                                                                     <  1:783586/143‑1                                                                          AACAGATTACAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGA                                                                   <  2:738538/143‑1                                                                           ACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATCATAGTTTTTAGAC                                                                  >  2:133730/1‑143                                                                             AGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTA                                                                <  2:71800/143‑1                                                                               ATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGT                                                              >  1:450945/1‑143                                                                                   AAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCTGAATCTCCAGACAGCCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATT                                                          >  1:520461/1‑143                                                                                       AATCAATAAATTGTGTCTGCTCATTGGTGCCTCTTGTAGGTGGCTTGACGGTGTAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAG                                                      <  1:708273/143‑1                                                                                        ATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGA                                                     <  1:278414/143‑1                                                                                         TCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAA                                                    <  1:159473/143‑1                                                                                          CAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAAC                                                   <  1:756281/143‑1                                                                                                ATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGCTGA                                             >  1:700089/1‑143                                                                                                  gggGTCGGCTCAGTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATT                                           <  1:149434/140‑1                                                                                                          CTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTT                                   >  1:828634/1‑143                                                                                                                 gggccgCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATCAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCG                            <  1:350945/137‑1                                                                                                                 GTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACATAAATAAGTGATAGTCTGAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGAGGTCGTAGAGCCG                            >  2:263285/1‑143                                                                                                                  TGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGG                           <  1:824257/143‑1                                                                                                                   gcCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCTGAAACTCCAGACAACCAATATCACTTAAAGAAGTGATAGTCTTAATTCTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGA                          <  1:326605/141‑1                                                                                                                   gacaccaGTAGGAGGAATGACGGTGTAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGA                          <  1:279878/136‑1                                                                                                                       CCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAA                      <  2:612233/143‑1                                                                                                                        CGGTAGGAGTCTTGACGGTGTAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTTATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAAC                     <  2:479910/143‑1                                                                                                                              GAGGCTTGACGGTGTAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGAC               >  2:12091/1‑143                                                                                                                                   TTGACGGTGTAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTTTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGGGAAACGCAGACGACGT          >  1:317084/1‑143                                                                                                                                     tccgaTGTAAGTAGACTGTCCCCGTTTATCCCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGACCAGATGATTGATGTCTTAGGGCCTGAGAAACGCAGACGGCGTAC        <  2:324968/138‑1                                                                                                                                     GACGGTGTAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACCTAACTCAGTGATAGTCTTAATACTAGTCTTTAGACTACTCATAGAAATACAGATGACTGATGTCTTAGGGCCGGACAAACGCAGACAGCGTAC        >  2:546103/1‑143                                                                                                                                          TGTAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACAC   >  2:26890/1‑143                                                                                                                                          TGTAAGTAGACTGGCACACTGAATCTCCAGACAAGCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACAC   <  1:634173/143‑1                                                                                                                                           GTAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAACATCACGTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCTGGAGAAACGCAGACGGCGTACCACACA  <  2:622223/143‑1                                                                                                                                                                                                                                                                                           ACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1589852‑1589993 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACA  >  NC_000913/4498180‑4498318

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.