| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 1,589,990 | +G :: IS2 (+) +4 bp | pseudogene (87‑90/1227 nt) | ydeT ← | pseudogene; putative outer membrane protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1589990 = | 0 (0.000) | 58 (1.140) | 49/284 | 0.1 | 100% | pseudogene (90/1227 nt) | ydeT | pseudogene; putative outer membrane protein |
| ? | NC_000913 | = 1651548 | NA (NA) | noncoding (706/706 nt) | IS2 | repeat region | |||||
| * | ? | NC_000913 | = 1589993 | 0 (0.000) | 65 (1.270) | 57/284 | 0.0 | 100% | pseudogene (87/1227 nt) | ydeT | pseudogene; putative outer membrane protein |
| ? | NC_000913 | 4498180 = | NA (NA) | intergenic (+240/‑92) | intB/insC1 | pseudogene, integrase homology;IS, phage, Tn; Phage‑related functions and prophages; KpLE2 phage‑like element; P4‑like integrase/IS2 repressor TnpA | |||||
Only 100 of 126 total aligned reads displayed.
TGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAACCACTCATTCGACTGTAGGCACTGTCGGATAAGTTATAAAAACCTTGCGTAGAATAGCGATATCCTGCGACCTGGATATTGGTTCCACAACAAGTTTATTGCTGCACTTGTTGAAGAGAGTATTTGCAAAAACATTTTA > NC_000913/1589848‑1590132 | tGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCCTATTTGTTCCTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCAATGGTGTCTCAGGTAGCAGACTTGACGgtg > 2:437803/1‑143 (MQ=255)accttgcagaggcgttcgagcattgtaacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccag > 2:166741‑M1/143‑143 (MQ=255)accttgcagaggcgttcgagcattataacgaagggcatccgcatagtgcgctgggttatcgctcgccacgggaatagctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccag > 1:907952‑M1/143‑143 (MQ=255)accctgcaggggtcttcgagcattataaccattggcggccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccag > 2:898657‑M1/143‑143 (MQ=255) ccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggataagtgataacagatgtctggaaatataggggcaaatccaGt < 1:264522‑M1/2‑1 (MQ=255) cttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTa < 2:706129‑M1/3‑1 (MQ=255) ttgcagaggcgttcgagcattataacgaatggcagccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTaa > 1:720162‑M1/140‑143 (MQ=255) aCTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAg > 1:438546‑M1/1‑142 (MQ=255) tgtaaaatggCGTATCGTTACTCCCAAGCTGCTGAGAGATGTTTATTTGTTCCTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAgta < 2:769807‑M1/140‑4 (MQ=255) aggggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTAACCAc > 2:633695‑M1/136‑143 (MQ=255) gaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTAACCACt > 1:95167‑M1/135‑143 (MQ=255) aaacgccgtaccgTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCACGCTTACTGTAGAACAGATTAAAATATTCAATGAAGGGTGTCTTCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAgtagact < 1:713178‑M1/137‑8 (MQ=255) aaTGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAgtagactg < 1:310418‑M1/143‑9 (MQ=255) aTGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAgtagagtgg > 1:227609‑M1/1‑134 (MQ=255) tGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTTGTGTCTCCGGTAGGAGGCTTGACGGTGTAAgtagactggc < 1:280514‑M1/143‑11 (MQ=255) gTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGACGCTTTACGGTGTAAgtaaactgccc > 2:699525‑M1/1‑132 (MQ=255) tcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTAACCACTCATTCGa > 1:771941‑M1/128‑143 (MQ=255) cGTGCCGTAATTTGCCAGCTGCTGAGAGATGCTTATTGGTGCCTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATGAATTGTGTCTGCTCCTTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAgtagactggcccc < 2:599943‑M1/143‑14 (MQ=255) gagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggtgaagtgataacagatgtgtggaaatataggggcgaatccaGTAACCACTCATTCGACt < 1:339436‑M1/18‑1 (MQ=255) tACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAgtagactggccccct > 1:572116‑M1/1‑128 (MQ=255) taacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgttatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTAACCGCTCATTCGACTGTAGGCAc < 1:473465‑M1/26‑1 (MQ=255) aacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaggtataggggcaaatccaGCAACCACTCATTCGACTGTAGGCACt < 2:838352‑M1/27‑1 (MQ=255) ccAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAgtagactggccccctgaatctccaga > 2:278414‑M1/1‑117 (MQ=255) gcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcgagtccaGTAACCACTCATTCGACTGTAGGGACTGTCGGATa < 1:704919‑M1/35‑1 (MQ=255) cgtccgtctagggcgatgcgttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgtgttacgtgataacagatgtctggaaatataggggcaaatccaGTAACCACTCATTCGACTGTAGGCACTGTCGGATaa > 2:673837‑M1/108‑143 (MQ=255) catccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTAACCACTCATTCGACTGTAGGCACTGTCGGATaa < 2:628591‑M1/36‑1 (MQ=255) catccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaagataggggcaaatccaGTAACCACTCATTCGACTGTAGGCACTGTCGgatca < 1:540675‑M1/36‑3 (MQ=255) atccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTAACCACTCATTCGACTGTAGGCACTGTCGGATAAg < 1:599005‑M1/37‑1 (MQ=255) ctgAGAGATGCTTATTTGTTCCTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAgtagactggccccctgaatctccagacaaccaat < 1:732959‑M1/143‑35 (MQ=255) agaTGCTTATTTGTTCCTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAgtagactggccccctgaatctccagacaaccaatatcac < 1:466939‑M1/143‑40 (MQ=255) gtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTAACCACTCATTCGACTGTAGGCACTGTCGGATAAGTTATaaaaa > 2:505185‑M1/98‑143 (MQ=255) cgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTAACCACTCATTCGACTGTAGGCACTGTCGGATAAGTTATAAAAACCt < 1:122325‑M1/49‑1 (MQ=255) gctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagttataacagatgtctggaaatataggggcaaatccaGTAACCACTCATTCGACTGTAGGCACTGTCGGCTAAGTTATAACAACCtt < 2:343471‑M1/50‑1 (MQ=255) tCCTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAgtagactggccccctgaatctccagacaaccaatatcacttaaataagtgata > 2:335916‑M1/1‑90 (MQ=255) ccTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAgtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatag < 1:218604‑M1/143‑55 (MQ=255) tcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggacatataggggcaaatccaGTAACCACTCATTCGACTGTAAGCACTGTCGGATAAACTCTAAAAACCGTACGTAGAAt < 2:214739‑M1/59‑1 (MQ=255) cTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAgtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagt > 2:756281‑M1/1‑88 (MQ=255) tGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAgtagactggccccctgaatctccagccaaccaatagcccttaaataagtgataatc > 1:810514‑M1/1‑87 (MQ=255) ccACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAgtagactggccccctgaatctccagacaaccaatatcacttaaataagtgataatctta > 1:833531‑M1/1‑84 (MQ=255) ttACTGAAGAACAGATTAAAATAATAAATCAATTGTGTCTGCTCATTGGTGTCCCCGGTAGGGGGCTTGACGCTGTAAgtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatacta < 2:328579‑M1/143‑66 (MQ=255) tACTGTAGAACAGATTAAAATAATGAATAAATTGTGTCTGCTCATTGGTGACTCCGGTAGGAGGCTTGACGGTGGAAgtagactggccccctgaatctccagacaaccaatatcactcaaataagtgatagtcttaatcctag > 1:578435‑M1/1‑77 (MQ=255) tACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAgtagactggccccctgactctccagacaaccaatatcacttaaataagtgatagtcttaataccag > 1:862905‑M1/1‑77 (MQ=255) tACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAgtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactag < 2:274584‑M1/143‑67 (MQ=255) tgcagacCAGATTAAAACAAGCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAgtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagttt < 1:802541‑M1/140‑70 (MQ=255) tGTAGAACAGATTAAAATAATCAATACATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTACgtagactggccccctgaatctccagacaaccaatatcacgtaagtaagtgatagtcttactactagttt > 2:836917‑M1/1‑74 (MQ=255) tGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAgtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagatt > 2:447274‑M1/1‑74 (MQ=255) gTACAACAGATTACAATAATCAATAAATTGTGTGTGCTCATTTGTGTCTGCGGTAGGAGGCTTGACGGTGTAAgtagactggacccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttt < 2:888044‑M1/143‑71 (MQ=255) aGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAgtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagttttta < 1:783586‑M1/143‑73 (MQ=255) aGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAgtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagttttta < 1:787454‑M1/143‑73 (MQ=255) ctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTAACCACTCATTCGACTGTAGGCACTGTCGGATAAGTTATAAAAACCTTGCGTAGAATAGCGATATCCTGCGACCTg < 2:325617‑M1/78‑1 (MQ=255) aaCAGATTACAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAgtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttaga < 2:738538‑M1/143‑75 (MQ=255) tgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTAACCACTCATTAGACTGTAGGCACTGTCGGATAAGTTATAAAAAACTTGCGAAGAATAGCAATATCCTGCGAACTgg < 2:25750‑M1/79‑1 (MQ=255) aCAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAgtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatcatagtttttagac > 2:133730‑M1/1‑68 (MQ=255) gcggcagcgggcgtgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTAACCACTCATTCGACTGTAGGCACTGTCGGATAAGTTATAAAAACCTTGCGTAGAATAGCGATATCCTGCGACCTGGa > 1:805606‑M1/64‑143 (MQ=255) cggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTAACCACTCATTCGACTGTAGGCACTGTCGGATAAGTTATAAAAACCTTGCGTAGAATAGCGATATCCTGCGACCTGGat < 1:313923‑M1/81‑1 (MQ=255) aGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAgtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagacta < 2:71800‑M1/143‑78 (MQ=255) aTTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAgtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagt > 1:450945‑M1/1‑64 (MQ=255) cagcgggcttgtaatgggttaagtgataacagatggctggaaatatgggggcaaatcaaGTAACCACTCATTCGACTGTAGGAACTGTCGGATAAGTTATAAAAACCTTGCGTAGAATAGCGATATCCTGCGACCTGGATAtt > 1:492398‑M1/60‑143 (MQ=255) agcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTAACCACTCATTCGACTGTAGGCACTGTCGGAGAAGTTATAAAAACCTTGCGTCGGGCAGCGAAATCCTGCGACCTGGATATTg < 2:397654‑M1/85‑1 (MQ=255) gcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTAACCACTCATTCGACTGTAGGCACTGTCGGATAAGTTATAAAAACCTTGCGTAGAATAGCGATATCCTGCGACCTGGATATTgg > 2:79144‑M1/58‑143 (MQ=255) aaaTAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAgtagactggccccctgaatctccagacagccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcatt > 1:520461‑M1/1‑60 (MQ=255) gggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTAACCACTCATTCGACTGTAGGCACTGTCGGATAAGTTATAAAAACCTTGCGTAGAATAGCGATATCCTGCGCCCTGGATATTGGtt < 2:578306‑M1/88‑1 (MQ=255) gggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTAACCACTCATTCGACTGTAGGCACTGTCGGATAAGTTATAAAAACCTTGCGTAGAATAGCGATATCCTGCGACCTGGATATTGGtt < 1:240665‑M1/88‑1 (MQ=255) ggcttgtaatgggttaagggataacagatgtctggaaatataggggcaaatccaGTAACCACTCATTCGACTGTAGGCACTGTCGGATAAGTTATAAAAACCTTGCGTAGAATAGCGATATCCTGCGACCTGGATATTGGTTc > 1:527045‑M1/55‑143 (MQ=255) attataatgtgttaagtgataactggtgtctggaaatataggggcaaatccaGTAACCACTCATTCGACTGTAGGCACTGTCGGATATGTTATAAAAACCTTGCGTAGAATAGCGATATCCTGCGACCTGGATATTGGTTCca > 2:587675‑M1/53‑143 (MQ=255) atCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAgtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggaga < 1:278414‑M1/143‑89 (MQ=255) tCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAgtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaa < 1:159473‑M1/143‑90 (MQ=255) gtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTAACCACTCATTCGACTGTAGGCACTGTCGGATAAGTTATAAAAACCTTGCGTAGAATAGCGATATCCTGCGACCTGGATATTGGTTCCacaa > 1:515971‑M1/50‑143 (MQ=255) cAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAgtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaac < 1:756281‑M1/143‑91 (MQ=255) taatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTAACCACTCATGCGACTGTAGGCACTGTCGGATAAGTTATAAAAACCTTGCGTAGAATAGCGATATCCTGCGACCTGGATATTGGTTCCacaac > 1:408299‑M1/49‑143 (MQ=255) aTTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAgtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagctga > 1:700089‑M1/1‑47 (MQ=255) gttaagtgataacagatgtctggaaatataggggcaaatccaGTAACCACTCATTCGACTGTAGGCACTGTCGGATAAGTTATAAAAACCTTGCGTAGAATAGCGATATCCTGCGACCTGGATATTGGTTCCACAACAAGttt < 1:745545‑M1/101‑1 (MQ=255) ggggtcggCTCAGTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAgtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgatt < 1:149434‑M1/140‑99 (MQ=255) aagtgataacagatgtctggaaatataggggcaaatccaGTAACCACTCATTCGACTGTAGGCACTGTCGGATAAGTTATAAAAACCTTGCGTAGAATAGCGATATCCTGCGACCTGGATATTGGTTCCACAACAAGTTTAtt < 1:679072‑M1/104‑1 (MQ=255) agtgataacagatgtctggaaatataggggcaaatccaGTAACCACTCATTCGACTGTAGGCACTGTCGGATAAGTTATAAAAACCTTGCGTAGAATAGCGATATCCTGCGACCTGGATATTGGTTCCACAACAAGTTTATtg > 1:706129‑M1/39‑143 (MQ=255) cTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAgtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtctt > 1:828634‑M1/1‑37 (MQ=255) cagatgtctggaaatataggggcaaatccaGTAACCACTCATTCGACTGTAGGCACTGTCGGATAAGTTATAAAAACCTTGCGTAGAATAGCGATATCCTGCGACCTGGATATTGGTTCCACAACAAGTTTATTGCTGCACtt < 2:764578‑M1/113‑1 (MQ=255) atgtctggaaatataggggcaaatccaGTAACCACTCATTCGACTGTAGGCACTGTCGGATAAGTTATAAAAACCTTGCGTAGAATAGCGATATCCTGCGACCTGGATATTGGTTCCACAACAAGTTTATTGCTGCACttgtt > 1:237414‑M1/28‑143 (MQ=255) gtgtCTCCGGTAGGAGGCTTGACGGTGTAAgtagactggccccctgaatctccagacaaccaatatcacataaataagtgatagtctgaatactagtttttagactagtcattggagaacagatgattgaggtcgtagagccg > 2:263285‑M1/1‑30 (MQ=255) gggccgccggtaggAGGCTTGACGGTGTAAgtagactggccccctgaatctccagacaaccaatatcacttaaatcagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccg < 1:350945‑M1/137‑114 (MQ=255) tgtCTCCGGTAGGAGGCTTGACGGTGTAAgtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccgg < 1:824257‑M1/143‑115 (MQ=255) gcctccgGTAGGAGGCTTGACGGTGTAAgtagactggccccctgaaactccagacaaccaatatcacttaaagaagtgatagtcttaattctagtttttagactagtcattggagaacagatgattgatgtcttagggccgga < 1:326605‑M1/141‑116 (MQ=255) gacaccagtaggaggAATGACGGTGTAAgtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccgga < 1:279878‑M1/136‑116 (MQ=255) tggaaatataggggcaaatccaGTAACCACTCATTCGACTGTAGGCACTGTCGGATAAGTTATAAAAACCTTGCGTAGAATAGCGATATCCTGCGACCTGGATATTGGTTCCACAACAAGTTTATTGCTGCACTTGTTGAaga < 2:899844‑M1/121‑1 (MQ=255) gaaatataggggcaaatccaGTAACCACTCATTCGACTGTAGGCACTGTCGGATAAGTTATAAAAACCTTGCGTAGAATAGCGATATCCTGCGACCTGGATATTGGTTCCTCAACAAGTTTATTGCTGCACTTGTTGAagaga > 2:478235‑M1/21‑143 (MQ=255) gaaatataggggcaaatccaGTAACCACTCATTCGACTGTAGGCACTGTCGGATAAGTTATAAAAACCTTGCGTAGAATAGCGATATCCTGCGACCTGGATATTGGTTCCACAACAAGTTTATTGCTGCACTTGTTGAagaga > 1:838352‑M1/21‑143 (MQ=255) ccGGTAGGAGGCTTGACGGTGTAAgtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaa < 2:612233‑M1/143‑120 (MQ=255) cGGTAGGAGTCTTGACGGTGTAAgtagactggccccctgaatctccagacaaccaatatcacttaaataagttatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaac < 2:479910‑M1/143‑121 (MQ=255) gaggCTTGACGGTGTAAgtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagac > 2:12091‑M1/1‑17 (MQ=255) gcaaatccaGTAACCACTCATTCGACTGTAGGCACTGTCGGATAAGTTATAAAAACCTTGCGTAGAATAGCGATATCCTGCGACCTGGATATTGGTTCCACAACAAGTTTATTGCTGCACTTGTTGAAGAGAGTATTTGCaaa > 1:494981‑M1/10‑143 (MQ=255) ttGACGGTGTAAgtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagttttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggggaaacgcagacgacgt > 1:317084‑M1/1‑12 (MQ=255) caaatccaGTAACCACTCATTCGACCGTAGGCACTGTCGGATAAGTTATAAAAACCTTGCGTAGAATATCGTTATCCTGCGACCTGGATATTGGTTCAACAACAAGTTTATTGCTGCACTTGTTGAAGAGAGTATTTGCaaaa > 1:151758‑M1/9‑143 (MQ=255) tccgatgtaagtagactgtccccgtttatccccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaccagatgattgatgtcttagggcctgagaaacgcagacggcgtac < 2:324968‑M1/138‑134 (MQ=255) gACGGTGTAAgtagactggccccctgaatctccagacaaccaatatcacctaactcagtgatagtcttaatactagtctttagactactcatagaaatacagatgactgatgtcttagggccggacaaacgcagacagcgtac > 2:546103‑M1/1‑10 (MQ=255) aatcacgtAACCACGCATTCGACTGTAGGCACTGTCGGATAAGTTATAAAAAGCTGGCGTAGAATAGCGATATCCTGCGACCTGGATATTGGTGCCACAACAAGTTTATTGCTGCACTTGTTGAAGAGAGTATTTGCAAAAAc < 2:749943/137‑1 (MQ=255) caGTAACCACTCATTCGACTGTAGGCACTGTCGGATAAGTTATAAAAACCTTGCGTAGAATAGCGATATCCTGCGACCTGGATATTGGTTCCACAACAAGTTTATTGCTGCACTTGTTGAAGAGAGTATTTGCAAAAACAttt > 1:391621‑M1/3‑143 (MQ=255) caGGAACCACTCATTCGACTGTAGGCACTGTCGGATAAGTTATAAAAACCTTGCGTAGAATAGCGATATCCTGCGACCTGGATATTGGTTCCACAACAAGTTTATTGCTGCACTTGTTGAAGAGAGTATTTGCAAAAACAttt > 1:368589‑M1/3‑143 (MQ=255) tgtAAgtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacac > 2:26890‑M1/1‑5 (MQ=255) tgtAAgtagactggcacactgaatctccagacaagcaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacac < 1:634173‑M1/143‑139 (MQ=255) gtAAgtagactggccccctgaatctccagacaaccaacatcacgtaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggctggagaaacgcagacggcgtaccacaca < 2:622223‑M1/143‑140 (MQ=255) | TGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAACCACTCATTCGACTGTAGGCACTGTCGGATAAGTTATAAAAACCTTGCGTAGAATAGCGATATCCTGCGACCTGGATATTGGTTCCACAACAAGTTTATTGCTGCACTTGTTGAAGAGAGTATTTGCAAAAACATTTTA > NC_000913/1589848‑1590132 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |