Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 458,790 IS186 (–) +6 bp :: Δ1 bp intergenic (+90/‑93) clpX → / → lon ATPase and specificity subunit of ClpX‑ClpP ATP‑dependent serine protease/DNA‑binding ATP‑dependent protease La

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 458790 =0 (0.000)32 (0.810) 29/278 0.4 100% intergenic (+90/‑98) clpX/lon ATPase and specificity subunit of ClpX‑ClpP ATP‑dependent serine protease/DNA‑binding ATP‑dependent protease La
?NC_000913 608008 = NA (NA)noncoding (2/1345 nt) IS186 repeat region
* ? NC_000913 = 4587950 (0.000)47 (1.190) 40/276 0.1 100% intergenic (+95/‑93) clpX/lon ATPase and specificity subunit of ClpX‑ClpP ATP‑dependent serine protease/DNA‑binding ATP‑dependent protease La
?NC_000913 = 609351 NA (NA)noncoding (1345/1345 nt) IS186 repeat region

GCTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCTGAACGCATTGAAATCCCCGTATTGCCGC  >  NC_000913/458655‑458933
                                                                                                                                            |                                                                                                                                          
gCTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTGAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTGGGCGTTGACTGAGGGGGAAACAtg                                                                                                                                          >  2:64107‑M1/1‑141 (MQ=255)
 cgtgccgaagtatccagtgcttcgggcttaccaataggggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGAAACATcc                                                                                                                                         >  2:643970‑M1/135‑143 (MQ=255)
       cctggCAAGGCGGAGGCGCAACAGGCGTCTGGTGCATAATTAATCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataag                                                                                                                                   <  1:322951‑M1/141‑10 (MQ=255)
             aaGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCGTTAATGTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaa                                                                                                                             <  1:168696‑M1/143‑16 (MQ=255)
              ccagttcttcgggcttaccaatatgggccagaattgctgaccagttatcgtgagagtgattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttctgggGCAAcatccccatatccacacc                                                                                                                            <  2:702360‑M1/22‑8 (MQ=255)
                agttcttcgggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTa                                                                                                                          >  2:405749‑M1/120‑143 (MQ=255)
                  ggAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaa                                                                                                                        >  1:681113‑M1/1‑123 (MQ=255)
                  ggAAGCGCAACAGGCATCTGGTGAATAATTAACCATGCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaa                                                                                                                        <  1:179543‑M1/143‑21 (MQ=255)
                   gAAGCGCAACAGGCATCTAGGGAATAAGTAACCATTCCCAGACAATGAGTTAACCAAAAGGGGGGGATTTTATCGGCCATTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaag                                                                                                                       <  2:23052‑M1/143‑22 (MQ=255)
                        gggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaactcttaagttagcgcttatgggGAAACATCACCATATACTGACGTACATGTTaa                                                                                                                  <  2:47359‑M1/32‑1 (MQ=255)
                        gggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaagtcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGAAACAGCCCCAGATACTGACGTACATGTTaa                                                                                                                  <  2:573162‑M1/32‑1 (MQ=255)
                           cttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaagaccacaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAg                                                                                                               <  2:589930‑M1/35‑1 (MQ=255)
                           aCAGGCATCTGCCCAATCATCAACCCTTCCCATACAATTCGTTAACCAAAAAGGGGGGATTTTATCTCCCCCTTAATTCTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgaac                                                                                                               <  1:66435‑M1/143‑30 (MQ=255)
                            cAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGTGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAcaccaccagctctaacttaagggttgaacc                                                                                                              >  1:300056‑M1/1‑113 (MQ=255)
                              accaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaaggtagcgcttatgggGAAACATCCCCATATACTGACGTACACgttaatcggtg                                                                                                            <  2:652688‑M1/38‑6 (MQ=255)
                                    tGGTGAATAATTAACCATTCCCATACCATTGGTTAACCAAAAAGGGGGGATTTTCTCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGTATGTGGGGGAAACAtcccataagcgctatcttaagggttgaaccatctgacg                                                                                                      >  2:639158‑M1/1‑105 (MQ=255)
                                    tGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGTGAAACAtcccataagcgctaacttaagggttgaaccatctgaag                                                                                                      >  2:191661‑M1/1‑105 (MQ=255)
                                    tGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGCCACAtcccataagcgctaacttatgggttgcaccatctgaag                                                                                                      >  1:672010‑M1/1‑105 (MQ=255)
                                    tGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgaaccatctgaag                                                                                                      >  2:571311‑M1/1‑105 (MQ=255)
                                     tgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGAAACATACCCATATACTGACGTACATGTTAATAGATGGCGTGaa                                                                                                     <  2:34073‑M1/45‑1 (MQ=255)
                                     tcggcgagcattgctgaccggttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccactacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGaa                                                                                                     >  2:527037‑M1/99‑143 (MQ=255)
                                     ggTGAAGGATTGACCATTCCCGTACAAGTAGTTAGCCAAGAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgaaccatctgaaga                                                                                                     <  2:256981‑M1/143‑40 (MQ=255)
                                       ggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcacgcgaaacacggcaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGc                                                                                                   <  1:103328‑M1/47‑1 (MQ=255)
                                        gAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgaaccatctgaagaatg                                                                                                  <  1:631601‑M1/143‑43 (MQ=255)
                                          cagaattgctgaccagttatcgtgagagtaattcatcggcacgttcaatgatatcaggcgtaataccacaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGcaca                                                                                                >  1:272590‑M1/94‑143 (MQ=255)
                                          cagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaagcatatcaggcgtaataccacaacgcttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGATAGTAGATGGCGTGAagcaaa                                                                                                <  1:406774‑M1/50‑3 (MQ=255)
                                              ttAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgaaccatctgaagaacgcgacgc                                                                                            >  2:278297‑M1/1‑95 (MQ=255)
                                              tgaactATTTCTATACAATGTATTACCTAGAAATGGGGGGTTTTATCTTCCCGTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgc                                                                                            <  2:35459‑M1/141‑49 (MQ=255)
                                               ttgctgaccagttatcgtgagagtaattcaccggcacgttaaatcatatcaggcgtaataccgcaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCgt                                                                                           >  1:367377‑M1/89‑143 (MQ=255)
                                               ttcctgcccagttatcgtgagagtaattcatcggcacgttaaatcatatcacgcgtaataccacaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCgt                                                                                           >  1:101599‑M1/89‑143 (MQ=255)
                                                  gcaTTCCCAGGCAATGAGTTAACCAAAAAGCGGGGATTTTATCTCCCCGTTAATTTTTCCTCTATTCTCGGCGTTGAATATGGGGGAAACAtcccataagcgctaacttaagggttgtaccatctgaagaatgcgacgcctcg                                                                                        <  2:220682‑M1/142‑53 (MQ=255)
                                                   tgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaaccctgaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCa                                                                                       <  2:183562‑M1/59‑1 (MQ=255)
                                                    aTTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggt                                                                                      <  1:504811‑M1/143‑55 (MQ=255)
                                                     accagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggTAAACATCCCTATACACTTACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATc                                                                                     <  1:136110‑M1/61‑1 (MQ=255)
                                                         cctacAATGAGTTACCCAAAAAGGGGGGATTTTATCTCCCCTTTAATTGTTCCTCTATGCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctc                                                                                 <  2:335699‑M1/141‑60 (MQ=255)
                                                         catttaattattTAACCAAAGAGTGGTTATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgaaccatctgaagattgcgacgcctcggtgcctc                                                                                 <  2:131220‑M1/138‑60 (MQ=255)
                                                         cATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctc                                                                                 <  2:391117‑M1/143‑60 (MQ=255)
                                                          aTACAATTAGTTAACCAAAACTGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTCGGGGCAACAtcccataagcgctaacttaacgattgaaccatctgaagaatgcgacgccccggtgcctcg                                                                                >  2:407374‑M1/1‑83 (MQ=255)
                                                           tACTATTATTTAACCAAAAAGGGGGGATTTTATCCCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGCGAAACAtcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgt                                                                               <  1:49038‑M1/143‑62 (MQ=255)
                                                           tACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGCGGGAAACAtcccctaagcgctcacttaaggggtgaaccacctgcataatccgacaactcgatgcctcgt                                                                               >  2:668702‑M1/1‑82 (MQ=255)
                                                           tACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTATCGGCGTTGAGTGTGGGGGAAACAtcccataagcgctaacttaagggttgaaccctctgaagcatgggacgccgcggtgcccgct                                                                               >  1:7764‑M1/1‑82 (MQ=255)
                                                             tcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATGAcc                                                                             <  1:6812‑M1/69‑1 (MQ=255)
                                                              aaTTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaa                                                                            <  1:397475‑M1/143‑65 (MQ=255)
                                                              aaTTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTCGGGGAAACAtcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctagttaa                                                                            >  2:42517‑M1/1‑79 (MQ=255)
                                                                  agagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCg                                                                        >  1:56518‑M1/70‑143 (MQ=255)
                                                                    agtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGa                                                                      <  2:427439‑M1/76‑1 (MQ=255)
                                                                     gtaattcatcggcacgttaaactatatcaggcgtaataccacaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGaa                                                                     >  1:508283‑M1/67‑143 (MQ=255)
                                                                      aaCCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttacgacgatgc                                                                    >  1:588496‑M1/1‑71 (MQ=255)
                                                                           catcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTaaa                                                               >  1:508803‑M1/61‑143 (MQ=255)
                                                                           cagcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTaaa                                                               >  1:622992‑M1/61‑143 (MQ=255)
                                                                              aGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgtt                                                            <  1:404844‑M1/143‑81 (MQ=255)
                                                                                 ggggATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttctt                                                         >  2:655210‑M1/1‑60 (MQ=255)
                                                                                     aTTTTACCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaat                                                     <  1:298903‑M1/143‑88 (MQ=255)
                                                                                      gtttaTCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaatt                                                    <  1:470259‑M1/142‑89 (MQ=255)
                                                                                          tcatatcaggcgtaataccacaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGGGTGACGCACAGACGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGctct                                                <  1:724237‑M1/98‑1 (MQ=255)
                                                                                          aTCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgt                                                <  2:591513‑M1/143‑93 (MQ=255)
                                                                                              gccctTGACTTTTTCCTCTATTCTCGGCGTGGAATGTGGGGGAACCAtcccagaagcgctaactgaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctctcgttcttcaattgcgttttg                                            <  2:721536‑M1/142‑97 (MQ=255)
                                                                                              ccccTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtccaataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgagttcttcaattgcgttttt                                            >  1:589292‑M1/1‑47 (MQ=255)
                                                                                                 cTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtag                                         <  1:591661‑M1/143‑100 (MQ=255)
                                                                                                   gcgtaataccacaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCGCTATGAAtccg                                       <  2:490631‑M1/107‑2 (MQ=255)
                                                                                                     taagtgccacgacccttaggttagcgcttatgggGAAACACCCCCATATCCTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGa                                     >  1:720067‑M1/35‑143 (MQ=255)
                                                                                                     aaTTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctg                                     <  1:571311‑M1/143‑104 (MQ=255)
                                                                                                        ttttCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctgtca                                  >  1:460232‑M1/1‑37 (MQ=255)
                                                                                                           ccacagcccttatgttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTc                               >  2:35175‑M1/29‑143 (MQ=255)
                                                                                                             ctctATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctgtcagggat                             >  2:171678‑M1/1‑32 (MQ=255)
                                                                                                             ctctATTCTCAGCGTTGAATGTGGGGGAAACAtcccataagcgctaactcaagggttgaaccatctgcagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaagtgcgcgtggtaggctgtcagggca                             >  2:18799‑M1/1‑32 (MQ=255)
                                                                                                             acaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCATGAAGCACAGTCGTGTCCACTGATTACCTGGCGGAACTTAACCTCAGAGAGAGCTCTAGGAATCCTGAgcgttgta                             <  2:52194‑M1/117‑4 (MQ=255)
                                                                                                                   tctcGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctgtcagggatactgtc                       <  1:155598‑M1/143‑118 (MQ=255)
                                                                                                                    ttaaggtagcgctgatgggGAAACCTCCACATAGACTGACGTACATGTTCATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCTGAACGCAt                      >  1:181016‑M1/20‑143 (MQ=255)
                                                                                                                    ctcGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctgtcagggatactgtcc                      >  1:601798‑M1/1‑25 (MQ=255)
                                                                                                                        gttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCTGAACGCATTGaa                  <  1:662398‑M1/128‑1 (MQ=255)
                                                                                                                            tGAATGCGGGGGAAAGTtcccatacgcgctaacttaagggttgaaccagctgaagaatgcgacgcctcggtgcctcgttaagacgatccctcgcgttcttcaattgcgttttgtaggctgtcagggatactgtcccacgaatg              <  2:234377‑M1/143‑127 (MQ=255)
                                                                                                                               cttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCTGAACGCATTGAAATCCCCg           >  1:443441‑M1/9‑143 (MQ=255)
                                                                                                                                 tatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAGATTAAACTAAGGGAGTGCTCTCTGGTTCCTGAGCGTTCTGAACGCATTGAAATCCCCgtg         <  1:5140‑M1/137‑2 (MQ=255)
                                                                                                                                   gggggAAACAtcccataagcgctaacttaagggttgaaccatctgcagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgatttgtaggctgtcagggacactgtcccaccaatgtcatact       >  2:625315‑M1/1‑10 (MQ=255)
                                                                                                                                    ggggAAACAtcccataagcgctaacttaagggttgagccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctgtcagggatactgtcccacgaatggccacctg      <  2:438363‑M1/143‑135 (MQ=255)
                                                                                                                                     gggAAACAtcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagccgatgcctcgcgttcttcaattgcgttttgtaggctgtcagggatactgtcccacgcgtggccacctgt     >  2:646400‑M1/1‑8 (MQ=255)
                                                                                                                                     ggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTCCCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGACCGTTCTGAACGCATTGCAATCCCCGTATTGc     <  2:499510‑M1/141‑1 (MQ=255)
                                                                                                                                        aaaCAtcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgccgggttaacatgttgcctcgcgttcttcaattgcgtattttaggctgtcaggtatactgtcccacggttgtccaccttttcg  >  2:549166‑M1/1‑5 (MQ=255)
                                                                                                                                        aaaCAtcccataagcgctaacttaagggtggaaccatcggaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctgtcagggatactgtcccacgaatggccacctgtaag  <  2:563036‑M1/143‑139 (MQ=255)
                                                                                                                                            |                                                                                                                                          
GCTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCTGAACGCATTGAAATCCCCGTATTGCCGC  >  NC_000913/458655‑458933

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.