| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 458,790 | IS186 (–) +6 bp :: Δ1 bp | intergenic (+90/‑93) | clpX → / → lon | ATPase and specificity subunit of ClpX‑ClpP ATP‑dependent serine protease/DNA‑binding ATP‑dependent protease La |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 458790 = | 0 (0.000) | 32 (0.810) | 29/278 | 0.4 | 100% | intergenic (+90/‑98) | clpX/lon | ATPase and specificity subunit of ClpX‑ClpP ATP‑dependent serine protease/DNA‑binding ATP‑dependent protease La |
| ? | NC_000913 | 608008 = | NA (NA) | noncoding (2/1345 nt) | IS186 | repeat region | |||||
| * | ? | NC_000913 | = 458795 | 0 (0.000) | 47 (1.190) | 40/276 | 0.1 | 100% | intergenic (+95/‑93) | clpX/lon | ATPase and specificity subunit of ClpX‑ClpP ATP‑dependent serine protease/DNA‑binding ATP‑dependent protease La |
| ? | NC_000913 | = 609351 | NA (NA) | noncoding (1345/1345 nt) | IS186 | repeat region | |||||
AGTGCTGTGTTTAACGGTGCTGGGATTTACGCTTCTGGTCGGAGACTCGCTGTGTGAGTTTACGGTGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTT > NC_000913/607868‑608134 | agggCTGTGTTTACCGGTGCTGGGATTAACGCCTCTGGTCGGAGACGCGGTGTGGGAGTTTACGGTGAAGCAACGTAAGATTGAGTTTAAGGCTGTTCGCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATccc < 2:433696/140‑1 (MQ=255) cTGTGTTTAACGGTGCTGGGATTTACGCTTCTGGTCGGAGACTCGCTGTGTGAGTTTACGGTGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATaa < 2:650454/143‑1 (MQ=255) cTGTGTTTAACGGTGCTGGGATCTACGCTTCTGGTCGGAGACTCGCTGTGTGAGTTTACGGTGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATaa < 2:582338/143‑1 (MQ=255) ccaCGGCGCTGGGATTTCCGCTTGTGGTCGGTGTCTTGCTGTGTGAGTTTACGGTGAAGGAACGTAAGATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTaa < 2:184288/141‑1 (MQ=255) gTGCTGGGATTTACGCGTCTGGGCGGAGACTCGCTGTGTGAGTTTACGGTGAAGGATCGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTaa < 2:373147/143‑1 (MQ=255) tGCTGGGATTTACGCTTCTGGTCGGAGACTCGCTGTGTGAGTTTACGGTGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAg > 1:443103/1‑143 (MQ=255) agttACGGTTCTGGTCGGAGATTCGCTGTGTGAGTTGACGGTGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTtgtg < 2:238289/141‑1 (MQ=255) gCTTCTGGTCGGAGACTCGCTGTGTGAGTTTACGGTGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCGCATAAGCGCTAAGTTAAGGGATGTGGTATTa > 1:337023/1‑143 (MQ=255) ttCTGGTCGGAGACTCGCTGTGTGAGTTTACGGTGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTCACTTAAGGGTTGTGGTATTACg > 2:299664/1‑143 (MQ=255) ggtGGGCGGAGACTCGCTGTGTGAGTTTACGGTGACGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAACAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGc < 1:277714/141‑1 (MQ=255) cTGGTCGGAGACTCGCTGTGTGAGTTTACGGTGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGcc > 1:429152/1‑143 (MQ=255) tGGTCGGAGACTCGCTGTGTGAGTTTACGGTGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCt < 1:605331/143‑1 (MQ=255) ggggggAGGCGCGCGGTGGGAGTTTGCGGTGAAGGAATGTAAGATTGAGTTTAAGGCTGTGCTCGCTTACGAACCGAAGAAGTAGCCGTGGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTg < 2:283319/139‑1 (MQ=37) ccTCGCTGTGTGAGTTAACGGTGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGAtt < 1:450570/142‑1 (MQ=255) tttACGGTGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGATTACGAACCGAAGAAGTAGCCGTTGTGCGGGGCGTAACCCCATAAGAGCTAACTGCGGGGTTGTGGTATTACGCCTGATCTGATTTACCGTACCGATGa > 2:672015/1‑143 (MQ=37) gttACGGTGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGa < 1:545156/142‑1 (MQ=255) tgaCGGTGAAGGAACGTAAGATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGaa < 2:35587/141‑1 (MQ=255) ggTGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGAGTTAACGTGCCGAGGAAttcc > 2:585010/1‑141 (MQ=255) gggAAGGAACGTAAGATTGAGTTTAAGGCTGTGCGCGCTTACGAACCGAAGAAGTAGCCGGTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACCCCTGATATGATTTAACGTGCCGATGAATTAct < 2:20392/141‑1 (MQ=25) tGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGATGTGGTGTTACGCCGGCTATGATTTAACGTGCCGAGGAAGGActc > 2:626518/1‑143 (MQ=37) ggAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCAc < 2:367065/143‑1 (MQ=255) gAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGGAGCCGTTGTGCGGGGCGTAGTCCCATAAGCGCTAACTTAAGGGGTGTGGGAGTGCGCCTGCTAGGGTGTGACGTGCCGATGAATTCCgctccgg > 2:653939/1‑140 (MQ=25) ttGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGTGGGGAGTAATCCCATACGCGCTCACTTAAGGGTTGTGGTATTACGCCTCATATGCTTTAACGTGCCCATGACTTACTCTCACGATAACTGGTc > 2:79316/1‑143 (MQ=25) gAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGANGTAGCCGTAGTGCGGGGCGTAATCCCATAAGGNCTAACTGAAGGGATGTGGGATTACGCCTGNAATGATTCAACGTGCCGATGAATTACTCACAAGATAACTGATCAg > 2:451405/1‑143 (MQ=255) tttAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCaa > 1:645039/1‑143 (MQ=255) ggCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTCACTTAAGGGTTGTGGTGTTACGCCTGATATGGTTTAACGTGCCGCTGTATTAGTCGCACGATAGCTTGTCGGCAATCCtc > 1:86295/1‑142 (MQ=255) ttgtctgcGCTTACGATCCGAAGACGTAGCCGTTGTGCGGGGAGTAAGCCCATAAGCGCTAACTTAAGGGTTGCGGTATTACGCCTCATATGATTTAACGTGCCGATGAATTACTCTCACGCTAACTGGTCAGCAATTCTGGc < 2:197890/136‑1 (MQ=17) cTGTTCTCGCTGACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATAACTCTCACGATAACTGGTCAGCAATTCTGGc < 2:195215/143‑1 (MQ=255) cGAAGAGGTAGCCGTGGTGCGGGGAGTAATCCCATAAGCGCTGACTTAAGGGTGG‑GGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCgaa < 1:199128/143‑1 (MQ=14) gaagaaGGAGCCGTGGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCgaa < 2:658477/143‑1 (MQ=255) caagtagTAGCCGTTGTGAGGGGAGTAATCCCATAAGCGCTAACTTATGGGTTGTGGTATTTCGCCTGATATGATTTAACGTGCCGATGAATTACGCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCgaa < 2:11426/142‑1 (MQ=14) agTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACt < 2:442311/143‑1 (MQ=255) tAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTCAGCCCGCAGAACTgg > 1:593417/1‑143 (MQ=255) aGCCGTTGTTCGGGGAGTAATCCCATAAGCGCTTGAGCAAGTGTTGTAGTATTACGCTTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGa < 2:512687/143‑1 (MQ=14) gCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAAATGGTCAGCAATTCTGGCCCATATTGGTAAGGCCGAAGAACTGGAt > 2:409258/1‑143 (MQ=255) ttGTGCGGGGAGTAATCCCATAAGCGCTAAATTAAGCGATGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGCTAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAACAACTGGATACtt > 2:599323/1‑143 (MQ=14) | AGTGCTGTGTTTAACGGTGCTGGGATTTACGCTTCTGGTCGGAGACTCGCTGTGTGAGTTTACGGTGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTT > NC_000913/607868‑608134 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |