| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 458,790 | IS186 (–) +6 bp :: Δ1 bp | intergenic (+90/‑93) | clpX → / → lon | ATPase and specificity subunit of ClpX‑ClpP ATP‑dependent serine protease/DNA‑binding ATP‑dependent protease La |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 458790 = | 0 (0.000) | 30 (1.140) | 28/278 | 0.1 | 100% | intergenic (+90/‑98) | clpX/lon | ATPase and specificity subunit of ClpX‑ClpP ATP‑dependent serine protease/DNA‑binding ATP‑dependent protease La |
| ? | NC_000913 | 608008 = | NA (NA) | noncoding (2/1345 nt) | IS186 | repeat region | |||||
| * | ? | NC_000913 | = 458795 | 0 (0.000) | 26 (1.000) | 25/276 | 0.1 | 100% | intergenic (+95/‑93) | clpX/lon | ATPase and specificity subunit of ClpX‑ClpP ATP‑dependent serine protease/DNA‑binding ATP‑dependent protease La |
| ? | NC_000913 | = 609351 | NA (NA) | noncoding (1345/1345 nt) | IS186 | repeat region | |||||
CGTTGCTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCTGAACGCATTGAAATCCCCGTATTG > NC_000913/458651‑458929 | cattacgtgccgaagtatccagttcttcgggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGaaa > 2:376111‑M1/140‑143 (MQ=255) aTGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACTATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagc < 1:442470‑M1/143‑11 (MQ=255) gtatccagttcttcgggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaatacaacaacccttaagttagcgcttatgggGAAACATCCCCATATACt < 2:392289‑M1/18‑1 (MQ=255) gCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataaacgct > 1:80243‑M1/1‑130 (MQ=255) cAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCATTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgcta > 1:393853‑M1/1‑129 (MQ=255) tccagttcttcgggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGAAACATCCCCATATACTGAc < 2:345200‑M1/21‑1 (MQ=255) tccagttcttcgggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGAAACATCCCCATATACTGAc > 1:416193‑M1/123‑143 (MQ=255) ttcttcgggcttaccaatatgagccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtacatcgacgtctgttaagtgagcgattatggcGAAACATCACCATATACTGACgtatc < 2:78562‑M1/26‑3 (MQ=255) tcttcgggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACAt > 1:345200‑M1/117‑143 (MQ=255) tcttcgggcttaccaatacgggccagaatggctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACAt > 1:414190‑M1/117‑143 (MQ=255) gAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaag < 1:238711‑M1/143‑22 (MQ=255) aGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTACTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagagctaacttaaggg > 2:184516‑M1/1‑120 (MQ=255) ggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAAt > 1:283734‑M1/111‑143 (MQ=255) cAACAGGCATCTGGTGAATAATTAACCATTCCAATACAATTAGGTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttga < 1:124864‑M1/143‑28 (MQ=255) gcttacgaatgtcgtccagaattgctgcccagttatcgtgagagtaattcatcggcccgttaaatcatttcaggcgtaataccacaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATa > 2:93215‑M1/110‑143 (MQ=255) caatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGGAACATCCCCATATACTGACGTACATGTTAATAGATGGc < 1:42285‑M1/40‑1 (MQ=255) caatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGCTGGc < 2:303363‑M1/40‑1 (MQ=255) cATCTGGTGAATAATTAACCATTCCAATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgaaccatct < 1:336134‑M1/143‑35 (MQ=255) cTGGAGAATAATTAACCATTACCATACAAAAAAAAAAAAAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgaaccatctgaa < 2:39906‑M1/143‑38 (MQ=255) gggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAg < 2:474962‑M1/46‑1 (MQ=255) aataatTAACCATTCCCATACAATTAGTCAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGACACAtcccataagcgctaacttaagggttgaaccatctgaagaatgc < 1:293102‑M1/143‑44 (MQ=255) aatTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgaaccatctgaagaatgcgac > 1:419611‑M1/1‑97 (MQ=255) ttAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgc < 1:175341‑M1/143‑49 (MQ=255) ttgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGAAACATCCCCACATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCgt > 1:277456‑M1/89‑143 (MQ=255) tgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATCGATGGCGTGAAGCACAGCCGTCTCa < 1:277044‑M1/59‑1 (MQ=255) aTTCCCATACCATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggt < 1:89502‑M1/143‑55 (MQ=255) aTTACCATACAATTAGTTATCCAAAAAGGGGGGATTGTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggt < 2:322463‑M1/143‑55 (MQ=255) ctattAGTTAACCAAAAAGGGGGGATTTTATCGCCCCTTTAATTGTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgtta < 1:137275‑M1/141‑64 (MQ=255) aaTTAGTTAACCAAAAAGGGGGGCTTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctgactttagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaa > 1:110065‑M1/1‑79 (MQ=255) taattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGaaa > 1:392289‑M1/66‑143 (MQ=255) attcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGAAACATCCCCATATACTGCCGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAAtt < 1:147681‑M1/80‑1 (MQ=255) cAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctc > 2:362678‑M1/1‑68 (MQ=255) catcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTaaa > 1:170034‑M1/61‑143 (MQ=255) agagtggggcttttCTCTCCCCTTGAATTTTTCCTCTCTTCTCTGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcg < 2:277222‑M1/138‑79 (MQ=255) cacgttaagtgctatcagtcgtaataccacaagacttaagttagcgcttatgggGAAACATGCCCATATGCTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAaga > 2:64043‑M1/55‑143 (MQ=255) gggATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtccctcgttaagacgatgcctcgcgttcttc > 1:80138‑M1/1‑59 (MQ=255) cgttaaatcataccaggcgtaataccaccacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAagaga > 1:366266‑M1/53‑143 (MQ=255) gttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACtaagaggg < 1:82760‑M1/92‑3 (MQ=255) tttATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattg < 1:325591‑M1/143‑90 (MQ=255) tcatatcaggcgtaataccacaacccttaagttagcgcttatgagGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGctct > 1:129138‑M1/46‑143 (MQ=255) aTCTCCGCTTTAATTTGTCCTCTAGTCGCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgt < 1:418250‑M1/143‑93 (MQ=255) ccccTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaaattaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgctgcctcgcgctcttcaattgcgtattg > 1:408988‑M1/1‑47 (MQ=255) taataccacaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAg < 1:343381‑M1/110‑1 (MQ=255) aataccacaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGTTGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGc > 1:471366‑M1/33‑143 (MQ=255) cacaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCt < 2:172786‑M1/116‑1 (MQ=255) aacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCTGaa > 1:452366‑M1/25‑143 (MQ=255) tctcGGCGTCGAGTGTGGGGGCAACAtcccatacgcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctgtcagggatactgtc < 2:163524‑M1/143‑118 (MQ=255) gttagctcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCTGAACGCATTGaa > 1:474962‑M1/16‑143 (MQ=255) agcgcttatgggGAACCATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTGATCTGGTGATATGACGGGAAGGAAGCTAAGAGAGAGCTCTATGAATCCTGAGCGTTCTGAACGCATTGAAATc > 2:344440‑M1/13‑143 (MQ=255) tGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgagttttgtaggctgtcagggatactgtcccacgaatg > 2:28895‑M1/1‑17 (MQ=255) gAATGTGGGGGAAACAtcccataagcgctaacttaagggttgaacaatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttattcaattgcgttttgtaggctgtgagggatactgtgcaacggctgg > 2:294020‑M1/1‑16 (MQ=255) gcttatgggTAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCTGAACGCATTGAAATcccc > 2:399213‑M1/10‑143 (MQ=255) cttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCTGAACGCATTGAAATCCCCg > 1:400728‑M1/9‑143 (MQ=255) atgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCGTCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCTGAACGCGTTGAAATCCCCGTAt < 2:399260‑M1/138‑1 (MQ=255) ggggAAACAtcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggttgtcagggatactgtcccacgaatggccacctg > 1:440488‑M1/1‑9 (MQ=255) | CGTTGCTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCTGAACGCATTGAAATCCCCGTATTG > NC_000913/458651‑458929 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |