| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 458,790 | IS186 (–) +6 bp :: Δ1 bp | intergenic (+90/‑93) | clpX → / → lon | ATPase and specificity subunit of ClpX‑ClpP ATP‑dependent serine protease/DNA‑binding ATP‑dependent protease La |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 458790 = | 0 (0.000) | 33 (0.880) | 30/278 | 0.2 | 100% | intergenic (+90/‑98) | clpX/lon | ATPase and specificity subunit of ClpX‑ClpP ATP‑dependent serine protease/DNA‑binding ATP‑dependent protease La |
| ? | NC_000913 | 608008 = | NA (NA) | noncoding (2/1345 nt) | IS186 | repeat region | |||||
| * | ? | NC_000913 | = 458795 | 1 (0.030) | 31 (0.830) | 28/276 | 0.3 | 96.7% | intergenic (+95/‑93) | clpX/lon | ATPase and specificity subunit of ClpX‑ClpP ATP‑dependent serine protease/DNA‑binding ATP‑dependent protease La |
| ? | NC_000913 | = 609351 | NA (NA) | noncoding (1345/1345 nt) | IS186 | repeat region | |||||
CTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtccc‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/458656‑458795‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGGGATACTGTCCCACGAATGGCCACCTGTAAGCTCCAGA < NC_000913/609351‑609207 CTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAACAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTCTTCCCGCCGTTGAATGTGCGGGAAACATaa > 1:637916/1‑141 tccTGGCAAGGCGGATGCGCAACAGGCATCTGGTGCATAATTAACCATTCCCATACAATTAGTTATCCAAAAAGGGTGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCATAA < 2:200981/140‑1 AGCCGGAAGCGCAACAGGTATCTTGTAAATAATCAACCATGCCCATACAATTAGTTAACCAAAAAGGGGCGATTTTATCTCCCCTTTAATCTGTCCTCCATTCTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAAC < 2:715400/143‑1 CCGGAAGCGCAACAGGCAGCTGGTGAAGAATTAGCCATTTCCATACGATTAGTTAACCAAAAAGGGGGGATTTTATCTCACCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTT < 2:525354/143‑1 aAAGAGCAACAGGCATCTGGTGAATAAATAACCATACCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAG < 1:434623/142‑1 GAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAG > 1:459912/1‑143 GAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCCTTGAATGTGGGCGAAACATCCCATAAGCGCTAACTCAAG > 2:258859/1‑143 AAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTACTCTATTCTCGGAGTTGAATGTGGGGGAAACATACCATAAGCGCTAACTAAAGG > 1:399838/1‑143 ttAGGCATTTGGTAAATGATGGACGATTCCCATATTTTTTGTTAACCAAAAAGGGGGGATTTTATCACCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCATAAGTGCTAACTTAAGGGTTGAAC < 2:97017/141‑1 TAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGTGATTTTATCTCCCCTTTAATTTTTCCTCTATTCGCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAACGCGA < 1:358120/143‑1 TTCCCTTACAAGCTGTTAACCAGAAAGGGGGGATTTTATCTCCCCTTTAATTTTTTCTCTATTTTCGGCGTTGAATGTGGGGGAAACATCCGAGAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTG < 1:466720/143‑1 ATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCG > 2:313055/1‑143 CAAGTAGTTAGCCAAAAAGTGTGGATTTTATCTCCTCTTTAATTTGTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTA < 2:245306/143‑1 TTAACCAAATATGGGGGATTTTATCCCCCCTTTAATTTCTGCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGAT < 2:637916/143‑1 TTAACCAAAAATGGTGGATTTTATCTCCCCTTTAATTTTTCCTCTAGTCGCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGAT < 1:292180/143‑1 GGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTC < 2:459912/143‑1 GGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTACT > 2:720703/1‑143 TATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCG < 1:621646/143‑1 TATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACAATCTGAAGAATACGACGCCTCGATGCCTAGTTAAAAAGATGCCTCGCGTTCTTCAATTGCG > 2:190768/1‑143 CCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTA < 1:313055/143‑1 CTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAG < 1:431394/143‑1 tgTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGG < 2:458678/141‑1 TTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAGCCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGAGATTTGTAGGATGTC > 1:636496/1‑143 TTTTCCTCTAGTCTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTTAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCA < 2:61914/143‑1 TTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCTTCGTTAAGACGATGACTCGAATACTTCAATAGCGTTTTGTAGGCGGTCAG > 1:538138/1‑143 CCTCTTTTCTCGGCGTTTAATGTGGGGTATACATTCCATAAGCGCTAACTGAAGGGTTGAACCAACTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGGGA < 1:6904/143‑1 TCTCGGTGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGGGATACTGTC < 1:681953/143‑1 CTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGGTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGGGATACTGTCC < 1:487037/143‑1 gggtGTTGAATGTGGGGGAAACATGCCATAAGCGCTCACTTAAGGGTTGAACCAGCTGAAGCATGCGGCGCCTGGGTGACTCGTTAAGACGATGCCTCGCGTTCTTCAATTTTGGTTTGTAGGCTGTCAGGGATACTGTCCCA < 2:215748/139‑1 TTGAATGTGGGGGAAACCTCCCATAAGCCCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGTGATACTGTCCCACGAAT < 2:652171/143‑1 GGGGGAAAGATCTGATAAGCGCTAAGCTAATGGTTGAACCGTCTGAGGAGTGCGACGCCTCGGTTCGTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGGAGGCTGTCAGGGATACTGTCCCACGAATGGCCACCT < 2:7366/143‑1 ATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGGGATACTGTCCCACGAATGGCCCCCTGTAAGCTCC > 2:681242/1‑143 ggCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGATAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGGGATACTGTCCCACGAATGGCCACCTGTAAGCaaca > 2:557167/3‑139 TCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTCGGCTGTCCGGGTTACTGTCCCACGCATGGCAAACTGTAAGCTCCA > 1:241736/1‑143 TCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGGGATACTGTCCCACGAATGGCCACCTGTAAGCTCCA < 2:119802/143‑1 TCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGCGATACTGTCCCACGAATGGCCCCCTGTAAGCCCCA > 2:660619/1‑143 CCATAAGTGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGGGATACTGTCTAACGAATGGCCAACTATAAGCTCCAGA > 1:511983/1‑143 CCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGCTGCCTCGCGCTCTTCAATTGCGTTTTGTAGTCTGTAAGGGATACTATCCCACGAATGGCCATATGTAACGTCCAGc > 1:106323/1‑142 CCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGGGATCCTGTCCCGCGCCTGGCCTCCTGTATGCTCCcgc > 1:309775/1‑140 CCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTACTGTTTGTTGTCAGGGCTACTGTCCCGCGAATGGCCACCTGTAAGCTCCAaa > 1:528848/1‑141 CTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtccc‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/458656‑458795‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGGGATACTGTCCCACGAATGGCCACCTGTAAGCTCCAGA < NC_000913/609351‑609207 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |