Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
JC JC	NC_000913	1,259,760	Δ1 bp :: IS186 (–) +5 bp	coding (1040‑1044/1680 nt)	dauA ←	C4‑dicarboxylic acid transporter

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	608007 =	NA (NA)	55 (0.850)	50/276	0.2	100%	noncoding (1/1345 nt)	IS186	repeat region
	?	NC_000913	1259760 =	0 (0.000)					coding (1044/1680 nt)	dauA	C4‑dicarboxylic acid transporter
*	?	NC_000913	= 609350	NA (NA)	34 (0.520)	32/278	1.4	100%	noncoding (1344/1345 nt)	IS186	repeat region
	?	NC_000913	= 1259764	0 (0.000)					coding (1040/1680 nt)	dauA	C4‑dicarboxylic acid transporter

GGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTATCTTT  >  NC_000913/609210‑609492                                                                                                                                             |                                                                                                                                               ggAGCTTACAGGTCGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAg                                                                                                                                              <  2:160029/143‑1 (MQ=11)      ttACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTACTc                                                                                                                                         >  1:258803/1‑143 (MQ=17)         cAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATcccc                                                                                                                                      <  1:948180/143‑1 (MQ=37)           ggTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACTCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGc                                                                                                                                    <  1:679151/143‑1 (MQ=38)           ggTGGCCATTCGTGGGACAGTATCACGGACAGCATACAGAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGc                                                                                                                                    <  2:570442/143‑1 (MQ=255)                ccATTGGTGGGACAGTGTGCCTGACAGCCTACAGAGCGCAAGTGAAGGACGCGAGGCATCGTCTTAACGAGGCACCGTGTCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATc                                                                                                                               <  2:1105447/143‑1 (MQ=14)                  aTTCGTGGGACAGTAACCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCACGCATATCCg                                                                                                                             >  2:917148/1‑143 (MQ=255)                       tGGGACCGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCCAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCCGATGGTTCAACCCTTAAGTTCGCGCTCATGGGAGTACACCCCGCATCTCCGGttct                                                                                                                        >  2:432361/1‑141 (MQ=11)                          gagaGTATACCTGACAGACGACGAAACGCAGTTGAGGATCGCGGGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTAAGATGGTTCACCTCGTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTgtcag                                                                                                                     <  2:210269/140‑1 (MQ=17)                          gACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGACTTAACGAGGCACCGACGCCACGCCTTCTCCAGACGCTTCCACCCTTAAGTTAGCGCCTAAGGGACTAATCCCCACAGAACCggcgccaac                                                                                                                     >  2:241049/1‑136 (MQ=11)                               tATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTgccaggtcag                                                                                                                >  2:707084/1‑143 (MQ=255)                                   ccTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATg                                                                                                            <  2:875656/143‑1 (MQ=255)                                      gACAGGCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTATCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTa                                                                                                         <  2:393077/143‑1 (MQ=255)                                       aCAGCCTACAAAACGCACTCGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTaa                                                                                                        <  1:413211/143‑1 (MQ=255)                                         aGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTCAGTTAGCGCTTATGGGAGTAATCCCCGCACATCCGGTTGTCAGGTCAGGATGGTAAgg                                                                                                      >  2:182028/1‑143 (MQ=255)                                         aGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGAGGGTAggg                                                                                                      >  1:1196503/1‑143 (MQ=255)                                           ccTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATGTCCGGTTGTCAGGTCAGGATGGTAAGGcc                                                                                                    >  1:778874/1‑142 (MQ=255)                                           ccTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCa                                                                                                    >  1:776529/1‑143 (MQ=255)                                           ccTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTCCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGCGTAATCCCCGCACATCCGGTTGTCAGGTCGGGATGGTACGGCa                                                                                                    >  2:495105/1‑143 (MQ=17)                                             tACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCCTATCCGGTTGTCCGGTCAGGATGGTCAGACAcc                                                                                                  >  1:112231/1‑143 (MQ=255)                                                aaagCGCAATTGAAGAACGCGGGGCAGCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGc                                                                                               <  2:340574/143‑1 (MQ=255)                                                    cGCAATTGAAGAACGCGAGGCCTCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCAGGTCGTCAGGGCAGGGTGGTAACGCCCCTGCTTTa                                                                                           >  2:133908/1‑143 (MQ=18)                                                    cGCAATTGAAGAACGCGAGGCAGCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTAAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTa                                                                                           <  2:1105657/143‑1 (MQ=255)                                                     gCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTac                                                                                          <  2:1055522/143‑1 (MQ=255)                                                       aaTTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTacac                                                                                        >  2:29595/1‑143 (MQ=255)                                                         ttGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACtt                                                                                      >  2:619726/1‑143 (MQ=255)                                                           gatggaCGCGAGGCAGCGGCTGAGCGAGGCACCGAGGCGTCGCAGTCTTCAGATGGTTCGACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCTGGTTTTCAGGTCAGTATGGTAAGGCACCTGCTTTACACTTTc                                                                                    <  2:476528/138‑1 (MQ=21)                                                            aagaaCGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCg                                                                                   <  1:670210/143‑1 (MQ=255)                                                            aagaaCGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCg                                                                                   >  1:570725/1‑143 (MQ=255)                                                             agaaCGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCga                                                                                  >  1:174529/1‑142 (MQ=255)                                                             agaaCGCGAGCCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGc                                                                                  <  1:496432/143‑1 (MQ=255)                                                              gaaCGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGcc                                                                                 >  2:714694/1‑143 (MQ=255)                                                              gaaCGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGcc                                                                                 >  1:662358/1‑143 (MQ=255)                                                                  gcgAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTg                                                                             <  2:580864/143‑1 (MQ=255)                                                                  gcgAGGCATCGTCTTAACGAAGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCGTATCCGGTTGTCAGGTCAGGATGGTAAGTCACCTGCTTTACACTTTCGCCCGTg                                                                             >  1:782857/1‑143 (MQ=255)                                                                  ccgATGCATTGTTTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAATGCACCTGCTTTACACTTTCGCCCGtc                                                                             <  2:768393/142‑2 (MQ=255)                                                                   cgAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTCTCGCACGTgg                                                                            >  2:611958/1‑143 (MQ=255)                                                                           cGTCTTAACGAGGCACCGAGGAGACGCATTTATTAGCAGAGCGAGGTCTGTAGGTAGCGCTTATGGGAGTAATACTCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGAt                                                                    <  1:1183799/143‑1 (MQ=255)                                                                            gtattAACGAGTCACCGAGTCGTCGTAGTCGTCAGGTGCGCCAACCCTCAAGTTAGCGCTGATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGGTTTACACTTTCGCCCGTGGTCAGTGATg                                                                   <  2:526242/140‑1 (MQ=255)                                                                            gTCTTAGCGAGGCACCGATGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAAGCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATg                                                                   <  2:229598/143‑1 (MQ=255)                                                                             tCTTAGCGAGCCAGCGAGGGGCCGTATTCTTCAGGTGGTTCATCCCGTATGTTAGCGCTTATGGGAGTAATGCCAGCATATCCGGTTGTCAGGTCAGGATGGTTAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATgg                                                                  <  2:404091/143‑1 (MQ=255)                                                                             tCTTAACGAGGCACCGAGGCGTCGCATTCTTCCGGCGGAGCATCCCGTAAGTGAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCACCCGTGGTCAGTGAtag                                                                  >  2:143905/1‑141 (MQ=37)                                                                              cTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGc                                                                 >  1:151651/1‑143 (MQ=255)                                                                               ttAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCt                                                                >  2:1017386/1‑143 (MQ=255)                                                                                 aaCGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTACGGCACCTGCTTTACACTTTCGCCCGTCGTCAGTGACGGCTGc                                                              >  1:74390/1‑143 (MQ=255)                                                                                    gAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCggg                                                           <  1:938380/143‑1 (MQ=255)                                                                                                 gTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATCGCTGCGGGCGAACCGTACCAg                                              >  1:254440/1‑143 (MQ=255)                                                                                                  tCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGa                                             >  1:783784/1‑143 (MQ=255)                                                                                                    gCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTTCCAGAtg                                           >  2:219167/1‑143 (MQ=255)                                                                                                    gCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGCAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGAtg                                           >  1:844881/1‑143 (MQ=255)                                                                                                      aTTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGACTCGTACCCGAtgtt                                         >  2:313559/1‑143 (MQ=255)                                                                                                        tcttcAGATGGTTCAACCCTTAAGGTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGAtgttgt                                       <  2:996115/143‑1 (MQ=255)                                                                                                         cttcGGATGGTCCAGCCCTTAGGTTAGCGCTTATGCGAGTACTCCCCGCATATCCGGTTGTCGGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTc                                      <  2:823073/143‑1 (MQ=255)                                                                                                         cttcAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTc                                      <  2:620970/143‑1 (MQ=255)                                                                                                          ttcAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCCGGGTCAGTGATGGCTGCGGGCGCATCGTACCCGACGTTGTCa                                     >  2:1047136/1‑143 (MQ=39)                                                                                                           tcAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCaa                                    >  1:81600/1‑143 (MQ=255)                                                                                                             aGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAAtt                                  >  2:914210/1‑143 (MQ=255)                                                                                                                   ttCAACCCTTTAGTCATGGTTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCgt                            <  2:698051/143‑1 (MQ=255)                                                                                                                      aaCCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACCTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGCTGTTGTCAATTAATCGTGtt                         >  1:531121/1‑143 (MQ=255)                                                                                                                      aaCCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGAAAGGCACCTGCTTTGCACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGACGCGTACCAGATGTTGTGACTTAATCGGGtt                         >  2:752134/1‑143 (MQ=255)                                                                                                                           ttAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAAGTAATCGTGTTGGcac                    >  1:736784/1‑143 (MQ=255)                                                                                                                                     gcTTATGGGGGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGa          <  2:1082930/143‑1 (MQ=255)                                                                                                                                             gAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTAtcttt  >  1:185542/1‑143 (MQ=255)                                                                                                                                             gAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAATGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTAtcttt  >  1:1192544/1‑143 (MQ=255)                                                                                                                                             gAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGAGGTCAGTGATGGCTGCGAGCGCATCGTACCAGATGTTGTCAGTGACTCGGATTAGCACAGCGACATGACAAtctta  >  2:621221/1‑142 (MQ=255)                                                                                                                                             |                                                                                                                                               GGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTATCTTT  >  NC_000913/609210‑609492

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.