| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 3,553,103 | IS5 (+) +4 bp | coding (19‑22/2706 nt) | malT → | mal regulon transcriptional activator |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2288919 = | NA (NA) | 47 (0.960) | 36/282 | 0.3 | 95.8% | noncoding (1195/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | 3553103 = | 2 (0.040) | coding (19/2706 nt) | malT | mal regulon transcriptional activator | |||||
| * | ? | NC_000913 | = 2290113 | NA (NA) | 69 (1.420) | 41/280 | 0.2 | 98.5% | noncoding (1/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | = 3553106 | 1 (0.020) | coding (22/2706 nt) | malT | mal regulon transcriptional activator | |||||
CCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2289049‑2288919‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTAAGTCGTCCGGTTCGACTCGACCATACCGTGGTTCGTGAGCGCCTGCTGGCTAAACTTTCCGGCGCGAACAACTTCCGGCTGGCGCTGATCACGAGTCCTGCGGGCTACGGAAAGACCACCCTCATTTCCCAGTGGGCGG > NC_000913/3553103‑3553244 CCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAGTCGTCCG > 1:722626/1‑143 TTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAGTCGTCCGGT > 1:20266/1‑143 TAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAACTTCCCCGCTTATTCGCACCTTCCCTGAGTCGaaccgga < 1:620135/143‑8 AATGACGAAGCAACGGTCTAAATAGGCTGATTCAAGGCACCTACGGGAGAAAAAAGCGGCTCAAACATGCCGAAATGAAATGACTGAGCCAGCCGAGAAGAATTTTCCCGCTTATTCGCACCTTCCCTAAGTCGTCCGGTTCG < 1:815993/143‑1 TGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCGCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCGCGCTTATTCGCACCTTCCCTAAGTCGTCCGGTTCGAC > 1:793119/1‑143 GGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAGTCGTCCGGTTCGACT < 1:351136/143‑1 GAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAGTCGTCCGGTTCGACTCGA < 1:459269/143‑1 GAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAGTCGTCCGGTTCGACTCGACCA < 2:567371/143‑1 AACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAGTCGTCCGGTTCGACTCGACCATA > 1:437553/1‑143 TCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAGTCGTCCGGTTCGACTCGACCATACCGTG < 1:473314/143‑1 AAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAGTCGTCCGGTTCGACTCGACCATACCGGGGTT > 1:6881/1‑143 AATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAGTCGTCCGGTTCGACTCGACCATACCGTGGTTC < 1:410853/143‑1 GCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAGTCGTCCGGTTCGACTCGCCCATCCCGTGGTTCGcggg > 1:394580/1‑139 GCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAGTCGTCCGGTTCGACTCGCCCATACCGTCGTTCGTGAG > 1:765959/1‑143 AAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGGAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTACCTAAGTCGTCCGGTGCGACTCGACCATACCGTGGTTCGCGACCGCCTGCg > 2:433799/1‑142 AAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAGTCGTCCGGTTCGACTCGACCATACCGTGGTTCGTGCGCGCCTGCT > 1:44755/1‑143 AAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTAGCACCTTCCCTAAGTCGTCCGGTTCGACTAGACCATACCGTGGTTCGTGAGCGACTGCT > 2:66887/1‑143 GGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAGTCGTCCGGTTCGACTCGACCATACCGTGGTTCGTGAGCGCCTGCTGG < 2:453725/143‑1 GGCAGTTAGGGGACAAAAGATCGGCGCAAACATGAAGAGAGGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAGTCGTCCGGTTCGACTCGACCAGACCGTGGTTCGTGAGCGCCTGCTGG < 2:613624/143‑1 TTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGACTTTCCCCGCTTATTCGCACCTTCCCTAAGTCGTCCGCTTCGACTCGACCATCCCCGCGTTCGTGAGCGCGCGCTGGCTAA > 2:872533/1‑143 GGGAGAAACAGTCGGCGCACACATGAAGAAAGGAAATGGCTGAGTCAGCCGAGAAGATTTTCCCCGCTTATTCGCACCTCCCCTAAGTCGTCCGGTTCGACTCGACCATACCGTGGTTCGTGAGCGCCTGCTGGCTAACCTTT < 1:134798/143‑1 AGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTCTTCGCACCTTCCCTAAGTCGTCCGGTTCGACTCGACCATACCGTGGTTCGTGAGCGCCTGCTGGCTAAACTTTCCG > 2:152492/1‑143 GCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAGTCGTCCGGTTCGACTCGACCATACCGTGGTTCGTGAGCGCCTGCTGGCTAAACTTTCCGGCGCGAACAAC > 1:492146/1‑143 TCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAGTCGTCCGGTTCGACTCGACCATACCGTGGTTCGTGAGCGCCTGCTGGCTAAACTTTCCGGCGCGAACAGCTT > 1:749340/1‑143 TCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAGTCGTCCGGTTCGACTCGACCATACCGTGGTTCGTGAGCGCCTGCTGGCTAAACTTTCCGGCGCGAACAAata > 2:384333/1‑140 CAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAGTCGTCCGGTTCGACTCGACCATACCGTGGTTCGTGAGCGCCTGCTGGCTAAACTTTCCGGCGCGGCCAACTTC > 1:111950/1‑143 CAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAGTCGTCCGGTTCGACTCGACCATACCGTGGTTCGTGAGCGCCTGCTGGCTAAACTTTCCGGCGCGAACAACTTC > 2:177743/1‑143 ATGAAGAAATGAAATGACTGAGTCAGCCGACCAGAATTACCCCGCTTATTCGCACCTTCCCTAAGTCGTCCGGTTCGACTCGACCATACCGTGGTTCGTGAGCGCCTGCTGGCTAAGCTTTCCGGCGCGGACGACTTCCGGCg > 1:698730/1‑142 AAATGACTGAGTCAGCCGAGAAGAATTGCCCCGCTTATTCGCACCTTCCCTAAGTCGTCCGGTTCGACTCGACCATACCGTGGTGCGTGAGCGCCTGCTGGCTAAACTTTCCGGCGCGAACAACTTCCGGCTGGCGCTGATCA < 1:522226/143‑1 TGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAGTCGTCCGGTTCGACTCGACCATACCGTGGTTCGTGAGCGCCTGCTGGCTAAACTTTCCGGCGCGAACAACTTCCGGCTGGCGCTGATCACGA < 2:20266/143‑1 TGACTGAGGCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAGTCGTCCGGTTCGACTCGACCATACCGTGGTTCGTGAGCGCCTGCTGGCTAAACTTTCCGGCGCGAACAACTTCCGGCTGGCGCTGATCACGA < 1:618735/143‑1 ACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAGTCGTCCGGTTCGACTCGACCATACCGTGGTTCGTGAGCGCCTGCTGGCTAAACTTTCCGGCGCGAACAACTTCCGGCTGGCGCTGATCACGAGT < 2:646886/143‑1 CTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAGTCGTCCGGTTCGACTCGACCATACCGTGGTTCGTGAGCGCCTGCTGGCTACACTTTCCGGCGCGAACAACTTCCGGCTGGCGCTGATCcagaggc > 1:819663/1‑136 tAGAAGTATTGCCTTGCTTATTCGTATCTTCCCTAAGTCGTACGGTTCGACTCGA‑CATACCGTGGTTCGTGAGCGCCTGCTTGCTAAACTTTCCGGCGTGAACAACTTCCGGCTGGCGCTGATCACGAGTCCTGCGGGCTACG < 2:224015/142‑1 AAGAATTTCCCCGCTTATTCGCACCTTCCCTAAGTCGTCCGGTTCGACTCGACCATACCGTGGTTCGTGAGCGCCTGCTGGCTACACTTTCCGGCGCGCACAACTTCCGGCTGGCGCTGATCACGAGTCCTGCCGCCTACGGA > 2:208265/1‑143 AAGAATTTCCCCGCTTATTCGCACCTTCCCTAAGTCGTCCGGTTCGACTCGACCATACCGTGGTTCGTGAGCGCCTGCTGGCTAAACTTTCCGGCGCGAACAACTTCCGGCTGGCGCTGATCACGAGTCCTGCGGGCTACGGA > 1:391694/1‑143 tatgTCCCCGCTTCTTCGCCCCTGCCCCAAGTCGTCCGGTTCTACTCGACCATCCCGTGGTTCGTGAGCGCCTGCTGGCTAAACTTTCCGGCGCGAACAACTTCCGGCTGGCGCTGATCACGAGTCCTGCGGGCTACGGAAAG < 2:873866/139‑1 AATTTCCCCGCTTATTCGCACCTTCCCTAAGTCGTCCGGTTCGACTCGACCATACCGTGGTTCGTGAGCGCCTGCTGGCTAAACTTTCCGGCGCGAACAACTTCCGGCTGGCGCTGATCACGAGTCCTGCGGGCTACGGAAAG < 2:437553/143‑1 AATTTCCCCGCTTATTCGCACCTTCCCTAAGTCGTCCGGTTCGACTCGACCATACCGTGGTTCGCGAGCGCCTGCTGGCTAAACTTTCCGGCGCGAACAACTTCCGGCTGGCGCTGATCACGAGTCCTGCGGGCCACGGAAAG > 2:14098/1‑143 CCCGCTTATTCGCACCTTCCCTAAGTCGTCCGGTTCGACTCGACCATACCGTGGCTCGTGAGCGCCTGCTGGCTAAACTTTCCGCCGCGAACACCTTCCGGCTGGCGCTGATCACGACTCCTGGGGGCTACGGACAGACCcca > 2:1750/1‑140 CCGCTTATTCGCACCTTCCCTAAGTCGTCCGGTTCGACTCGACCATACCGTGGTTCGTGAGCGCCTGCTGGCTAAACTTTCCGGCGCGACCAACTTCCGGCTGGCGCCGATCACGAGTCCTGCGGGCTACAGAAAGACaaacc > 1:226494/1‑138 CGCTTATTCGCACCTTCCCTAAGTCGTCCGTGTCGACTCTGCCATACCGTGGTGCGTGAGCGCCTGCTGGCTAAACTTTCCGGCGCGAACAACTTCCGGCTGGCGCTGATCACGAGTCCCGCGGGCTACGGAAAGACCACCCT > 1:416231/1‑143 GCTTATTCGCACCTTCCCTAAGTCGTCCGGTTCGACTCGACCATACCGTGGTTCGTGAGCGCCTGCTGGCTAAACTTTCCGGCGCGAACAACTTCCGGCTGGCGCTGATCACGAGTCCGGCGGGCTACGGAAAGACCACCCTC > 2:687146/1‑143 CTTATTCGCACCTTCCCTAAGTCGCCCGGTTCGACTCGACCATACCGTGGTTCGTGAGCGCCTGCTGGCTAAACTTTCCGGCGCGAACAACTTCCGGCTGGCGCTGATCACGAGTCCTGCGGGCTACGGAAAGACCACCCTCA < 1:830941/143‑1 CACCTTCCCTAAGTCGTCCGGTTCGACTCGACCATACCGTGGTTCGTGAGCGCCTGCTGGCTAAACTTTCCGGCGCGAACAACTTCCGGCTGGCGCTGATCACGAGTCCTGCGGGCTACGGAAAGACCACCCTCATTTCCCAG > 2:501380/1‑143 ACCTTCCCTAAGTCGTCCGTTGCGACGTGTCTATACCGTGCTTCGTGAGCGCCTGCTGGCTAAACTTTCCGGCGCGAACAACTTCCGGCTGGCGCTGATCACGAGTCCTGCGGGCTACGGAAAGACCACCCTCATTTCCCAGT < 2:157947/143‑1 CCTAAGTCGTCCGGTTCGACTCGACCATACTGTGGTTCGTGAGCGCCTGCTGGCTAAACTTTCCGGCGCGAACAACTTCCGGCTGGCGCTGATCACGAGTCCTGCGCGCTACGGCAAGACCACCCTCACTCCCCCGCGGGCcg > 2:106930/1‑141 CCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2289049‑2288919‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTAAGTCGTCCGGTTCGACTCGACCATACCGTGGTTCGTGAGCGCCTGCTGGCTAAACTTTCCGGCGCGAACAACTTCCGGCTGGCGCTGATCACGAGTCCTGCGGGCTACGGAAAGACCACCCTCATTTCCCAGTGGGCGG > NC_000913/3553103‑3553244 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |