New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3146750 =	45 (0.920)	3 (0.070)	3/260	7.1	7.5%	intergenic (‑13/+106)	yghW/yghX	DUF2623 family protein/pseudogene, dienlactone hydrolase family
	?	NC_000913	3146776 =	33 (0.730)					intergenic (‑39/+80)	yghW/yghX	DUF2623 family protein/pseudogene, dienlactone hydrolase family
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

AAACCGCGTTTATAATCGGCACAGAATTTTGTCACATTAACCGCACTGTCGGCATGCGTTGCTTTTAATCCCGCCATTAAGCCTTTACCAAAATGGTTATTCATCGTTCACCTCATTCGCTATATATTGTCATATATAGCGATATTTTAGGCAAAGAACGACTTTTGCGCACGCTATTTTTTCATGCTTGTTTAAGACGTAATCCCGTAAGAGATAAACCTATCAGGAGAGATATTTATCGAACCATTTCAGTGTCCTTTGCCAGGCAAGATCGGCGGCAGAT  >  NC_000913/3146634‑3146916                                                                                                                                               |                                                                                                                                             aaaCCGCGTTTATAATCGGCACAGAATTTTGTCACATTAACCGCACTGTCGGCATGCGTTGCTTTTAATCCCGCCATTAAGCCTTTACCAAAATGGTTATTCATCGTTCACCTCATTCGCTATATATTGTCATATATAGCGat                                                                                                                                              >  1:330490/1‑143 (MQ=255)  aaCCGCGTTTATAATCGGCACAGAATTTTGTCACATTAACCGCACTGTCGGCATGCGTTGCTTTTAATCCCGCCATTAAGCCTTTACCAAAATGGTTATTCATCGTTCACCTCATTCGCTATATATTGTCATATATAGCGata                                                                                                                                             >  1:492357/1‑143 (MQ=255)   aCCGCGTCTATAATCGGCACAGAATTTTGTCCCATTAACCGCACTGTCGGCATGCGTTGCTTTTAATCCCGCCATTAAGCCTTTACCAACATGGTTATTCATCGTTCACCTCATTCGCTATATATTGTCATATATAGCGatat                                                                                                                                            <  1:606812/143‑1 (MQ=255)    ccGCGTTTATAATCGGCACAGAATTTTGTCACATTAACCGCACTGTCGGCATGCGTTGCTTTTAATCCCGCCATTAAGCCTTTACCAAAATGGTTATTCATCGTTCACCTCATTCGCTATATATTGTCATATATAGCGATAtt                                                                                                                                           >  1:622979/1‑143 (MQ=255)        gTTTATAATCGGCACAGAATTTTGTCACATTAACCGCACTGTCGGCATGCGTTGCTTTTAATCCCGCCATTAAGCCTTTACCAAAATGGTTATTCATCGTTCACCTCATTCGCTATATATTGTCATATATAGCGATATTTTAg                                                                                                                                       <  2:314899/143‑1 (MQ=255)            ataATCGGCACAGAATTTTGTCACATTAACCGCACTGTCGGCATGCGGTGCTTTTAATCCCGCCATTAAGCCTTTACCAAAATGGTTATTCATCGTTCACCTCATTCGCTATATATTGTCATATATAGCGATATTTTAGGCaa                                                                                                                                   >  1:850037/1‑143 (MQ=255)            acaaTCGGCACAGAATTTTGTCACATTAACCGCCCTGTCGGCAGGCTTTGCTTTTAATCCCGACAAAAGGGCTGTACCAAAAAGGTTATTCATCGGTCACCTCATTCGCTATATATTGTCATATATAGCGATATTTTAGGCaa                                                                                                                                   <  1:509214/141‑1 (MQ=255)              aaTCGGCACAGAATTTTGTCACATTAACCGCACTGTCGGCATGCGTTGCTTTTAATCCCGCCATTAAGCCTTTACCAAAATGGTTATTCATCGTTCACCTCATTCGCTATATATTGTCATCTATAGCGATATTTTAGGCAAAg                                                                                                                                 >  2:797165/1‑143 (MQ=255)                tCGGCACAGAATTTTGTCACATTAACCGCACTGTCGGCATGCGTTGCTTTTAATCCCGCCATTAAGCCTTTACCAAAATGGTTATTCATCGTTCACCTCATTCGCTATATATTGTCATATATAGCGATATTTTAGGCAAAGaa                                                                                                                               >  2:291398/1‑143 (MQ=255)                  ggCACAGTATTTTGTCACATTAACCGGACTGCCGGCATGCGTTGCTTTTAATCCCGCCATTAAGCCTTTACCAAAATGGTTATTCATCGTTCACCTCATTCGCTATATATTGTCATATATAGCGATATTTTAGGCAAAGAACg                                                                                                                             <  2:607815/143‑1 (MQ=255)                               gTCACATTAACCGCACTGTCGGCATGCGTTGCTTTTAATCCCGCCATTAAGCCTTTACCAAAATGGTTATTCATCGTTCACCTCATTCGCTATATATTGTCATATATAGCGATATTTTAGGCAAAGAACGACTTTTGCGCACg                                                                                                                <  1:293170/143‑1 (MQ=255)                                tCACATTAACCGCACTGTCGGCATGCGTTGCTTTTAATCCCGCCATTAAGCCTTTACCAAAATGGTTATTCATCGTTCACCTCATTCGCTATATATTGTCATATATAGCGATATTTTAGGCAAAGAACGACTTTTGCGCACGc                                                                                                               >  1:109551/1‑143 (MQ=255)                                  acaTTAACCGCACTGTCGGCATGCGTTGCTTTTAATCCCGCCATTAAGCCTTTACCAAAATGGTTATTCATCGTTCACCTCATTCGCTATATATTGTCATATATAGCGATATTTTAGGCAAAGAACGACTTTTGCGCACGCTa                                                                                                             >  2:837654/1‑143 (MQ=255)                                            cccTGTCGTCATGCGTTGCTTTTAATCCCCCCATTAACCCTGTGCCAACATGGTTATTCATCGTTCACCTCACTCGCTATATATTGTCATATATCGCGATATTTTAGGCAACGCACGACTTTTGCGCCCGCAATTTTTCCaca                                                                                                   >  2:318230/3‑141 (MQ=255)                                            cACTGTCGGCATGCGTTGCTTTTAATCCCGCCATTAAGCCTTTACCAAAATGGTTATTCATCGTTCACCTCATTCGCTATATATTGTCATATATAGCGATATTTTAGGCAAAGAACGACTTTTGCGCACGCTATTTTTTCATg                                                                                                   >  1:760071/1‑143 (MQ=255)                                                gTCGGCATGCGTTGCTTTTAATCCCGCCATTAAGCCTTTACCAAAATGGTTATTCATCGTTCACCTCATTCGCTATATATTGTCATATATAGCGATATTTTAGGCAAAGAACGACTTTTGCGCACGCTATTTTTTCATGCTTg                                                                                               <  1:137335/143‑1 (MQ=255)                                                               ttttAATCCCGCCATTAAGCCTTTACCAAAATGGTTATTCATCGTTCACCTCATTCGCTATATATTGTCCTATATAGCGATATTTTAGGCAAAGAACGACTTTTGCGCACGCTATTTTTACATGCTTGGTTAGGACGTAATcg                                                                                >  1:118330/1‑142 (MQ=255)                                                               ttttAATCCCGCCATTAAGCCTTTACCAAAATGGTTATTCATCGTTCACCTCATTCGCTATATATTGTCATATATAGCGATATTTTAGGCAAAGAACGACTTTTGCGCACGCTATTTTTTCATGCTCGTTTAAGACGTAATcc                                                                                >  2:129013/1‑143 (MQ=255)                                                                 ttAATCCCGCCATTAAGCCTTTACCAAAATGGTTATTCATCGTTCACCTCATTCGCTATATATTGTCATATATAGCGATATTTTAGGCAAAGAACGACTTTTGCGCACGCTATTTTTTCATGCTTGTTTAAGACGTAATCCCg                                                                              <  1:634532/143‑1 (MQ=255)                                                                     tCCCGCCATTAAGCCTTTACCAAAATGGTTATTCATCGTTCACCTCATTCGCTATATATTGTCATATATAGCGATATTTTAGGCAAAGAACGACTTTTGCGCACGCTATTTTTTCATGCTTGTTTAAGACGTAATCCCGTAag                                                                          >  1:694019/1‑143 (MQ=255)                                                                        cGCCATTAAGCCTTTACCAAAATGGTTATTCATCGTTCACCTCATTCGCTATATATTGTCATATATAGCGATCTTTTAGGCAAAGAACGACTTTTGCGCACGCTATTTTTTCATGCTTGTTTAAGCCGTAATCCCGTAAgcga                                                                       >  2:41422/1‑143 (MQ=255)                                                                        cGCCATTAAGCCTTTACCAAAATGGTTATTCATCGTTCACCTCATTCGCTATATATTGTCATATATAGCGATATTTTAGGCAAAGAACGACTTTTGCGCACGCTATTTTTTCATGCTTGTTTAAGACGTAATCCCGTAAgaga                                                                       >  1:362950/1‑143 (MQ=255)                                                                                 gCCTTTACCAAAATGGTTATTCATCGTTCACCTCATTCGCTATATATTGTCATATATAGCGATATTTTAGGCAAAGAACGACTTTTGCGCACGCTATTTTTTCATGCTTGTTTAAGACGTAATCCCGTAAGAGATAAACCTAt                                                              <  2:507452/143‑1 (MQ=255)                                                                                       aCCAGAATGGTTATTGATCGTTCACCTCATTCGCTAGATATTGGCATATATAGCGATATTTTAGGCAAAGAACGACTTTTGCGCACGCTATTTTTTCATGCGTGTTTAAGACGTAATCCCGTAAGAGATAAACCTATCAGgag                                                        <  2:166067/143‑1 (MQ=255)                                                                                         cAAAATGGTTATTCATCGTTCACCTCATTCGCTATATATTGTCATATATAGCGATATTTTAGGCAAAGAACGACTTTTGCGCACGCTATTTTTTCATGCTTGTTTAAGACGTAATCCCGTAAGAGAGAAACCTATCAGgagag                                                      >  2:495766/1‑143 (MQ=255)                                                                                          aaaaTGGTTATTCATCGTTCACCTCATTCGCTATATATTGTCATATATAGCGATATTTTAGGCAAAGAACAACTTTTGCGCACGCTATTTTTTCATGCTTGTTTAAGACGTAATCCGGTAACAGATAAACCTAACAGgagaac                                                     >  2:221479/1‑141 (MQ=255)                                                                                                     tCATCGTTCACCTCATTCGCTATATATCGTCCCCTCTACCTGTGGTTTTGGCAAAGAACGACTTTTGCGCACGCTATTTTTTCATGCTTGTTTAAGACGTAATCCCGTAAGAGATAAACCTATCAGGAGAGATATTTATCGaa                                          <  1:369890/143‑1 (MQ=255)                                                                                                      cATCGTTCACCTCATTCGCTATATATTGTCATATATAGCGATATTTTAGGCAAAGAACGACTTTTGCGCACGCTATTTTTTCATGCTTGTTTAAGACGTAATCCCGTAAGAGATAAACCTATCAGGAGAGATATTTATCGAAc                                         <  2:219999/143‑1 (MQ=255)                                                                                                              aCCTCATTCGCTATATATTGTCATATATAGCGATATTTTAGGCAAAGAACGACTTTTGCGCACGCTATTTTTTCATGCTTGTTTaa                                                                                          >  1:520096/1‑86 (MQ=255)                                                                                                              aCCTCATTCGCTATATATTGTCATATATAGCGATATTTTAGGCAAAGAACGACTTTTGCGCACGCTATTTTTTCATGCTTGTTTaa                                                                                          <  2:520096/86‑1 (MQ=255)                                                                                                                  cATTCGCTATATATTGTCATATATAGCGATATTTTAGGCAAAGAACGACTTTTGCGCACGCTATTTTTTCATGCTTGTTTAAGACGTAATCCCGTAAGAGATAAACCTATCAGGAGAGATATTTATCGAACCATTTCAGTGTc                             <  2:376579/143‑1 (MQ=255)                                                                                                                         tatataTTTTCATATATAGCGATATTTTATGCAAAGAACGACTTTTGCGAACGATATTTTTTCATGCTTGTTTAAGACGTAATCCCGTAAGAGATAAACCTATCAGGAGAGATATTTATCGAACCATTTCAGTGTCCTTTGcc                      <  1:563368/143‑1 (MQ=255)                                                                                                                          atatatTGTCATATATAGCGATATTTTAGGCAAAGAACGACTTTTGCGCACGCTATTTTTTCATGCTTGTTTAAGACGTAATCCCGTAAGAGATAAACCTATCAGGAGAGATATTTATCGAACCATTTCAGTGTCCTTTGCCa                     <  2:797308/143‑1 (MQ=255)                                                                                                                                      atataGCGATATTTTAGGCAAAGAACGACTTTTGCGCACGCTATTTTTTCATGCTTGTTTAAGACGTAATCCCGTAAGAGATAAACCTATCAGGAGAGATATTTATCGAACCATTTCAGTGTCCTTTGCCAGGCAAGATcggc         <  2:664127/143‑1 (MQ=255)                                                                                                                                          aGCGATATTTTAGGCAAAGAACGACTTTTGCGCACGCTATTTTTTCATGCTTGTTTAAGACGTAATCCCGTAAGAGATAAACCTATCAGGAGAGATATTTATCGAACCATTTCAGTGTCCTTTGCCAGGCAAGATCGGCGGCa     <  1:129013/143‑1 (MQ=255)                                                                                                                                             gATATTTTAGGCAAAGAACGACTTTTGCGCACGCTATTTTTTCATGCTTGTTTAAGACGTAATCCCGTAAGAGATAAACCTATCAGGAGAGATATTTATCGAACCATTTCAGTGTCCTTTGCCAGGCAAGATCGGCGGCAGAt  >  1:127201/1‑143 (MQ=255)                                                                                                                                             gATATTTTAGGCAAAGAACGACTTTTGCGCACGCTATTTTTTCATGCTTGTTTAAGACGTAATCCCGTAAGAGATAAACCGATCAGGAGAGATATTTATCGAACCATTGCAGTGTCCTTTGCCAGGCAAGATCGGCGGCAggt  >  1:449924/1‑141 (MQ=255)                                                                                                                                               |                                                                                                                                             AAACCGCGTTTATAATCGGCACAGAATTTTGTCACATTAACCGCACTGTCGGCATGCGTTGCTTTTAATCCCGCCATTAAGCCTTTACCAAAATGGTTATTCATCGTTCACCTCATTCGCTATATATTGTCATATATAGCGATATTTTAGGCAAAGAACGACTTTTGCGCACGCTATTTTTTCATGCTTGTTTAAGACGTAATCCCGTAAGAGATAAACCTATCAGGAGAGATATTTATCGAACCATTTCAGTGTCCTTTGCCAGGCAAGATCGGCGGCAGAT  >  NC_000913/3146634‑3146916

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.