Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 3,553,103 IS5 (+) +4 bp coding (19‑22/2706 nt) malT → mal regulon transcriptional activator

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2288919 =NA (NA)49 (0.870) 38/284 0.5 100% noncoding (1195/1195 nt) IS5 repeat region
?NC_000913 3553103 = 0 (0.000)coding (19/2706 nt) malT mal regulon transcriptional activator
* ? NC_000913 = 2290113NA (NA)81 (1.450) 49/282 0.1 100% noncoding (1/1195 nt) IS5 repeat region
?NC_000913 = 3553106 0 (0.000)coding (22/2706 nt) malT mal regulon transcriptional activator

CAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAAT‑TCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/2289971‑2290113
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cTTAGTTTTGACGGAATCAGCATAGTTAATCACTTCACTGTGGAAAATGAGGAAATATTATTTTTTTTGCGCTTCGTAATTAATGGTTATAAGGTCGGCCAGAAACCTTTCTAATGCAAGCGATGACGTTTTTTTATGTGTC  <  NC_000913/3553106‑3552966
                                                                                                                                                                                                                                                                                             
CAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAAT‑TCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGACCCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCC                                                                                                                                               <  1:301756/143‑1
CAAGAAAACGTCTTTTCTGGTCTGACGGCGCTTACTGCTGAAG‑TCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCATCTTCC                                                                                                                                               <  2:579082/143‑1
 cAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAAT‑TCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCT                                                                                                                                              <  2:29832/142‑1
 AAGAAACTCTCTTTTCTGGTCTGACGGCGCCAAC‑AATGTCTGTCATGGTCGTCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCT                                                                                                                                              <  2:714811/143‑1
 AAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAAT‑TCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCT                                                                                                                                              >  2:46204/1‑143
 AAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAAT‑TCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACCTGTTCGCACCTTCCT                                                                                                                                              >  2:130732/1‑143
 AAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAAT‑TCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCCCCATATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCGTCCT                                                                                                                                              >  1:791101/1‑143
 AAGAAAATCTCTTTTCTGGTCTGACAGCGCTTACTGCTGAAT‑TCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCCGATGACCAACATGATCTCCTATCAGGGACTCGTTCGCACCTTCCT                                                                                                                                              >  1:134600/1‑143
  AGAAAGTCTCTTTGCTGGTCTGACGGCGCTTACTGCTGAAT‑TCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTT                                                                                                                                             <  2:431152/143‑1
  AGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAAT‑TCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCCGGGACTTGTTCGCCCCTTCCct                                                                                                                                             >  2:730459/1‑141
  AGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAAT‑TCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTT                                                                                                                                             <  1:221801/143‑1
   GAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAAT‑TCACTGTTGGCGAAGGTAAGTTGAGGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTA                                                                                                                                            <  1:862391/143‑1
   GAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAAT‑TCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGCCCTGTTCGCACCTTCCTTA                                                                                                                                            >  2:470160/1‑143
   GAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAAT‑TCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTca                                                                                                                                            >  2:706366/1‑141
   GAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAAT‑TCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTA                                                                                                                                            >  1:822721/1‑143
   GAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAAT‑TCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTA                                                                                                                                            <  1:705837/143‑1
    AAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAAT‑TCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGCTGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAG                                                                                                                                           >  1:412443/1‑143
    AAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAAT‑TCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAG                                                                                                                                           >  2:607984/1‑143
    AAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAAT‑TCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAG                                                                                                                                           <  1:117171/143‑1
    AAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAAT‑TCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAG                                                                                                                                           >  1:447787/1‑143
     AAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAAT‑TCACTGTCGGTGAATGTATGTTTTTGACTTATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGT                                                                                                                                          <  1:297968/143‑1
     AAATCTCTTCTCTGGTCTGACGGCGCTTACTGCGGAAT‑TCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGT                                                                                                                                          <  1:417978/143‑1
         CTCTTTTCTGGTCTGACGGCGCTTACTGCTGAAT‑TCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTTTTG                                                                                                                                      >  1:355589/1‑143
          tcgTTTCTGGCGTGGCGGCGGTTACTGCTGAAT‑TCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTTTTGA                                                                                                                                     <  2:111290/140‑1
          TCTTTTCTGGTCTGACGGCGCTTACTGCTGAAT‑TCACTGTCGGCGACGGTAAGTTGATGCCTCATGATGAACCCTGGTCTCTGGCTCCAGATGACAGACATGATCTCGTGTCCGGGCCTTGTTCGCAACTTCCTTAGTctgtg                                                                                                                                     >  1:336008/1‑138
          TCTTTTCTGGTCTGACGGCGCTTACTGCTGAAT‑TCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTTTgtt                                                                                                                                     >  2:139337/1‑140
          TCTTTTCTGGTCTGACGGCGCTTACTGCTGAAT‑TCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTTTTGA                                                                                                                                     <  1:870813/143‑1
          TCTTTTCTGGTCTGACGGCGCTTACTGCTGAAT‑TCACTGTCGGAGAAGGTAAGTTGGTGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTTTgtt                                                                                                                                     >  1:522489/1‑140
           CTTTTCTGGTCTGACGGCGCTTACTGCTGAAT‑TCACTGTCGGCGAAGGTAAGTTTATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTTTTGAC                                                                                                                                    <  1:689265/143‑1
           CTTTTCTGGTCTGACGGCGCTTACTGCTGAAT‑TCACTGTCGGCGAAGGTAAGTTGATGACTGATGATGAACACTGTTCTATGGCTCCAGATGACAAACATGATCTGATATCAGGGACTTGTTCGCACATTCGTTAGTTTTGAC                                                                                                                                    >  1:67319/1‑143
            TTTTCTGGTCTGACGGCGCTTACTGCTGAAT‑TCACTGTCGGCGAAGGTAAGTCGATGTCTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCCCATATCCGGGACTTGTTCGCAACTTCCTTAGTTTgttgt                                                                                                                                   >  2:400671/1‑138
                      TGAGGGCGCCTACTGCTGAAT‑TCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTTTTGACGGAATCAGCAT                                                                                                                         >  1:115400/1‑143
                      TGACGGCGCTTACTGCTGAAT‑TCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTTTTGACGGAGTCAGCAc                                                                                                                         >  1:304537/1‑142
                             GCTTACTGCTGAAT‑TCACTGTCGGCGAAGGTAAGTTGCTGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTTTCGACGGAATCAGAATAGctcat                                                                                                                  >  2:870963/1‑138
                              CTTACTGCTGAAT‑TCACTGTCGGCGAACGTCAGTAGATGGCTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTTTTGACGGAATCAGCATAGTTAATC                                                                                                                 <  1:687062/143‑1
                               TTACTGCTGAAT‑TAACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTTTTGACGGAATCAGCATAGTTAATCA                                                                                                                <  1:869442/143‑1
                                   TGCTGAAT‑TCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCCGGGACTTGTTCGCACCTTCCTTAGTCTTGACGGAACCAGCATACTTAATCACTTC                                                                                                            >  2:261292/1‑143
                                   TGCTGAAT‑TCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCGCCTTCCTTAGTTTTGACGGAATCAGCATAGTTAATTACTTC                                                                                                            >  1:285190/1‑143
                                   TGCTGAAT‑TCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTTTTGACGGAATCAGCATAGTTAATCACTTC                                                                                                            >  1:554414/1‑143
                                   TGCTGAAT‑TCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTTTTGACGGAATCAGCATAGTTAATCACTTC                                                                                                            >  1:177548/1‑143
                                    GCTGAAT‑TCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTTTTGACGGAATCGGCATAGGTAGTCACTGCA                                                                                                           >  1:134604/1‑143
                                     CTGAAT‑TCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTTTTCACGGAATCAGCATAGGTAATCACTTCAC                                                                                                          >  2:527484/1‑143
                                      TGAAT‑TCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTTTTGACGGAATCAGCATAGTTAATCACTTCACT                                                                                                         <  1:813904/143‑1
                                        AAT‑TCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTTTTGACGGAATCAGCATAGTTAATCACTTCCCTGT                                                                                                       >  1:1016300/1‑143
                                          T‑TCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTTTTGACGGAATCAGCATAGTTAATCACTTCACTGTGG                                                                                                     >  2:599441/1‑143
                                            TCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCGATGGCTCCAGATGCCATACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTTTTGACGGAATCAGCATAGTTAATCACTTCACTGTGGA                                                                                                    <  2:249752/143‑1
                                              ACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTTTT                                                                                                                                       >  2:591894/1‑106
                                              ACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTTTT                                                                                                                                       <  1:591894/106‑1
                                                  TCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCGCATATCAGGGACTTGTTCGCACCTTCCTTAGTTTTGACGGAATCAGCATAGTTAATCACTTCACTGCGGAAAAGGA                                                                                              >  2:642319/1‑143
                                                      CGAAGGTAAGTTTATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATATCATATCAGGGACTTGTTCGCACCTTCCTTAGGTTTGACGGAATCAGCATAGTTAATCACTTCACTGCGGAACATGAGGca                                                                                          >  2:104205/1‑141
                                                      CGAAGGTAAGTTGATGACTCATGATGCACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTTTTGACGGAATCAGCATAGTTAATCACTTCACTGTGGAAAATGAGGAA                                                                                          <  2:8413/143‑1
                                                       gtAGGTAAGTTGATGACTCATGATGAACGCTGTTCGATGGCTCCAGATGACAAACATGATCTCATATCATGGACTTGTTCGCACCTTCCTTAGTTTTGACGGAATCAGCATAGTTAATCACTTCACTGTGGAAAATGAGGAAA                                                                                         <  2:355147/141‑1
                                                          GGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTTTTGACGGAATCAGCATAGTTAATCACTTCACTGTGGAAAATGAGGAAATAT                                                                                      >  2:337038/1‑143
                                                              AGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTTTTGACGGAATCAGCATAGTTAATCACTTCACTGTGGAAAATGAGGAAATATTATT                                                                                  >  2:971960/1‑143
                                                                  GATGACTCATGGTGAACCCTGTTCGATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTTTTGACGGAATCAGCATAGTTAATCACTTCACTGTGGAAAATGAGGAAATATTATTTTTT                                                                              <  2:3865/143‑1
                                                                        TCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTCGTTTTGACGGAATCAGCATAGTTAATCACTTCACTGTGGAAAATGAGGAAATATTATTTTTTTTGCGC                                                                        >  1:48704/1‑143
                                                                         CATGATGAACCCCGTTCTATGGCTCCAGCTGACAAACATCATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTTTTGACGGAATCAGCATAGTTATTCACTTCACTGTGGAAAATGAGGAAATATTATTTTTTTTGCGCT                                                                       <  1:504998/143‑1
                                                                           TGATGAACCCTGTTCTATGGCTCCAGATGACAATCATGATCTCATATGTGGGGCTTCATCCCACCTTCCTTAGTTTTGACGGAATCAGCATAGTTAATCGCTTCACTGTGGAAAATGAGGAAATATTATTTTTTTTGCGCTTC                                                                     <  1:1007798/143‑1
                                                                              TGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTTTTGACGGAATCAGCATAGTTAATCACTTCACTGTGGAGAATGAGGAAATATTATTTTTTTTGCGCTTCGTA                                                                  >  2:836509/1‑143
                                                                                  CCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTTTTGACGGAATCAGCATAGTTAATCACTTCACTGTGGAAAATGAGGAAATATTATTTTTTTTGCGCTTGGTAATTA                                                              >  2:293362/1‑143
                                                                                   CCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTTTTGACGGAATCAGCATAGTTAATCACTTCACTGTGGAAAATGAGGAAATATTATTTTTTTTGCGCTTCGTAATTAA                                                             >  2:892621/1‑143
                                                                                            TGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTTTTGACGGAATCAGCATAGTTAATCACTTCACTGTGGAAAATGAGGAAATATTATTTTTTTTGTGCTTCGTAATTACTGGTTATAA                                                    >  2:355998/1‑143
                                                                                              GCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTTTTGACGGAATCAGCATAGTTAATCACTTCACTGTGGAAAATGAGGAAATATTATTTTTTTTGCGCTTCGTAATTAATGGTTATAAGa                                                  >  2:822862/1‑142
                                                                                                tgactATGACAAACCTGATCTCATATCAGAGACTTGTTAGTACCTTCCTTATTTTTGACGGAATCAGCATAGTGAATTACTTCACTGGGGAAAATGAGGAAATATTATTTTTTTTGCGCTTCGTAATTAATGGTTATAAGGTC                                                <  2:576302/138‑1
                                                                                                tgCAGATGACAAAGATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTTTTGACGGAATCAGCATAGTTAATCACTTCACTGTGGAAAATGAGGAAATATTATTTTTTTTGCGCTTCGTAATTAATGGTTATAAGGTC                                                <  2:699746/141‑1
                                                                                                TCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTTTTGACGGAATCAGCATAGTTAATCACTTCACTGTGGAAAATGAGGAAATATTATTTTTTTTGCGCTTCGTAATTAATGGTTATAAGGTC                                                <  2:646950/143‑1
                                                                                                   AGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTTTTGACGGAATCAGCATAGTTAATCACTTCACTGTGGAACACGCGGGCCTGTTCTTTTTTTTGCGCTTCGAAATAAATGGTTAAAAGGTCGGC                                             >  1:11171/1‑143
                                                                                                   AGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTTTTGACGGAATCAGCATAGTTAATCACTTCACTGTGGAAAATGAGGAAATATTATTTTTTTTGCGCTTCGTAATTAATGGTTATAAGGTCGGC                                             <  1:944220/143‑1
                                                                                                          AAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTTTTGACGGAATCAGCATAGTTAATCACTTCACTGTGGAAAATGAGGAAATATTATTTTTTTTGCGCTTCGTAATTAATGGTTATAAGGTCGGCCAGAAAC                                      >  2:484933/1‑143
                                                                                                            ACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTTTTGACTGTATCAGCATAGTTATTCACTTCACTGTGGAAAATGAGGAAATATTATTTTTTTTGCGCTTCGTAATTAATGGTTATAAGGTCGGCCAGAAACCT                                    <  1:615930/143‑1
                                                                                                                GATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTTTTGACGGAATCAGCATAGTTAATCACTTCACTGTGGAAAATGAGGAAATATTATTTTTTTTGCGCTTCGTAATTAATGGTTATAAGGTGGGCGAGACACCTTTCT                                >  2:591850/1‑143
                                                                                                                     CATATCAGGGACTTGTTCGCACCTTCCTTAGTTTTGACGGAATCAGCATAGTTAATCACTTCACTGTGGAAAATGAGGAAATATTATTTTTTTTGCGCTTCGTAATTAATGGTTATAAGGTCGGCCAGAAACCTCTCTAATGC                           >  2:378708/1‑143
                                                                                                                       TATCAGGGACTTGTTCGCACCTTCCTTAGTTTTGACGGAATCAGCATAGTTAATCACTTCACTGTGGAAAATGAGGAAATATTATTTTTTTTGCGCTTCGTAATTAATGGTTATAAGGTCGGCCAGAAACCTTTCTAATGCAA                         >  1:20980/1‑143
                                                                                                                         TCAGGGACTTGTTCGCACCTTCCTTAGTTTTGACGGAATCAGCATAGTTAATCACTTCACTGTGGAAAATGAGGAAATATTATTTTTTTTGCGCTTCGTAATTAATGGTTATAAGGTCGGCCAGAAACCTTTCTAATGCAAGC                       >  1:848929/1‑143
                                                                                                                         TCAGGGACTTGTTCGCACCTTCCTTAGTTTTGACGGAATCAGCATAGTTAATCACGTCACGGTGGAAAATGAGGAAATATTATTTTTTTTGCGCTTCGTAATTAATGGTTATAAGGTCGGCCAGAAACCTTTCTAATGCAAGC                       >  1:41423/1‑143
                                                                                                                            GGGACTTGTTCGCACCTTCCTTAGTTTTGACGGAATCAGCATAGTTAATCACTTCACTGTGGAAAATGAGGAAATATTATTTTTTTTGCGCTTCGTAATTAATGGTTATAAGGTCGGCCAGAAACCTTTCTAATGCAAGCGAT                    <  1:731330/143‑1
                                                                                                                             GGACTTGTTCGCACCTTCCTTAGTTTTGACGGAATCAGCATAGTTAATCACTTCACTGTGGAAAATGAGGAAATATTATTTTTTTTGCGCTTCGTAATTAATGGTTATCAGGTCGGCCAGAAACCTTTCTAATACAAGCGATG                   >  2:646669/1‑143
                                                                                                                                   GTTCGCACCTTCCTTAGTTTTGACGGAATCAGCATAGTTAATCACTTCACTGTGGAAAATGAGGAAATATTATTTTTTTTGCGCTTCGTAATTAATGGTTATAAGGTCGGCCAGAAACCTTTCTAATGCAAGCGATGACGTTT             <  2:177548/143‑1
                                                                                                                                       GCACCTTCCTTAGTTTTGACGGAATCAGCATAGTTAATCACTTCACTGTGGAAAATGAGGAAATATTATTTTTTTTGCGCTTCGTAATTAATGGTTATAAGGTCGGCCAGAAACCTTTCTAATGCAAGCGATGACGTTTTATT         >  2:241136/1‑143
                                                                                                                                       GCACCTGCCTTAGTTTTGAAGGAATCAGCATAGTTAATCACTTCACTGTGGAAAATGAGGAAGTATTATTTTTTTTGCGCTTCGTAATTAATGGTTATAAGGTCGGCCAGAAACCTTTCTAATGCAAGCGATGACGTTTTTTT         <  2:304537/143‑1
                                                                                                                                        CACCTTCCTTAGTTTTGCCTGATTCAGCATTGTTACTCACTTCACTGTTGAAAATGAGGAAATATTATTTTTTTTGCGCTTCGTAATTAATCGTTATAAGGTCGGCCAGATACCTTTCTAATTCAAGCGATGACGTTTTTTTA        <  2:529835/143‑1
                                                                                                                                           CTTGCTTAGTTGTGACCGAATCAGAATAGTTAATCACTTCACTGTGGAAAATGAGGAAATATTATTTTTTTTGCGCTTCGTAATTAATGGTTATAAGGTCGGCCAGAAACCTTTCTAATGCAAGCGATGACGTTTTTTTATGT     <  1:187102/143‑1
                                                                                                                                           CTTCCTTAGTTTTGACGGAATCAGCATAGTTAATCACTTCACTGTGGAAAATGAGGAAATATTATTTTTTTTGCGCTTCGTAATTAATGGTTATATAGTCTGCCAGAAACCTTTCTACTGCAAGCGATGAACTGTTTTTATGT     >  2:211351/1‑143
                                                                                                                                              CCTTAGTTTTGACGGAATCAGCATAGTTAATCACTTCACTGTGGAAAATGAGGAAATATTATTTTTTTTGCGCTTCGTAATTAATGGTTATAAGGTCGGCCAGAAACCTTTCTAATGCAAGCGATGACGGTTTTTTATGTGTC  >  1:438287/1‑143
                                                                                                                                                                                                                                                                                             
CAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAAT‑TCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/2289971‑2290113
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cTTAGTTTTGACGGAATCAGCATAGTTAATCACTTCACTGTGGAAAATGAGGAAATATTATTTTTTTTGCGCTTCGTAATTAATGGTTATAAGGTCGGCCAGAAACCTTTCTAATGCAAGCGATGACGTTTTTTTATGTGTC  <  NC_000913/3553106‑3552966

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.