| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 4,001,645 | Δ5 bp | coding (220‑224/951 nt) | corA → | magnesium/nickel/cobalt transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4001644 | 1 (0.020) | 48 (0.850) | 41/284 | 0.4 | 98.0% | coding (219/951 nt) | corA | magnesium/nickel/cobalt transporter |
| ? | NC_000913 | 4001650 = | 1 (0.020) | coding (225/951 nt) | corA | magnesium/nickel/cobalt transporter | |||||
AGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCC > NC_000913/4001503‑4001783 | aGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGAGATCGACGCATCGGCCCGTTTCTTTGAAGACGACGCCGGCCTGCATc > 1:843940‑M1/1‑142 (MQ=255)aGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACGGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGGCGACGACGGCCTGCATc > 1:362314‑M1/1‑142 (MQ=255) tGGATTGATCTTGGCGAACCGGACGACGACCAGCGACTGCGCGTACAAGCTGAACTGGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctcct < 1:376610‑M1/143‑6 (MQ=255) ggttgaTCGTGCCGAACCGGACGACTACGAGCGACGGCGCGTACAGTCTGAACTTGGCCAGAGCCTGGCTTTCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttc < 1:517725‑M1/141‑8 (MQ=255) cTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttct < 2:417062‑M1/143‑15 (MQ=255) tCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttga < 1:492014‑M1/143‑19 (MQ=255) aCCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagat > 1:939095‑M1/1‑121 (MQ=255) gacgacgacGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTGTGCAGACGACGACGGCCTGCATctgattcgtcgtctttggagacgcgg > 2:158209‑M1/1‑117 (MQ=255) caccgacgaGGTACTGCGCCTACAAGCTGAACCTGGCCGGAGCCGGGCATGCCGCCCGGAACTGGAAGACATCGGAGGATCGGCACGTTTCTTCGAAGACGCCGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCTGaa < 2:887298/140‑1 (MQ=255) cgcgacgggcGACTGCGCCTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGCAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaag < 2:398542‑M1/141‑30 (MQ=255) gacgaGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttggagatgcggacgctc > 1:595345‑M1/1‑111 (MQ=255) aGCGACTGCGCGTACAATCTGAACTGGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgc < 1:495756‑M1/143‑37 (MQ=255) gCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgcc < 1:695324‑M1/143‑38 (MQ=255) gCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagaggcgggagatcacgcc > 1:768736‑M1/1‑106 (MQ=255) cTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccgcga > 1:727386‑M1/1‑102 (MQ=255) tGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaa > 1:807247‑M1/1‑101 (MQ=255) tGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaa > 1:1015653‑M1/1‑101 (MQ=255) cgcgTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaact < 2:694521‑M1/143‑45 (MQ=255) gcgTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATAGCAGCATCGGCACGGGTCTTTGGAGACGACGACGGCCGGCATctccttcttcttctttgaagatgcggaagagctcgccgggaactc > 1:49940‑M1/1‑98 (MQ=255) gTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGAGGACGACGGCCTGCATctccttcttcttctttgaagctgcggaagatcacgccggtaactcca > 1:508066‑M1/1‑96 (MQ=255) tCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgacgatgcggaagatcacgccggtaactccactgtgg > 1:919780‑M1/1‑90 (MQ=255) tGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggca < 2:908132‑M1/143‑56 (MQ=255) tGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggca > 1:495573‑M1/1‑88 (MQ=255) aaCTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatt < 1:454770‑M1/143‑58 (MQ=255) cTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcattta < 1:247386‑M1/143‑60 (MQ=255) ttGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccgtcttcttctttgaagatgcgggagatgacgccggtaactccactttggcatctac > 1:262865‑M1/1‑83 (MQ=255) aaCCGGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACTACGACGGCCTGCACctcttaatacttctttgaagatgcggaagatcacgccggtaactccactgttgcatttaccatccgtgatggtcgt < 2:254182‑M1/143‑77 (MQ=255) ccgcccgGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctg > 2:787177‑M1/1‑64 (MQ=255) ccgGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgttta > 2:304766‑M1/1‑60 (MQ=255) ggAAGACATCGAAGCCTCGGCACGTTTCCTTGCAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtcgcatttaccctccgtgatggtcgtctgtttactctgcgt < 1:238486‑M1/143‑92 (MQ=255) gAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtg > 1:541048‑M1/1‑51 (MQ=255) gAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatcagtgatggtcgtctgtttactctgcgtg > 1:49092‑M1/1‑51 (MQ=255) aaGACATCGAAGCATCGTCACGTTTCTTTGAAGACCACGACGGCCTGCATctcctccctctcctgtgaaaatgcaaaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtga < 1:231550‑M1/143‑94 (MQ=255) aaGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtga < 1:304766‑M1/143‑94 (MQ=255) cGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaa < 1:688862‑M1/143‑101 (MQ=255) cGAAGCATCGGCACGTTTCGTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaa < 2:1015653‑M1/143‑101 (MQ=255) attggcacGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagaccacgccggtaactccactgcggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgccc > 1:908397‑M1/4‑37 (MQ=255) gCACGTTTCTTGGAAGACGTGGCCGGCCTGCATctccttcgtcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgctt < 2:76473‑M1/143‑111 (MQ=255) tttCTTTGAAGACGACGGCGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgt < 2:299686‑M1/143‑116 (MQ=255) tttCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcaagccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttcctgtgggttggggtggactgcccgcttttagt > 1:420244‑M1/1‑28 (MQ=255) tCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactgcactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtct < 2:867417‑M1/143‑118 (MQ=255) tCTTTGAAGACGACGACGGCCTGCATctccttctgcttctttgaagatgcggaagatcacgccggtaactcgactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtct < 2:200070‑M1/143‑118 (MQ=255) cTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaagtcaactgtggcatttaacatccgtgatggtcgtcggtttactctgcgtgagcgtggactgccgtcttttcggctg > 1:297591‑M1/1‑25 (MQ=255) tGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtat > 1:838003‑M1/1‑22 (MQ=255) gcagaCGACGACGGCCTGCATctccgtcttcgtctttgaagatgcggaagagcacgccggtaactccactgtggcagttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatc < 1:918813‑M1/141‑123 (MQ=255) aGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttgtcgtctgtatcgt > 1:108220‑M1/1‑19 (MQ=255) gacgacgacGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgta > 2:695487‑M1/1‑18 (MQ=255) gacgGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtatgcgtg < 1:787177‑M1/143‑132 (MQ=255) gCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttctcggctgtatcgtctgcgtgcccgtagc > 1:5794‑M1/1‑4 (MQ=255) | AGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCC > NC_000913/4001503‑4001783 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |