| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 4,001,645 | Δ5 bp | coding (220‑224/951 nt) | corA → | magnesium/nickel/cobalt transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4001644 | 1 (0.020) | 48 (0.850) | 41/284 | 0.4 | 98.0% | coding (219/951 nt) | corA | magnesium/nickel/cobalt transporter |
| ? | NC_000913 | 4001650 = | 1 (0.020) | coding (225/951 nt) | corA | magnesium/nickel/cobalt transporter | |||||
GGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGC > NC_000913/4001508‑4001788 | agtatggattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagagatcgacgcatcggcccgtttctttgaagacgacgccggcctgcatc > 1:843940‑M2/143‑143 (MQ=255)agtatggattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaacgggaagacatcgaagcatcggcacgtttctttgaaggcgacgacggcctgcatc > 1:362314‑M2/143‑143 (MQ=255) tggattgatcttggcgaaccggacgacgaccagcgactgcgcgtacaagctgaactgggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCct < 1:376610‑M2/5‑1 (MQ=255) ggttgatcgtgccgaaccggacgactacgagcgacggcgcgtacagtctgaacttggccagagcctggctttccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCcttc < 1:517725‑M2/7‑1 (MQ=255) cttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCcttcttcttct < 2:417062‑M2/14‑1 (MQ=255) tcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGa < 1:492014‑M2/18‑1 (MQ=255) accggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGAt > 1:939095‑M2/122‑143 (MQ=255) caccgacgaGGTACTGCGCCTACAAGCTGAACCTGGCCGGAGCCGGGCATGCCGCCCGGAACTGGAAGACATCGGAGGATCGGCACGTTTCTTCGAAGACGCCGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCTGaa < 2:887298/140‑1 (MQ=255) gacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctgtgcagacgacgacggcctgcatCTGATTCGTCGTCTTTGGAGACGCgg > 2:158209‑M2/118‑143 (MQ=255) cgcgacgggcgactgcgcctacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgcagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAg < 2:398542‑M2/29‑1 (MQ=255) gacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGGAGAtgcggacgctc > 1:595345‑M2/112‑138 (MQ=255) agcgactgcgcgtacaatctgaactgggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGc < 1:495756‑M2/36‑1 (MQ=255) gcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGcc < 1:695324‑M2/37‑1 (MQ=255) gcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGAGGCGGGAGATCACGcc > 1:768736‑M2/107‑143 (MQ=255) ctgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACgccgcga > 1:727386‑M2/103‑140 (MQ=255) tgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTaa > 1:807247‑M2/102‑143 (MQ=255) tgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTaa > 1:1015653‑M2/102‑143 (MQ=255) cgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACt < 2:694521‑M2/44‑1 (MQ=255) gcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatagcagcatcggcacgggtctttggagacgacgacggccggcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGAGCTCGCCGGGAACTc > 1:49940‑M2/99‑143 (MQ=255) gtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagaggacgacggcctgcatCTCCTTCTTCTTCTTTGAAGCTGCGGAAGATCACGCCGGTAACTCCa > 1:508066‑M2/97‑143 (MQ=255) tctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGACGATGCGGAAGATCACGCCGGTAACTCCACTGTgg > 1:919780‑M2/91‑143 (MQ=255) tgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCa < 2:908132‑M2/55‑1 (MQ=255) tgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCa > 1:495573‑M2/89‑143 (MQ=255) aacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCAtt < 1:454770‑M2/57‑1 (MQ=255) cttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTa < 1:247386‑M2/59‑1 (MQ=255) ttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCGTCTTCTTCTTTGAAGATGCGGGAGATGACGCCGGTAACTCCACTTTGGCATCTAc > 1:262865‑M2/84‑143 (MQ=255) aaccggcccggaactggaagacatcgaagcatcggcacgtttctttgaagactacgacggcctgcacCTCTTAATACTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTTGCATTTACCATCCGTGATGgtcgt < 2:254182‑M2/76‑1 (MQ=255) ccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTg > 2:787177‑M2/65‑143 (MQ=255) ccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTa > 2:304766‑M2/61‑143 (MQ=255) ggaagacatcgaagcctcggcacgtttccttgcagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTCGCATTTACCCTCCGTGATGGTCGTCTGTTTACTCTgcgt < 1:238486‑M2/91‑1 (MQ=255) gaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcgtg > 1:541048‑M2/52‑143 (MQ=255) gaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCAGTGATGGTCGTCTGTTTACTCTgcgtg > 1:49092‑M2/52‑143 (MQ=255) aagacatcgaagcatcgtcacgtttctttgaagaccacgacggcctgcatCTCCTCCCTCTCCTGTGAAAATGCAAAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcgtga < 1:231550‑M2/93‑1 (MQ=255) aagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcgtga < 1:304766‑M2/93‑1 (MQ=255) cgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGaa < 1:688862‑M2/100‑1 (MQ=255) cgaagcatcggcacgtttcgttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGaa < 2:1015653‑M2/100‑1 (MQ=255) attggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGACCACGCCGGTAACTCCACTGCGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGccc > 1:908397‑M2/38‑143 (MQ=255) gcacgtttcttggaagacgtggccggcctgcatCTCCTTCGTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCtt < 2:76473‑M2/110‑1 (MQ=255) tttctttgaagacgacggcggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGt < 2:299686‑M2/115‑1 (MQ=255) tttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCAAGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTCCTGTGGGTTGGGGTGGACTGCCCGCTTTTAGt > 1:420244‑M2/29‑143 (MQ=255) tctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTGCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCt < 2:867417‑M2/117‑1 (MQ=255) tctttgaagacgacgacggcctgcatCTCCTTCTGCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCGACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCt < 2:200070‑M2/117‑1 (MQ=255) ctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAAGTCAACTGTGGCATTTAACATCCGTGATGGTCGTCGGTTTACTCTGCGTGAGCGTGGACTGCCGTCTTTTCGGCTg > 1:297591‑M2/26‑143 (MQ=255) tgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTAt > 1:838003‑M2/23‑143 (MQ=255) gcagacgacgacggcctgcatCTCCGTCTTCGTCTTTGAAGATGCGGAAGAGCACGCCGGTAACTCCACTGTGGCAGTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATc < 1:918813‑M2/122‑1 (MQ=255) agacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTGTCGTCTGTATCGt > 1:108220‑M2/20‑143 (MQ=255) gacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTa > 2:695487‑M2/19‑143 (MQ=255) gacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTg < 1:787177‑M2/131‑1 (MQ=255) gcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTCTCGGCTGTATCGTCTGCGTGCCCGTAGc > 1:5794‑M2/5‑143 (MQ=255) | GGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGC > NC_000913/4001508‑4001788 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |