mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 13 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4080808 | 231 (1.800) | 6 (0.050) | 5/416 | NT | 2.7% | coding (421/930 nt) | fdhE | formate dehydrogenase formation protein |
| ? | NC_000913 | = 4080857 | 208 (1.680) | coding (372/930 nt) | fdhE | formate dehydrogenase formation protein | |||||
| * | ? | NC_000913 | = 4054088 | 164 (1.280) | 3 (0.020) | 3/418 | NT | 1.9% | coding (1191/1410 nt) | glnG | fused DNA‑binding response regulator in two‑component regulatory system with GlnL: response regulator/sigma54 interaction protein |
| ? | NC_000913 | = 4054106 | 154 (1.240) | coding (1173/1410 nt) | glnG | fused DNA‑binding response regulator in two‑component regulatory system with GlnL: response regulator/sigma54 interaction protein | |||||
| * | ? | NC_000913 | = 3702789 | 138 (1.070) | 3 (0.020) | 3/424 | NT | 2.1% | coding (80/1005 nt) | dppF | dipeptide/heme ABC transporter ATPas |
| ? | NC_000913 | = 3702929 | 150 (1.190) | coding (920/984 nt) | dppD | dipeptide/heme ABC transporter ATPas | |||||
| * | ? | NC_000913 | = 3529405 | 172 (1.340) | 3 (0.020) | 3/412 | NT | 1.9% | coding (58/402 nt) | hslR | ribosome‑associated heat shock protein Hsp15 |
| ? | NC_000913 | = 3529461 | 146 (1.190) | coding (114/402 nt) | hslR | ribosome‑associated heat shock protein Hsp15 | |||||
| * | ? | NC_000913 | = 3515784 | 171 (1.330) | 3 (0.020) | 3/414 | NT | 1.8% | coding (130/837 nt) | dam | DNA adenine methyltransferase |
| ? | NC_000913 | = 3515788 | 172 (1.400) | coding (126/837 nt) | dam | DNA adenine methyltransferase | |||||
| * | ? | NC_000913 | 2875690 = | 117 (0.910) | 4 (0.030) | 4/418 | NT | 3.6% | coding (640/909 nt) | cysD | sulfate adenylyltransferase, subunit 2 |
| ? | NC_000913 | 2875715 = | 102 (0.820) | coding (615/909 nt) | cysD | sulfate adenylyltransferase, subunit 2 | |||||
| * | ? | NC_000913 | 2796365 = | 97 (0.750) | 4 (0.030) | 4/412 | NT | 4.2% | coding (422/450 nt) | ygaU | uncharacterized protein |
| ? | NC_000913 | 2796386 = | 91 (0.740) | coding (401/450 nt) | ygaU | uncharacterized protein | |||||
| * | ? | NC_000913 | = 2707404 | 107 (0.830) | 4 (0.030) | 4/432 | NT | 3.6% | coding (398/480 nt) | rseC | SoxR iron‑sulfur cluster reduction factor component |
| ? | NC_000913 | = 3187426 | NA (NA) | noncoding (1331/1331 nt) | IS2 | repeat region | |||||
| * | ? | NC_000913 | = 2495448 | 179 (1.390) | 4 (0.030) | 4/422 | NT | 2.2% | intergenic (‑156/‑197) | yfdY/lpxP | DUF2545 family putative inner membrane protein/palmitoleoyl‑acyl carrier protein (ACP)‑dependent acyltransferase |
| ? | NC_000913 | = 2495449 | 178 (1.420) | intergenic (‑157/‑196) | yfdY/lpxP | DUF2545 family putative inner membrane protein/palmitoleoyl‑acyl carrier protein (ACP)‑dependent acyltransferase | |||||
| * | ? | NC_000913 | = 2021654 | 102 (0.790) | 4 (0.030) | 4/414 | NT | 3.6% | coding (151/366 nt) | fliO | flagellar biosynthesis protein |
| ? | NC_000913 | = 2021673 | 118 (0.960) | coding (170/366 nt) | fliO | flagellar biosynthesis protein | |||||