New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 292301	77 (1.260)	5 (0.090)	5/264	7.6	6.4%	intergenic (+70/+21)	yagJ/yagK	CP4‑6 prophage; uncharacterized protein;Phage or Prophage Related/CP4‑6 prophage; conserved protein
	?	NC_000913	= 292302	75 (1.320)					intergenic (+71/+20)	yagJ/yagK	CP4‑6 prophage; uncharacterized protein;Phage or Prophage Related/CP4‑6 prophage; conserved protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GCAGGATGCTGTTGCTACCGCTGAAAATGCAGAAACGTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGGAAGTCAGTA  >  NC_000913/292159‑292442                                                                                                                                               |                                                                                                                                              gCAGGGTGCTGTTGCTACCGCTGAAAATGCAGAAACGTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCa                                                                                                                                               <  1:13811/143‑1 (MQ=255) ccacgcggCTGATTCTACCGTTGGAACTCCGGAAATGTTATTTAGCAGCGAACTTGCTGATGACTATCAGTTATCTATAGCAAATTGCCTAACGAATCTGTATTTTAGTAATTTTTGGAAACAATACAAATAAGGCCTTTTCa                                                                                                                                               <  2:98969/136‑1 (MQ=255)         cggtgtcTACCGCTGAAAATGCAGAAACGTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAg                                                                                                                                       <  1:243692/137‑1 (MQ=255)         cTGTTGCTACCGTTGAAATTGCATAAACTTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAg                                                                                                                                       <  1:133585/143‑1 (MQ=255)               cTACCGCTGAAAATGCAGAAACGTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCAtt                                                                                                                                 <  1:777649/143‑1 (MQ=255)                tACCGCTGAAAATGCAGAAACGTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTa                                                                                                                                >  2:1082987/1‑143 (MQ=255)                tACCGCTGAAAATGCAGAAACGTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTa                                                                                                                                >  1:230367/1‑143 (MQ=255)                     cTGAAAATGCAGAAACGTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGAc                                                                                                                           >  2:404515/1‑143 (MQ=255)                      tGAAAATGCAGAAACGTTAGTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACt                                                                                                                          <  1:169180/143‑1 (MQ=255)                        aaaaTGCAGAAACGTTATTTAGTAGCGGACTTGCTGATGCATCTACGCAGACTTAAGAAAAGTGTGTCGAGATGTCACACGCGAGTAATTTTTTGCAACAATACAAATAAGGCCTTCTCACTGAGACGGCCCTTACGGACCTa                                                                                                                        >  1:1112478/1‑143 (MQ=255)                        aaaaTGCAGAAACGTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTa                                                                                                                        >  2:556421/1‑143 (MQ=255)                         aaaTGTATAAATGTTCTTTAGTAGCGGACTTGCTGATGATTATCAGTAATTTATAGAAAATTGCGTAACTAATCTGCATTTTATTAATTTTTTGAAACAATACAAATAAGTCCTTCTCACTGAGAAGGCTATTACCGACTTAc                                                                                                                       <  2:634510/143‑1 (MQ=255)                          aaTGCAGAAACGTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAGTACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACa                                                                                                                      >  1:1103852/1‑143 (MQ=255)                          aaTGCAGAAACGTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACa                                                                                                                      <  1:134647/143‑1 (MQ=255)                            tGCAGAAACGTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTTTAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCAATGAGAAGGCCATTACCGACTTACAGt                                                                                                                    >  2:814997/1‑143 (MQ=255)                            tGCAGAAACGTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGt                                                                                                                    >  1:798952/1‑143 (MQ=255)                                gAAACGTTATTCTGTAGGGGACTTGCTGATGACTATCAGTAATCTATAGAAAAATGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGa                                                                                                                <  2:592102/143‑1 (MQ=255)                                   aCGTTATTTAGTAGCGGACTTGCTGATGACTATCAGAAAAACATAGTAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGAttt                                                                                                             >  1:763134/1‑143 (MQ=255)                                    cGTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAATGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTg                                                                                                            <  1:638269/143‑1 (MQ=255)                                     gTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCCCTGAGAAGGCCATTACCGACATACAGTTCGATTTgg                                                                                                           >  2:24693/1‑143 (MQ=255)                                     gTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTgg                                                                                                           <  1:367857/143‑1 (MQ=255)                                      tgaTTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAAGTGCGTAACGCAACTGCATGTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGCATGACAGTTCGATTTGGc                                                                                                          >  2:65669/3‑143 (MQ=255)                                          ttAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACa                                                                                                      <  2:414274/143‑1 (MQ=255)                                             gtagCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTTCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCAATGAGAAGTCCATTACCGACTTACAGTTCGATTTGGCTACAGcc                                                                                                   <  2:340407/143‑1 (MQ=255)                                                gCGGACTTGCTGATGACTATCAGTAATCTATATAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGaa                                                                                                >  2:581731/1‑143 (MQ=255)                                                gCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGaa                                                                                                >  1:940858/1‑143 (MQ=255)                                                  ggACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTTCAGTTCGATTTTGCTACAGCCGAAGt                                                                                              >  1:137926/1‑143 (MQ=255)                                                   gACGTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGtt                                                                                             <  2:734500/143‑1 (MQ=255)                                                      ttgttgATGATTATTAGTAATCTCTAGATAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAATTAAGGCCTTCTCACTGATAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACg                                                                                          <  2:288486/143‑1 (MQ=255)                                                      ttGCTGATGACGATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACg                                                                                          <  1:768108/143‑1 (MQ=255)                                                        gCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTAAATGAGAAGGCCATTACCGAATTACAGATGGATTTAGCGACAGCCGGAGATACGGt                                                                                        >  2:361963/1‑143 (MQ=255)                                                          tgatgaCTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATATTAGTAATTTTTTGAAAAAATGCAAATGTGTTTGTGTCGTTGCGAAGGCCATTACCGACGTACAGTTCGTTTTGTCTTCAGCCGAACTTActggct                                                                                      >  2:903260/1‑138 (MQ=255)                                                           gatgaCTATCAGTACTCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATACGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGCTACCGtctc                                                                                     >  2:370656/1‑143 (MQ=255)                                                           gatgaCGATCAGGAATCTATAGAAAATTGCGTAACGAAACAGCATGTTAGTAATTGTTTGAAACAATACAAATAAGGCCTGCGCACTGAGAAGGCCAGTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGtctc                                                                                     <  1:507566/143‑1 (MQ=255)                                                           gataaCTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGtctc                                                                                     <  1:400105/143‑1 (MQ=255)                                                             tgaCTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTGTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGGTACGGTCTCCt                                                                                   >  1:403984/1‑143 (MQ=255)                                                                 tATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCaa                                                                               >  1:789614/1‑142 (MQ=255)                                                                 tATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCAATTTGGCTACAGCCGAAGTTACGGTCTCCTTCAc                                                                               >  2:124118/1‑143 (MQ=255)                                                                 tATCAGTAATCTATAGAAAATAGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGGGAAGGCCATTACCGACTTACAGTCCGATTTGGCTACAGCCGCAGTTCCGGTCTCCTTCAc                                                                               >  1:369593/1‑143 (MQ=255)                                                                  aTCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCAcc                                                                              >  2:181245/1‑143 (MQ=255)                                                                   tCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGACTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCa                                                                             >  2:862118/1‑143 (MQ=255)                                                                     aGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCGTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCaaa                                                                           <  1:938265/143‑1 (MQ=255)                                                                        aaTCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAacac                                                                        <  2:705397/143‑1 (MQ=255)                                                                           cTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACttt                                                                     <  2:684877/143‑1 (MQ=255)                                                                              taGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCt                                                                  >  1:1117680/1‑143 (MQ=255)                                                                               agaagaTTGCGTAACGAATCTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGCAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACTAAACACTTTGCtt                                                                 <  2:1028611/143‑1 (MQ=255)                                                                               aGATAATTGCTTATCGAATATGCTTTTTAGTAATTTTTTGCAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCtt                                                                 <  2:417874/143‑1 (MQ=255)                                                                               aGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCtt                                                                 >  1:408464/1‑143 (MQ=255)                                                                                 aaaaTTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTc                                                               >  2:261791/1‑143 (MQ=255)                                                                                   aagtGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAATGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCaa                                                             <  1:580323/140‑1 (MQ=255)                                                                                   aaTTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTcca                                                             >  1:259084/1‑141 (MQ=255)                                                                                        cGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACCTTGCTTTCAACTTTg                                                        <  2:940858/143‑1 (MQ=255)                                                                                            aCGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGTCCTTCTCACTTAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCa                                                    <  1:140669/143‑1 (MQ=255)                                                                                             cGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAg                                                   >  2:320605/1‑143 (MQ=255)                                                                                             cGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAg                                                   <  1:1010477/143‑1 (MQ=255)                                                                                               aaaCTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTAACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGt                                                 >  1:1066838/1‑143 (MQ=255)                                                                                                 aCTGCTTTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAg                                               <  2:111575/143‑1 (MQ=255)                                                                                                         tgaGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCg                                       <  2:1045822/141‑1 (MQ=255)                                                                                                          tAGTAATTTTTTGAAACAATAGTAATTAGGCCTTCTCGCTGAGGAGGCCATTGCCGACTTACAGTTCGAGTTGGCTACAGTCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCgg                                      <  2:1112478/143‑1 (MQ=255)                                                                                                               aTTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTCCGGCCTCCTTCACCAACCACTTTGCTTTCAACTTTGGTCAGGTAGTCCGGTCGGGTTaa                                 >  1:14751/1‑143 (MQ=255)                                                                                                                ttttttGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGATTATAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGTTCAGGTAGTCCAGTCAGGTTCAc                                >  2:731529/1‑143 (MQ=255)                                                                                                                     tGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAgcgc                           <  1:547411/143‑1 (MQ=255)                                                                                                                     cgAAACAAAACAAATAAGGCCTCCTCACCGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAgcgc                           <  1:650233/142‑1 (MQ=255)                                                                                                                       aaaTAATACAAATAAGGCCT‑‑TCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTGCCTCACCAAACACTTTGCTTTCGACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTgg                       <  2:675752/143‑1 (MQ=255)                                                                                                                        aaCAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTTCGGTATCCTTCACCAAACACTTTGATTTAAACTTTGGTAAGGTAGTCCAGTCGGGTTAACAGCGCCTg                        >  1:74007/1‑143 (MQ=255)                                                                                                                        aaCAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTg                        <  2:230367/143‑1 (MQ=255)                                                                                                                           aaTCCAAATATGGCCCTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTa                     <  2:754044/143‑1 (MQ=255)                                                                                                                           aaTACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGCTTTGGCTACAGCCGAAGTTACGGCCTCCCTCACCAACCACAAAGAATCCAACTTTGGCCAGGCCGTCCACTCGGGCCACCAGCGcccgcta                     >  2:328379/1‑138 (MQ=255)                                                                                                                            ctACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAg                    <  2:712471/142‑1 (MQ=255)                                                                                                                            aTACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAg                    <  1:884910/143‑1 (MQ=255)                                                                                                                              aCAAATGAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGtt                  <  1:878416/143‑1 (MQ=255)                                                                                                                                gaaTAAGGTCTTCTCACTGGGAAGTCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTct                <  2:758825/142‑1 (MQ=255)                                                                                                                                   tAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTctgct             <  1:1082987/143‑1 (MQ=255)                                                                                                                                    aaGGCCTTCTCACTGAGAGGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTctgctg            <  1:502516/143‑1 (MQ=255)                                                                                                                                    aaGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTctgctg            <  1:955171/143‑1 (MQ=255)                                                                                                                                     aGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTgg           >  2:43153/1‑143 (MQ=255)                                                                                                                                         cTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGGAAGt       >  1:841539/1‑143 (MQ=255)                                                                                                                                           tctcACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGGAAGTCa     <  1:757392/143‑1 (MQ=255)                                                                                                                                              cACTGAGAAGGCTATTACCGACTTACAGTTCGGTTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGAGTTAACGGCGCCTGGTAGTTCTGCTGGAAGTCAGTa  <  2:338494/143‑1 (MQ=255)                                                                                                                                               |                                                                                                                                              GCAGGATGCTGTTGCTACCGCTGAAAATGCAGAAACGTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGGAAGTCAGTA  >  NC_000913/292159‑292442

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.