New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 29230177 (1.260)5 (0.090) 5/264 7.6 6.4% intergenic (+70/+21) yagJ/yagK CP4‑6 prophage; uncharacterized protein;Phage or Prophage Related/CP4‑6 prophage; conserved protein
?NC_000913 = 292302 75 (1.320)intergenic (+71/+20) yagJ/yagK CP4‑6 prophage; uncharacterized protein;Phage or Prophage Related/CP4‑6 prophage; conserved protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CTGTTGCTACCGCTGAAAATGCAGAAACGTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGGAAGTCAGTA  >  NC_000913/292167‑292442
                                                                                                                                       |                                                                                                                                            
cggtgtcTACCGCTGAAAATGCAGAAACGTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAg                                                                                                                                       <  1:243692/137‑1 (MQ=255)
cTGTTGCTACCGTTGAAATTGCATAAACTTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAg                                                                                                                                       <  1:133585/143‑1 (MQ=255)
      cTACCGCTGAAAATGCAGAAACGTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCAtt                                                                                                                                 <  1:777649/143‑1 (MQ=255)
       tACCGCTGAAAATGCAGAAACGTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTa                                                                                                                                >  2:1082987/1‑143 (MQ=255)
       tACCGCTGAAAATGCAGAAACGTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTa                                                                                                                                >  1:230367/1‑143 (MQ=255)
            cTGAAAATGCAGAAACGTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGAc                                                                                                                           >  2:404515/1‑143 (MQ=255)
             tGAAAATGCAGAAACGTTAGTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACt                                                                                                                          <  1:169180/143‑1 (MQ=255)
               aaaaTGCAGAAACGTTATTTAGTAGCGGACTTGCTGATGCATCTACGCAGACTTAAGAAAAGTGTGTCGAGATGTCACACGCGAGTAATTTTTTGCAACAATACAAATAAGGCCTTCTCACTGAGACGGCCCTTACGGACCTa                                                                                                                        >  1:1112478/1‑143 (MQ=255)
               aaaaTGCAGAAACGTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTa                                                                                                                        >  2:556421/1‑143 (MQ=255)
                aaaTGTATAAATGTTCTTTAGTAGCGGACTTGCTGATGATTATCAGTAATTTATAGAAAATTGCGTAACTAATCTGCATTTTATTAATTTTTTGAAACAATACAAATAAGTCCTTCTCACTGAGAAGGCTATTACCGACTTAc                                                                                                                       <  2:634510/143‑1 (MQ=255)
                 aaTGCAGAAACGTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAGTACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACa                                                                                                                      >  1:1103852/1‑143 (MQ=255)
                 aaTGCAGAAACGTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACa                                                                                                                      <  1:134647/143‑1 (MQ=255)
                   tGCAGAAACGTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTTTAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCAATGAGAAGGCCATTACCGACTTACAGt                                                                                                                    >  2:814997/1‑143 (MQ=255)
                   tGCAGAAACGTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGt                                                                                                                    >  1:798952/1‑143 (MQ=255)
                       gAAACGTTATTCTGTAGGGGACTTGCTGATGACTATCAGTAATCTATAGAAAAATGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGa                                                                                                                <  2:592102/143‑1 (MQ=255)
                          aCGTTATTTAGTAGCGGACTTGCTGATGACTATCAGAAAAACATAGTAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGAttt                                                                                                             >  1:763134/1‑143 (MQ=255)
                           cGTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAATGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTg                                                                                                            <  1:638269/143‑1 (MQ=255)
                            gTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCCCTGAGAAGGCCATTACCGACATACAGTTCGATTTgg                                                                                                           >  2:24693/1‑143 (MQ=255)
                            gTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTgg                                                                                                           <  1:367857/143‑1 (MQ=255)
                             tgaTTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAAGTGCGTAACGCAACTGCATGTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGCATGACAGTTCGATTTGGc                                                                                                          >  2:65669/3‑143 (MQ=255)
                                 ttAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACa                                                                                                      <  2:414274/143‑1 (MQ=255)
                                    gtagCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTTCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCAATGAGAAGTCCATTACCGACTTACAGTTCGATTTGGCTACAGcc                                                                                                   <  2:340407/143‑1 (MQ=255)
                                       gCGGACTTGCTGATGACTATCAGTAATCTATATAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGaa                                                                                                >  2:581731/1‑143 (MQ=255)
                                       gCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGaa                                                                                                >  1:940858/1‑143 (MQ=255)
                                         ggACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTTCAGTTCGATTTTGCTACAGCCGAAGt                                                                                              >  1:137926/1‑143 (MQ=255)
                                          gACGTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGtt                                                                                             <  2:734500/143‑1 (MQ=255)
                                             ttgttgATGATTATTAGTAATCTCTAGATAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAATTAAGGCCTTCTCACTGATAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACg                                                                                          <  2:288486/143‑1 (MQ=255)
                                             ttGCTGATGACGATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACg                                                                                          <  1:768108/143‑1 (MQ=255)
                                               gCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTAAATGAGAAGGCCATTACCGAATTACAGATGGATTTAGCGACAGCCGGAGATACGGt                                                                                        >  2:361963/1‑143 (MQ=255)
                                                 tgatgaCTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATATTAGTAATTTTTTGAAAAAATGCAAATGTGTTTGTGTCGTTGCGAAGGCCATTACCGACGTACAGTTCGTTTTGTCTTCAGCCGAACTTActggct                                                                                      >  2:903260/1‑138 (MQ=255)
                                                  gatgaCTATCAGTACTCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATACGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGCTACCGtctc                                                                                     >  2:370656/1‑143 (MQ=255)
                                                  gatgaCGATCAGGAATCTATAGAAAATTGCGTAACGAAACAGCATGTTAGTAATTGTTTGAAACAATACAAATAAGGCCTGCGCACTGAGAAGGCCAGTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGtctc                                                                                     <  1:507566/143‑1 (MQ=255)
                                                  gataaCTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGtctc                                                                                     <  1:400105/143‑1 (MQ=255)
                                                    tgaCTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTGTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGGTACGGTCTCCt                                                                                   >  1:403984/1‑143 (MQ=255)
                                                        tATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCaa                                                                               >  1:789614/1‑142 (MQ=255)
                                                        tATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCAATTTGGCTACAGCCGAAGTTACGGTCTCCTTCAc                                                                               >  2:124118/1‑143 (MQ=255)
                                                        tATCAGTAATCTATAGAAAATAGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGGGAAGGCCATTACCGACTTACAGTCCGATTTGGCTACAGCCGCAGTTCCGGTCTCCTTCAc                                                                               >  1:369593/1‑143 (MQ=255)
                                                         aTCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCAcc                                                                              >  2:181245/1‑143 (MQ=255)
                                                          tCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGACTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCa                                                                             >  2:862118/1‑143 (MQ=255)
                                                            aGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCGTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCaaa                                                                           <  1:938265/143‑1 (MQ=255)
                                                               aaTCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAacac                                                                        <  2:705397/143‑1 (MQ=255)
                                                                  cTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACttt                                                                     <  2:684877/143‑1 (MQ=255)
                                                                     taGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCt                                                                  >  1:1117680/1‑143 (MQ=255)
                                                                      agaagaTTGCGTAACGAATCTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGCAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACTAAACACTTTGCtt                                                                 <  2:1028611/143‑1 (MQ=255)
                                                                      aGATAATTGCTTATCGAATATGCTTTTTAGTAATTTTTTGCAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCtt                                                                 <  2:417874/143‑1 (MQ=255)
                                                                      aGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCtt                                                                 >  1:408464/1‑143 (MQ=255)
                                                                        aaaaTTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTc                                                               >  2:261791/1‑143 (MQ=255)
                                                                          aagtGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAATGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCaa                                                             <  1:580323/140‑1 (MQ=255)
                                                                          aaTTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTcca                                                             >  1:259084/1‑141 (MQ=255)
                                                                               cGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACCTTGCTTTCAACTTTg                                                        <  2:940858/143‑1 (MQ=255)
                                                                                   aCGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGTCCTTCTCACTTAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCa                                                    <  1:140669/143‑1 (MQ=255)
                                                                                    cGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAg                                                   >  2:320605/1‑143 (MQ=255)
                                                                                    cGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAg                                                   <  1:1010477/143‑1 (MQ=255)
                                                                                      aaaCTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTAACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGt                                                 >  1:1066838/1‑143 (MQ=255)
                                                                                        aCTGCTTTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAg                                               <  2:111575/143‑1 (MQ=255)
                                                                                                tgaGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCg                                       <  2:1045822/141‑1 (MQ=255)
                                                                                                 tAGTAATTTTTTGAAACAATAGTAATTAGGCCTTCTCGCTGAGGAGGCCATTGCCGACTTACAGTTCGAGTTGGCTACAGTCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCgg                                      <  2:1112478/143‑1 (MQ=255)
                                                                                                      aTTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTCCGGCCTCCTTCACCAACCACTTTGCTTTCAACTTTGGTCAGGTAGTCCGGTCGGGTTaa                                 >  1:14751/1‑143 (MQ=255)
                                                                                                       ttttttGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGATTATAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGTTCAGGTAGTCCAGTCAGGTTCAc                                >  2:731529/1‑143 (MQ=255)
                                                                                                            tGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAgcgc                           <  1:547411/143‑1 (MQ=255)
                                                                                                            cgAAACAAAACAAATAAGGCCTCCTCACCGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAgcgc                           <  1:650233/142‑1 (MQ=255)
                                                                                                              aaaTAATACAAATAAGGCCT‑‑TCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTGCCTCACCAAACACTTTGCTTTCGACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTgg                       <  2:675752/143‑1 (MQ=255)
                                                                                                               aaCAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTTCGGTATCCTTCACCAAACACTTTGATTTAAACTTTGGTAAGGTAGTCCAGTCGGGTTAACAGCGCCTg                        >  1:74007/1‑143 (MQ=255)
                                                                                                               aaCAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTg                        <  2:230367/143‑1 (MQ=255)
                                                                                                                  aaTCCAAATATGGCCCTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTa                     <  2:754044/143‑1 (MQ=255)
                                                                                                                  aaTACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGCTTTGGCTACAGCCGAAGTTACGGCCTCCCTCACCAACCACAAAGAATCCAACTTTGGCCAGGCCGTCCACTCGGGCCACCAGCGcccgcta                     >  2:328379/1‑138 (MQ=255)
                                                                                                                   ctACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAg                    <  2:712471/142‑1 (MQ=255)
                                                                                                                   aTACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAg                    <  1:884910/143‑1 (MQ=255)
                                                                                                                     aCAAATGAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGtt                  <  1:878416/143‑1 (MQ=255)
                                                                                                                       gaaTAAGGTCTTCTCACTGGGAAGTCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTct                <  2:758825/142‑1 (MQ=255)
                                                                                                                          tAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTctgct             <  1:1082987/143‑1 (MQ=255)
                                                                                                                           aaGGCCTTCTCACTGAGAGGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTctgctg            <  1:502516/143‑1 (MQ=255)
                                                                                                                           aaGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTctgctg            <  1:955171/143‑1 (MQ=255)
                                                                                                                            aGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTgg           >  2:43153/1‑143 (MQ=255)
                                                                                                                                cTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGGAAGt       >  1:841539/1‑143 (MQ=255)
                                                                                                                                  tctcACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGGAAGTCa     <  1:757392/143‑1 (MQ=255)
                                                                                                                                     cACTGAGAAGGCTATTACCGACTTACAGTTCGGTTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGAGTTAACGGCGCCTGGTAGTTCTGCTGGAAGTCAGTa  <  2:338494/143‑1 (MQ=255)
                                                                                                                                       |                                                                                                                                            
CTGTTGCTACCGCTGAAAATGCAGAAACGTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGGAAGTCAGTA  >  NC_000913/292167‑292442

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.