Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	NC_000913	3,815,859	Δ82 bp		[rph]–[rph]	[rph], [rph]

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	3815859	3815940	82	65 [0]	[0] 64	[rph]–[rph]	[rph],[rph]

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3815858	0 (0.000)	60 (1.060)	46/264	0.2	100%	pseudogene (24/48 nt)	rph	ribonuclease PH (defective);enzyme; Degradation of RNA; RNase PH
	?	NC_000913	3815941 =	0 (0.000)					pseudogene (609/669 nt)	rph	ribonuclease PH (defective);enzyme; Degradation of RNA; RNase PH

ACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTC  >  NC_000913/3815717‑3816000                                                                                                                                              |                                                                                                                                               acgcctgcTTGCTAAGCGCAAATTCAACACACTGGCGCTGATATGGTGTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAACGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTCCTGCc                                                                                                                                               <  1:152423‑M1/140‑2 (MQ=255) acacCTGCTTGCTAAGCGCAAATGCAAGACACTGGCGCTGCGATGGTTGCATGCCTTCGCTGATTCTGCTGCGTGCCCACAGCGCTGCGTTAGGGTAGTTATTAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGcc                                                                                                                                               <  1:1111805/143‑2 (MQ=255) acacCTGCTTGCTAAACGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGGCACCGCCGCCTTCTGCc                                                                                                                                               >  2:797662‑M1/1‑142 (MQ=255)   acCTGCTTGCGAAGCGACAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAACAGGCGCCTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgt                                                                                                                                             <  2:456741‑M1/143‑4 (MQ=255)      tgcttgctAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAATGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtccc                                                                                                                                          <  1:701215‑M1/143‑7 (MQ=255)           gctAATCGCAAATTCGATAAGTTGGTGCTGTTATGTTTTCATGTCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGCCTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgca                                                                                                                                     <  2:1100642‑M1/143‑12 (MQ=255)           gctAAGCGGAAAGTCAATAGGCTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgca                                                                                                                                     <  1:29775‑M1/143‑12 (MQ=255)            ctAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGCCTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcac                                                                                                                                    >  2:435830‑M1/1‑131 (MQ=255)            ctAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcac                                                                                                                                    >  1:590974‑M1/1‑131 (MQ=255)              aaGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcactt                                                                                                                                  <  1:496543‑M1/143‑15 (MQ=255)                gcgcAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTAACTACAGACACAAAAAAGGCGACTCATCAGTCGCCTTTAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcactcca                                                                                                                                >  1:42165‑M1/1‑127 (MQ=255)                 cgcAAAGTCAATAAACGGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaa                                                                                                                               <  2:300060‑M1/143‑18 (MQ=255)                  gcAAATTTAATAAACGTGCGCGGATATGATTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaat                                                                                                                              <  2:908429‑M1/143‑19 (MQ=255)                  gcAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaat                                                                                                                              >  1:883491‑M1/1‑125 (MQ=255)                    aaaTTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCCTCTGCcgccccctgaacttcactga                                                                                                                            >  2:275077‑M1/1‑123 (MQ=255)                     aaTTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgat                                                                                                                           <  1:484623‑M1/143‑22 (MQ=255)                       ttCAATAAGCTTTCGCTGATATAGTTTCATGCCTTCGCTCCTCATCTTACTGTTCAACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgc                                                                                                                         <  1:357318‑M1/143‑24 (MQ=255)                          aaTAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGTCAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTATGCcgtcccctgcacctcaatgatgcgcc                                                                                                                      >  2:416571‑M1/1‑117 (MQ=255)                           aTAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCATCTACcgtaccctgaacttcaatgaagcgccc                                                                                                                     >  1:1055074‑M1/1‑116 (MQ=255)                                 tGGCGCTGATATGGTTTCATGCCTTCGCGCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttc                                                                                                               <  2:687208‑M1/143‑34 (MQ=255)                                 tGGCGCTGATATGGTGTCATGCCTTCGCTCCTCATCTTACTTTTCTTCAGAC‑AAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcg                                                                                                              <  1:1020249‑M1/143‑35 (MQ=255)                                  ggCGCTGGTATGGTTTCATGCCTTCGCTCCTCGTCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGTCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcg                                                                                                              <  2:888819‑M1/143‑35 (MQ=255)                                  ggCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcg                                                                                                              <  2:96640‑M1/143‑35 (MQ=255)                                  ggCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACGTTTCTACAGACAAGAACAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcg                                                                                                              <  2:393057‑M1/143‑35 (MQ=255)                                   gcgcTGTTTTGTTTTCATTCCTTCGCTCGTCATCTTTCTTGTCTACGGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAACATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcgg                                                                                                             <  2:930718‑M1/143‑36 (MQ=255)                                    cgcTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTATAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggt                                                                                                            <  1:231875‑M1/143‑37 (MQ=255)                                    cgcTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggt                                                                                                            <  2:590974‑M1/143‑37 (MQ=255)                                        gATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatc                                                                                                        >  1:526619‑M1/1‑103 (MQ=255)                                         atatGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatca                                                                                                       <  1:366817‑M1/143‑42 (MQ=255)                                           atGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcact                                                                                                     >  2:556395‑M1/1‑100 (MQ=255)                                              gTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacg                                                                                                  >  1:1097789‑M1/1‑97 (MQ=255)                                              gTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacg                                                                                                  >  2:711715‑M1/1‑97 (MQ=255)                                                    tGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatg                                                                                            <  2:23328‑M1/143‑53 (MQ=255)                                                     gCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgt                                                                                           >  1:900351‑M1/1‑90 (MQ=255)                                                     gCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATAAGATAGACAGCACCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcataactaggtacgagt                                                                                           >  1:291511‑M1/1‑90 (MQ=255)                                                        ttCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcgg                                                                                        >  2:188932‑M1/1‑87 (MQ=255)                                                               ctcATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgc                                                                                 <  1:881327‑M1/143‑64 (MQ=255)                                                                     tttctttTCTACACAAAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcaga                                                                           <  1:457508‑M1/140‑70 (MQ=255)                                                                     ttACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcaga                                                                           <  2:261075‑M1/143‑70 (MQ=255)                                                                       aCTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcgttctctgcggcagagt                                                                         >  1:652979‑M1/1‑72 (MQ=255)                                                                         ttttCTACAGACAAAAAAAAGGCGACTCATCCGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatccctacgttcatctctgtacctgcggcagcgtct                                                                       >  1:643620‑M1/1‑70 (MQ=255)                                                                         ttttCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatccctacgttcacgtcggtctccgcggcagagtct                                                                       >  2:957546‑M1/1‑70 (MQ=255)                                                                         ttttCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtct                                                                       >  1:53368‑M1/1‑70 (MQ=255)                                                                         ttttCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcactgcaatgatgcgcccgtcttcagtcatcactacgttcatgtcggtctctgcggcagagtct                                                                       >  1:379051‑M1/1‑70 (MQ=255)                                                                            tCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatcttgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttca                                                                    <  1:207752‑M1/143‑77 (MQ=255)                                                                              tACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcagtctcttctgccgagtcttcaac                                                                  >  1:375492‑M1/1‑65 (MQ=255)                                                                               aCAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgctcttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctccgcggccgagtcttccacg                                                                 >  1:697962‑M1/1‑64 (MQ=255)                                                                               aCAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtaggtctctccggcagagtcttcaacg                                                                 >  2:496816‑M1/1‑64 (MQ=255)                                                                                cAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcgggcatcactacgttcatgtcggtctctgcggcagcgcatccaacgt                                                                >  2:453881‑M1/1‑63 (MQ=255)                                                                                   aCAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTTCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagcgtcttcaacgtatt                                                             >  2:551846‑M1/1‑60 (MQ=255)                                                                                         aaaaGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcctcactacgttcatgtcggtctctgcggcagagtcttcaacgtcttccagat                                                       >  1:609725‑M1/1‑54 (MQ=255)                                                                                           cgggcggcccATCAGTCGCCCTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcggcccctgcacttcaatgatgcgcccgtctgcggtcatcactacgttcatgtcgctctctgcggcagagtcttcaacgtattccagatcg                                                     <  2:947769‑M1/141‑92 (MQ=255)                                                                                            aGGCGACTGATGAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgccgcagagtcttcaacgtattccaaatagc                                                    >  1:675723‑M1/1‑51 (MQ=255)                                                                                            aGGCGACTGATGAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcgggcatcactacgttcatgtcggtctctgcggcagagccttcaacgtattccagatcgc                                                    >  1:357838‑M1/1‑51 (MQ=255)                                                                                               cttgttatctgtcgccTTAAAAATCAGTTTGCCAGCGCCGCCTCCTGCagtcccctgcacctcaaggatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaa                                                 <  1:736764‑M1/137‑96 (MQ=255)                                                                                                 acgcagcagtcgccTTAAAAATCAGTGTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaacc                                               <  1:104535‑M1/137‑98 (MQ=255)                                                                                                                    aaacagtGTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcactgatgcgcccgtcttcggtcatcacaacgttcatgtcggtctctgcggcagagtcttcaacgtattccagctcgcaaaccgcttcgccgttcacaattc                            <  1:377030‑M1/140‑117 (MQ=255)                                                                                                                    aaTCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatctcggtctctgcggcagagtcctcaacgtaatccagatcgcaaaccgcttcgccgttcacaactc                            >  2:897701‑M1/1‑27 (MQ=255)                                                                                                                                 gcgcCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcgggctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgccgttgaccgttccgacagaaactgc               >  1:199738‑M1/1‑14 (MQ=255)                                                                                                                                 gcgcCGCCATCTGCcgtccccggcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgccgttcacaattccgacagaaactgc               <  1:188601‑M1/143‑130 (MQ=255)                                                                                                                                    ccgccTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagaggcttcaacgtattccagatcgcaaaccgcttcgccgttcccaattccgacacagaccgcggc            >  2:357563‑M1/1‑11 (MQ=255)                                                                                                                                     cgccTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgccgttcacaattccgacagaaactgcggct           <  1:852183‑M1/143‑134 (MQ=255)                                                                                                                                     cgccTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgccgtccacaattccggcagaaaccgcggct           >  1:24640‑M1/1‑10 (MQ=255)                                                                                                                                         ttCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgccgttcacaattccgacagaaactgcggctacca       <  2:197804‑M1/143‑138 (MQ=255)                                                                                                                                              ccgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgccgttcacaattccgacagaaactgcggctaccatccct  <  2:33910‑M1/143‑143 (MQ=255)                                                                                                                                              |                                                                                                                                               ACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTC  >  NC_000913/3815717‑3816000

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑