Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	NC_000913	3,815,859	Δ82 bp		[rph]–[rph]	[rph], [rph]

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	3815859	3815940	82	68 [0]	[0] 69	[rph]–[rph]	[rph],[rph]

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3815858	0 (0.000)	67 (1.130)	60/264	0.0	100%	pseudogene (24/48 nt)	rph	ribonuclease PH (defective);enzyme; Degradation of RNA; RNase PH
	?	NC_000913	3815941 =	0 (0.000)					pseudogene (609/669 nt)	rph	ribonuclease PH (defective);enzyme; Degradation of RNA; RNase PH

CAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTT  >  NC_000913/3815800‑3816083                                                                                                                                              |                                                                                                                                               cacctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatccgtcgccttaaaaatcagtttgccctcgccgccgtctgcCg                                                                                                                                               >  1:862928‑M2/142‑143 (MQ=255)   cctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTc                                                                                                                                             >  1:410766‑M2/140‑143 (MQ=255)     tgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTccc                                                                                                                                           <  1:801222‑M2/6‑1 (MQ=255)     tgcttgcgaagcgcaaattcaataacctggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaagaaaggcgtctcatcagtcgccttaaaaagcagtttgccagcgccgccttctgcCGTccc                                                                                                                                           <  1:701385‑M2/6‑1 (MQ=255)       cttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccgtaaaaatcagtttgccagcgccgccttctgcCGTCCCCt                                                                                                                                         >  1:802667‑M2/136‑143 (MQ=255)          gctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCa                                                                                                                                      <  1:691771‑M2/11‑1 (MQ=255)            taagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACt                                                                                                                                    >  1:290588‑M2/131‑143 (MQ=255)               tcgcaagtccaataaacgtgcgctgatatggcttcatgccatcgctactgttgtgacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCa                                                                                                                                 <  2:1119434‑M2/16‑1 (MQ=255)                cgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCaa                                                                                                                                >  2:912809‑M2/127‑143 (MQ=255)                cgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctaaagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagttggccaccgcagccttctgcCGTCACATGCCCTCCaa                                                                                                                                >  1:95497‑M2/127‑143 (MQ=255)                  cacattcaataaacaagcggtgagatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAatg                                                                                                                              <  1:474834‑M2/19‑1 (MQ=255)                    aattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaacgcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAatgat                                                                                                                            <  2:258713‑M2/21‑1 (MQ=255)                        caatacactggcgctggtatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATgcgc                                                                                                                        <  2:1077159‑M2/25‑1 (MQ=255)                        caataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATgcgc                                                                                                                        <  1:949477‑M2/25‑1 (MQ=255)                                 ggcgctgatatggtttcctgccttccctcctcatcttactttgctacaaacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCg                                                                                                               <  1:156900‑M2/34‑1 (MQ=255)                                 ggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACCTCCATGATGCGCCCGTCTTCg                                                                                                               >  2:86163‑M2/110‑143 (MQ=255)                                        atatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGtcatca                                                                                                        <  2:936358‑M2/41‑1 (MQ=255)                                          atggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgcctcatcaggcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCACGTCTTCGGTCACCACt                                                                                                      >  2:712683‑M2/101‑143 (MQ=255)                                            ggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGGCACCACTAc                                                                                                    >  1:179538‑M2/99‑143 (MQ=255)                                             tttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCCTCACTACg                                                                                                   >  1:751628‑M2/98‑143 (MQ=255)                                             gtgtcatgccttctcccctcatcttagtttcctacagacaaaaacaaggcgactcatcagtcgccttaaaaagcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACg                                                                                                   <  1:861603‑M2/46‑1 (MQ=255)                                               ttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTACCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTAAGtt                                                                                                 >  1:302512‑M2/96‑143 (MQ=255)                                               ttcatgccctcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtgtgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGtt                                                                                                 <  1:1108491‑M2/48‑1 (MQ=255)                                                tcatgccttcgctcctcatctcacttttctacagaaaaaaaaaaggagtctcttgcaccgcctgaaaactcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTc                                                                                                <  1:530890‑M2/49‑1 (MQ=255)                                                 catgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTGCa                                                                                               >  1:63934‑M2/94‑143 (MQ=255)                                                   tgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGACGCGCCCGTCTGCGGTCATCACTCCGTCCatc                                                                                             >  1:473645‑M2/92‑142 (MQ=255)                                                      ccttcgctcctcatcttccttttctacagccaaaaacaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGTGCCCGTCTTCGGTCATCACTACGTTCATGTCg                                                                                          <  2:605122‑M2/55‑1 (MQ=255)                                                        tcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGt                                                                                        <  1:559637‑M2/57‑1 (MQ=255)                                                          gctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCCCTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGtct                                                                                      >  1:925990‑M2/85‑143 (MQ=255)                                                             gctcttcgtattttcctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTg                                                                                   <  2:330434‑M2/62‑1 (MQ=255)                                                              ctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgctttctacCGTCCCCTGCACTTCAATGATGCTCCCGTCTTCGGTCATCACTACGTTAATTTCGGTCTCTGc                                                                                  >  1:442911‑M2/81‑143 (MQ=255)                                                                 atcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGCCTTCGGTCATCACTACCTTCCTGTCGGTCTCTgcgtc                                                                               >  1:759488‑M2/78‑141 (MQ=255)                                                                      acttatctacagacaaaaaaaaggcgacgcatcagtcgccttaacaatcagtttgccagcgccgccttctgcCGTCCCCTGCACCTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGt                                                                          <  1:258956‑M2/71‑1 (MQ=255)                                                                         tttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttcggcCGTCCCCTGCACTTCAATGATGCGCCCGGCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCtt                                                                       <  2:118182‑M2/74‑1 (MQ=255)                                                                            ctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatccgtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCCTCGGTCATCACTACGTTCATGTCGGTCTCTCCGGCAGAgtcttaca                                                                    >  2:1092727‑M2/67‑140 (MQ=255)                                                                            ctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCaa                                                                    <  1:1038588‑M2/77‑1 (MQ=255)                                                                             tccaggcaaaaaataggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAAc                                                                   <  2:478835‑M2/78‑1 (MQ=255)                                                                              acagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGGCTTAAACg                                                                  >  1:444582‑M2/65‑143 (MQ=255)                                                                                 gacaaaaaaaaggcgactcatcaggcgcctcaaaaatcagtttgccagcgcccccttcctcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCAATACGTTCATGGCGGGCTCTGCGGCAGAGTCTTCAACGTAt                                                               <  2:565812‑M2/82‑1 (MQ=255)                                                                                   caaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTc                                                             <  1:912809‑M2/84‑1 (MQ=255)                                                                                    aaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTGCGACGTATTcc                                                            >  2:1089151‑M2/59‑143 (MQ=255)                                                                                     aaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCCACGTATTCCa                                                           >  1:1011243‑M2/58‑143 (MQ=255)                                                                                       aaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGGGGCTTCAACGTAGTCCAGa                                                         >  1:808410‑M2/56‑143 (MQ=255)                                                                                            ggcgactgatgagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCa                                                    >  1:943491‑M2/51‑143 (MQ=255)                                                                                             gcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCaa                                                   >  1:91358‑M2/50‑143 (MQ=255)                                                                                              cgccccatccgtcgccttaaaaatcagttggccagcgccgccttctgcCGTCCCCTGCCCTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCaaa                                                  <  1:104479‑M2/95‑1 (MQ=255)                                                                                              cgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCaaa                                                  <  1:326087‑M2/95‑1 (MQ=255)                                                                                              cgacccatcaggcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCaaa                                                  <  2:444742‑M2/95‑1 (MQ=255)                                                                                               gactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCCCTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTGTTCCAGATCgcaacc                                                 >  2:454765‑M2/48‑141 (MQ=255)                                                                                                   catcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGCTCGCAAACCGCt                                             >  2:53394‑M2/44‑143 (MQ=255)                                                                                                    atcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTTCGGCAGCGTCTTCAACGTATTCCAGATCGCAAACCGCtt                                            >  1:1104893‑M2/43‑143 (MQ=255)                                                                                                        gtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGcc                                        >  2:1027192‑M2/39‑143 (MQ=255)                                                                                                        gtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGcc                                        <  1:118140‑M2/105‑1 (MQ=255)                                                                                                              ttacacatcagtttgcccgcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTcac                                  <  2:728032‑M2/111‑1 (MQ=255)                                                                                                              ttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCCTCACTACGTCCATGCCGGTCTCTGCGGCAGAGTCCTCGACGCATGACGGCTCGCAAGCCGCGTCGCCGTCcac                                  >  2:169026‑M2/33‑143 (MQ=255)                                                                                                               taaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTCTTCCAGATCGCAAACCGCTTCGCCGTTccca                                 >  2:1072385‑M2/32‑143 (MQ=255)                                                                                                                aaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACaa                                >  1:723256‑M2/31‑143 (MQ=255)                                                                                                                   aatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTGGGTCATCACTACGTTCATTTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTc                             <  1:824853‑M2/116‑1 (MQ=255)                                                                                                                   aatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTc                             >  1:671758‑M2/28‑143 (MQ=255)                                                                                                                     tcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCCCCGTTCCCAATCCCg                           >  2:692808‑M2/26‑143 (MQ=255)                                                                                                                      cagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATATCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGa                          <  2:576324‑M2/119‑1 (MQ=255)                                                                                                                      caggttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGa                          <  1:338060‑M2/119‑1 (MQ=255)                                                                                                                         tttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCAAGATCGCAAACCGCTTCGCCGTTCGCAATTCCCACAg                       >  2:83340‑M2/22‑143 (MQ=255)                                                                                                                           tgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCCCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGaa                     <  1:836788‑M2/124‑1 (MQ=255)                                                                                                                             ccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCCGCTCCTAAACCGCTTCGCCGTTCACAATTCCCACagaacc                   >  2:810466‑M2/18‑141 (MQ=255)                                                                                                                             ccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGCCATCACTACGTTCATGTCGGTCTCTGCCGCAGAGTCTTCAACGCATTCCAGATCGCACACCGCTCCGCCGTTCACCACTCCGAcagaccc                   >  2:376024‑M2/18‑140 (MQ=255)                                                                                                                                  gccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACCCTTCCGACAGCACCTGCgg              >  1:475025‑M2/13‑143 (MQ=255)                                                                                                                                    cgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAGTTCCGACAGAAACTGCGgcc            >  1:407343‑M2/11‑142 (MQ=255)                                                                                                                                              cGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCtt  <  1:433780/143‑1 (MQ=255)                                                                                                                                              |                                                                                                                                               CAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTT  >  NC_000913/3815800‑3816083

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑