| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 1,979,486 | IS5 (+) +4 bp | intergenic (‑271/‑264) | insA ← / → uspC | IS1 repressor TnpA/universal stress protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1979486 = | 0 (0.000) | 63 (1.470) | 42/284 | 0.1 | 100% | intergenic (‑271/‑267) | insA/uspC | IS1 repressor TnpA/universal stress protein |
| ? | NC_000913 | 2101749 = | NA (NA) | noncoding (1195/1195 nt) | IS5 | repeat region | |||||
| * | ? | NC_000913 | = 1979489 | 0 (0.000) | 51 (1.190) | 35/284 | 0.2 | 100% | intergenic (‑274/‑264) | insA/uspC | IS1 repressor TnpA/universal stress protein |
| ? | NC_000913 | = 2290113 | NA (NA) | noncoding (1/1195 nt) | IS5 | repeat region | |||||
Only 100 of 103 total aligned reads displayed.
GCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCGGGAGTG > NC_000913/1979344‑1979624 | tggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccc > 2:613825‑M1/143‑143 (MQ=255)tggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccc < 2:216478‑M1/1‑1 (MQ=255)tggggataacgcctgaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccc > 2:535776‑M1/143‑143 (MQ=255) ggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCt > 1:19940‑M1/142‑143 (MQ=255) ggggagaacgccttaaagggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaagatcggctaagacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCt > 2:195427‑M1/142‑143 (MQ=255) gggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattctaaccttcgCTa < 2:642046‑M1/3‑1 (MQ=255) gggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTa < 1:614238‑M1/3‑1 (MQ=255) ggatcacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTaa > 1:370113‑M1/140‑143 (MQ=255) ggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttcctcgcttattcgcaacttcaCTaa < 2:404226‑M1/4‑1 (MQ=255) ggagaacgcctgaaacgacgacgaaacgggcgacataggctgagtcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTaa > 1:440758‑M1/140‑143 (MQ=255) aaaaTGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTaa < 1:33003/143‑1 (MQ=255) ggtggcgccttaaagggcggagaagcggtctaaataggctgattcgaggcatttacgggagaaaaaatcggcgcaaacatgaagaaatgaaatgactgagtcagccgagaagaattgccccgcttattcgcaccttccCTAAt > 2:134750‑M1/139‑143 (MQ=255) gataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccctacc < 1:55852‑M1/5‑3 (MQ=255) gataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAt < 1:184525‑M1/5‑1 (MQ=255) ataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAtt > 2:163245‑M1/138‑143 (MQ=255) ataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAtt > 1:380564‑M1/138‑143 (MQ=255) ataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaattcccccggttattcgcaacttccCTAAtt < 2:739447‑M1/6‑1 (MQ=255) acctgcctaattggcgaagaaacggtctaaataggctggttcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTaa > 2:668145‑M1/136‑143 (MQ=255) acgccttaaatggcgaagaaacggtctaaataggctgattcaaggcattcacgggagaaaaaatcggctcaaataagaagaaatgaaatggacgaaacagccgagaagaatttcccagctaattcgcaccctccCTAATTaaa < 2:760735‑M1/9‑1 (MQ=255) gccttaactggcgaagaagcggtctacataggctgagtcaaggcatttacgggagaaaacatcggctcaaacatgaagcaatgaaattactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATa > 2:414243‑M1/133‑143 (MQ=255) gccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaaaatgaagaaatgaaatgacggagtcagccgagaagaatttccccgcgtattcgcaccttccctaagtgaggc < 1:108455‑M1/11‑8 (MQ=255) aaCAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACCACAAACTAAggaaggt > 1:308035‑M1/1‑136 (MQ=255) aaCAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggt < 1:379796‑M1/143‑8 (MQ=255) aatgacaaagaaacggcatcaaaatgctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACaaaga > 1:732836‑M1/127‑143 (MQ=255) tggggcagaaacggtctcaataggctgattcaaggaatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACaaagaaa > 2:473672‑M1/125‑143 (MQ=255) taatCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaa < 2:396018‑M1/143‑16 (MQ=255) gaagaaacggtctaaataggctgattcaaggcatttacgggagcaaaaatcggctccaacatgaacaaattaaatgactcagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAacacaaagaaacgcc < 2:513928‑M1/23‑5 (MQ=255) cGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggagggtgcgaacaagtcc > 2:449045‑M1/1‑124 (MQ=255) aagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGcaa > 1:478791‑M1/120‑143 (MQ=255) tGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgat < 1:671935‑M1/143‑25 (MQ=255) tGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGCCCCTTACCGCACCACATACTGCggaaggtgcgaacaataccctgatatgag > 1:90882‑M1/1‑114 (MQ=255) taaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcgCTAATTAAATACAAAGAAAGGCAACAATCAACtta < 1:93262‑M1/35‑1 (MQ=255) taaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACtta > 2:724218‑M1/109‑143 (MQ=255) ctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagcatttccccgcttattcgaccttccCTAATTAAATACAAAGAAAGGCAACAGTCAActtc < 1:577779‑M1/35‑2 (MQ=255) aaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACttaa > 2:534024‑M1/108‑143 (MQ=255) aataggctaattcaagtcattcacggtagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACttaat > 1:754587‑M1/107‑143 (MQ=255) cacaGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgt > 1:307342‑M1/1‑107 (MQ=255) caGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACACCAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgttt < 1:137775‑M1/143‑39 (MQ=255) caGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgttt < 2:52733‑M1/143‑39 (MQ=255) agctaaaataccGCAGCGTAAAGATTCATCTGCTATAAATAATAACTTTCATGCAGTACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttg < 2:567825‑M1/139‑40 (MQ=255) tCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTAATTTTAAACAGACACTTACCGCACAACAAACTAAggaagatgcgaaaaagtacctcagatgagaccaactttgtc > 2:73762‑M1/1‑102 (MQ=255) ttcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAGTCAACTTAATGTTACTGaaa < 2:83862‑M1/47‑1 (MQ=255) aaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccacgcttattcgcaccgtccCTAATTAAATACAAAGAAAGGCAACAATCAACTTACTGTTAATGAGATGt < 1:257412‑M1/50‑1 (MQ=255) aaggcattgacgtgagaaaagatcgcctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAAGACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGt > 2:492894‑M1/94‑143 (MQ=255) ggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATCAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGttt > 1:584894‑M1/92‑143 (MQ=255) aaCTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctgga > 1:714196‑M1/1‑95 (MQ=255) acccaccGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggag < 1:602503‑M1/140‑50 (MQ=255) tCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtacctgatatgagatcatgtttgtcatctggaacc > 2:630001‑M1/1‑92 (MQ=255) atttactggagaaaaaatcggctcaaacacccagctatgaaaggactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTAc > 2:548824‑M1/89‑143 (MQ=255) aCCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccat > 2:287452‑M1/1‑90 (MQ=255) cGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatag > 1:767537‑M1/1‑88 (MQ=255) gTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatccggagccataga > 2:335632‑M1/1‑87 (MQ=255) cgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACatata > 2:598296‑M1/84‑143 (MQ=255) tAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaa < 1:733554‑M1/143‑58 (MQ=255) gggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttatgcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCCACTTAATGTTCCTGAAATGTTTTACatctat < 1:460556‑M1/61‑1 (MQ=255) ggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATAtt < 2:77368‑M1/62‑1 (MQ=255) ataacCATCTTCTATAAATAAGCACTTTCATGCCATACCAGATACGCTATTTGTAAACAGCCACTTACCGAACCAAAAACTAAttaaggtgctaacaagtccctgagatgagatcatgtttgtcatctggagccatagaacag < 1:292837‑M1/143‑61 (MQ=255) agaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTACTGTTAATGAAATGTTTTACATATATTaa < 1:608824‑M1/64‑1 (MQ=255) agaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTaa < 1:651174‑M1/64‑1 (MQ=255) aatCATCTGCTATAAATAATCACTTTCAGGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacaggg < 2:665285‑M1/143‑63 (MQ=255) aaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTCATTAAAGACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACAAATATTAAcc < 2:676985‑M1/66‑1 (MQ=255) catcTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttc < 1:356982‑M1/143‑66 (MQ=255) aaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACt < 2:536165‑M1/69‑1 (MQ=255) atcTGCTATATTTAACCACTTTCCTGCACTCCCACATAAGCTATTTTTGAACAGACACTTTCCGCACAACAAACTTAggaaggtgcgaacaaggccctgatatgagatcatgtttgtcatctggagccatagaacagggttca < 2:380711‑M1/143‑67 (MQ=255) aatcggctcaaacatgaagaaatgtaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACtt > 2:188423‑M1/74‑143 (MQ=255) ctcggctcaaacatgaccagatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTg > 1:390713‑M1/73‑143 (MQ=255) tataAATAATCCCTTTCGTGCAATACTAGATAAGCTATTTGTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaaggccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatga < 2:538871‑M1/143‑73 (MQ=255) aaataaTCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtc < 2:351701‑M1/143‑76 (MQ=255) ataatCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcat < 2:292889‑M1/143‑78 (MQ=255) ataatCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACAGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctgaagccatagaacagggatcatcatgagtcat > 2:209307‑M1/1‑66 (MQ=255) catgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGga > 2:515797‑M1/62‑143 (MQ=255) tCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaac > 1:726041‑M1/1‑62 (MQ=255) gaaatgaaatgactgagtcagccgagaagaatttcctcgcttattcgcaccttccCTAATTATATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCa > 1:394381‑M1/56‑143 (MQ=255) tttCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttac < 1:703755‑M1/143‑86 (MQ=255) atgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAACGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTa < 2:711885‑M1/91‑1 (MQ=255) taatcactgagtcagccgataagaatttccccgcttattcgcaccttgcCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATTCGGAGAATCAGTacac > 2:344577‑M1/50‑143 (MQ=255) tgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTc > 2:528442‑M1/43‑143 (MQ=255) tgagtcagccgagaagaatttccccgcttattcgaaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTc > 2:198395‑M1/43‑143 (MQ=255) cagccgagaagaatctccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTtata > 1:161661‑M1/38‑143 (MQ=255) cTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgccagtgaattcag > 1:512054‑M1/1‑37 (MQ=255) tATTTTTAAACAGACACTTACCGCACAACAAACTAAggatggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatcgacccgcgttcatcctgcgtcatccacttaccgtcgccgccagtgacttctgc > 2:613169‑M1/1‑36 (MQ=255) gagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTAc < 2:319842‑M1/111‑1 (MQ=255) aTTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgagaacaagtccctgatatgagatcatgtttgtactctggagccatagcacagggttcgtcatgagtcatcaacttaccttcgccgacagtgaattcagca > 1:487756‑M1/1‑35 (MQ=255) gaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTg < 1:400585‑M1/116‑1 (MQ=255) gaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTg < 2:276596‑M1/116‑1 (MQ=255) atttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGaa > 1:536165‑M1/26‑143 (MQ=255) ttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAAt < 1:404963‑M1/120‑1 (MQ=255) aGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccg > 1:655380‑M1/1‑25 (MQ=255) gccacttACCGCACAACACACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctgtagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgt < 1:81828‑M1/141‑120 (MQ=255) ccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATtata < 1:597384‑M1/124‑1 (MQ=255) gcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAGTTACATTTTGAATTATATg < 1:97677‑M1/126‑1 (MQ=255) ttattcgcaccttccCTACTTAAATACAAAGAAAGGCAACCATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGAt > 1:56037‑M1/16‑143 (MQ=255) tactcgcaccttccCTAATTAAATACAAAGAAACGCAACAATCAACTTAATGTTAATGAAATGTTTTATATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATc > 2:275159‑M1/15‑143 (MQ=255) gCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaa > 1:749103‑M1/1‑14 (MQ=255) gcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGCTCACCgg < 2:213956‑M1/134‑1 (MQ=255) acctgccCTAACTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATACTAACCACTTGTTTAATGCGGAGAACCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCGGGa > 1:1294‑M1/8‑143 (MQ=255) aacaaACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagt > 1:648355‑M1/1‑10 (MQ=255) aacaaACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaaga > 1:766997‑M1/1‑10 (MQ=255) aacaaACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagacatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaatttagcagtaagcgccgtcagaccagaaaaga > 1:143439‑M1/1‑10 (MQ=255) caaACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgacgacagtgaattcagcagtaagcgccgtcagaccagaaaagaga < 2:725804‑M1/143‑136 (MQ=255) | GCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCGGGAGTG > NC_000913/1979344‑1979624 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |