New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2667128 =	32 (0.600)	3 (0.060)	3/266	6.6	10.9%	coding (719/1140 nt)	hcaT	putative 3‑phenylpropionic transporter
	?	NC_000913	= 3026941	19 (0.380)					coding (1176/1320 nt)	guaD	guanine deaminase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TTGCAATTACAAGGCTATCGCCTCTCGGCATATGAAGCGTTTTACCTGGCCACGCTCGGCGGAGCGAAATCTCTGGGCCTTGACGATTTGATTGGCAACTTTTTACCTGGCAAAGAGGCTGATTTCGTGGTGATGGAACCCACCGCCACTCCGCTACAGCAGCTGCGCTATGACAACTCTGTTTCTTTAGTCGACAAATTGTTCGTGATGATGACGTTGGGCGATGACCGTTCGATCTACCGCACCTACGTTGATGGTCGTCTGGTGTACGAACGCAA  >  NC_000913/3026804‑3027081                                                                                                                                          |                                                                                                                                             ttGCAATTACAAGGCTATCGCCTCTCGACATATGAAGCGTTTTACCTGGCCACGCTCGGCGGAACGAAATCTCTAGGCCTTGACGATTCGATTGGCAACTTTTTACCTGGCCAAGAGGCTGATTTCATAGAGATGGAAcacaa                                                                                                                                         >  2:526120/1‑142 (MQ=255)       ttACAAGGCTATCGCCTCTCGGCATATGAAGCGTTTTACCTGGCCACGCTCGGCGGAGCGAAATCTCTGGGCCTTGACGATTTGATTGGCAACTTTTTACCTGGCAAAGAGGCTGATTTCGTGGTGATGGAACCCACCGCCAc                                                                                                                                   >  2:520769/1‑143 (MQ=255)           aaGGCTATCGCCTCTCGGCATATGAAGCGTTTTACCTGGCCACGCTCGGCGGAGCGAAATCTCTGGGCCTTGACGATGTGATTGGCAACTTGTTACCTGGCAAAGAGGCTGCGTGCGGGCTGATGGAAACCACCGcagcgacg                                                                                                                               >  2:40824/1‑136 (MQ=255)                                         ttgaCCGGGCCACGCTCGGGCGAGCGAAAGCTCTGGGCCTGGACGATTTGATTGGCAACTGTTTACCCGCCAAAGAGGCTGATTTCGTGGTGATGGAACCCACCGCCACTCCGCTACAGCAGCTGCGCTATGACAACTCTGtt                                                                                                 <  2:100583/140‑1 (MQ=255)                                         cttACCTCGCCACGCTCGGCGGAGCGAAAGCTCTGCGCCTTGACGATTTGATTGGCAACTTTTTACCTGGCAAAGAGGCTGATTCCGTGGTGATGGAACCCACCGCCACTCCGCTACAGCAGCTGCGCTATGACAACTCTGtt                                                                                                 <  2:42858/142‑1 (MQ=255)                                                        tgggcggAGCGAAAACTCTGGGCCTTGCGGATTTGATGGGCAACTTTCTACCTGGCACAGGGGCTGATCGCGTGGTGATGGAACCCACCGCCACTCCGCTACAGCAGCTGCGCTATGACAACTCTGTTTCTTTAGTCGACaaa                                                                                  <  2:143455/141‑1 (MQ=255)                                                         cgtgggAGCGAAATCTCTGGGCCTTGACGATTTGATTGGAAACTTTTTACCGGGCAGAGAGGCTGATTTCGTGGTGATGGAACCCACCGCCACTCCGCTACAGCAGCTGCGCTATGACAACTCTGTTTCTTTAGTCGACAAAt                                                                                 <  2:662002/139‑1 (MQ=255)                                                              tctcgcaaTCGCTGCGCCTTCGTGATTTGATTGGCAACTTTTTACCTGGCAAAGACGCTGATTTCGTGGTGATGGAACCCACCGCCACTCCGCTACAGCAGCTGCGCTATGACAACTCTGTTTCTTTAGTCGACAAATTGTTc                                                                            <  2:327838/137‑1 (MQ=255)                                                                   aaaTCTCTGGGCCTTGACGATTTGATTGGCAACTTTTTACCTGGCAAAGAGGCTGATATCGTGGTGATGGAACCAACCGCCACTCCGCTACAGCAGCTGCGCTGAGACAACTCTGTCTCTTTAGTCGACAAATTGTTCGtgag                                                                       >  2:40367/1‑142 (MQ=255)                                                                                           aTTGGCAACTTTTTACCTGGCAAAGAGGCTGATTTCGTGGTGATGGAACCCACCGCCACTCCGCTACAGCAGCTGCGCTATGACAACTCTGTTTCTTTAGTCGACAAATTGTTCGTGATGATGACGTTGGGCGATGACCGTTc                                               <  1:520769/143‑1 (MQ=255)                                                                                               gCAACTTTTTACCTGGCAAAGAGGCTGATTTCGTGGTGATGGAACCCACCGCCACTCCGCTACAGCAGCTGCGCTATGACAACTCTGTTTCTTTAGTCGACAAATTGCTCGTGATGATGACGTTGGGCGATGACCGTTCGGTc                                           >  2:898760/1‑143 (MQ=255)                                                                                                     ttttACCTGGCAAAGAGGCTGATTTCGTGGTGATGGAACCCACCGCCACTCCGCTACAGCAGCTGCGCTATGACAACTCTGTTTCTTTAGTCGACAAATTGTTCGTGATGATGACGTTGGGCGATGGCCGTTCGATCTACCGc                                     >  1:921055/1‑143 (MQ=255)                                                                                                             ggCAAAGAGGCTGATTTCGTGGTGATGGAACCCACCGCCACTCCGCTACAGCAGCTGCGCTATGACAACTCTGTTTCTTTAGTCGACAAATTGTTCGTGATGATGACGTTGGGCGATGACCGTTCGATCTACCGCACCTACga                             >  1:788798/1‑142 (MQ=255)                                                                                                                 aaGAGGCTGCTTGCGGGGTGATGGAACCCACCGCCACTCCGCTACAGCAGCTGCGCTATGACAACTCTGTTTCTTTAGTCGACAACTTGTTCGTGATGATGACGTTGGGCGATGACCGTTCGATCTACCGCACCTACGTTGAt                         <  2:548108/143‑1 (MQ=255)                                                                                                                      gCTGATTTCGTGGTGATGGAACCCACCGCCACTCCGCTACAGCAGCTGCGCTATGACAACTCTGTTTCTTTAGTCGACAAATTGTTCGTGATGATGACGTTGGGCGATGACCGTTTGATCTACCGCACCTACGTTTATGgtcg                    >  1:253048/1‑143 (MQ=255)                                                                                                                        tGATTTCGTGGTGATGGAACCCACCGCAACTCCGCTACAGCAGCTGCGCTATAAAAACACTGTTTATTTAGTAGACAAATTGTTCGTGATGATGACGTTGGGCGATGACCGTTCGATCTACCGCACCTACGTTGACGgtcgtc                  >  1:136772/1‑143 (MQ=255)                                                                                                                                tggtgTTGGAACCCGCCGCCGCTCCGCGACAGCAGCTGCGCTATGACAACTCTTTTTCTTTAGTCGACAAATTGTTCGTGATGATTACGTTGGGCGATGGCCGTTCGATCTACCGCACCTTCGTTGATGGTCGTCTGGTGTAc          <  2:475455/143‑1 (MQ=255)                                                                                                                                    gATGGAACCCACCGCCACTCCGCTACAGCAGCTGCGCTATGACAACTCTGTTTCTTTAGTCGACAAATTGTTCGTGATGATGACGTTGGGCGATGACCGTTCGATCTACCGCACCTACGTTGATGGACGACGGGTGGACGAAc      >  2:193180/1‑143 (MQ=255)                                                                                                                                       ggAACCCACCGCCACTCCGCTACAGCAGCTGCGCTATGACAACTCTGTTTCTTTAGTCGACAAATTGTTCGTGATGATGACGTTGGGCGATGACCGTTCGATCTACCGCACCTACGTTGATGGTCGTCTGGTGTACGAACGCa   >  2:922240/1‑143 (MQ=255)                                                                                                                                       ggAACCCACCGCCACTCCGCTACAGCAGCTGCGCTATGACAACTCTGTTTCTTTAGTCGACAAATTGTTCGTGATGATGACGTTGGGCGATGACCGTTCGATCTACCGCACCTACGGTGATGGTCGTCTGGTGTACGACCGCa   >  2:641837/1‑143 (MQ=255)                                                                                                                                        gAACCCACCGCCACTCCGCTACAGCAGCTGCGCTATGACAACTCTGTTTCTTTAGTCGACAACTTGTTCGTGATGATGACGTTGGGCGATGACAGTTCGATCTAACGCACCTACGTTGATGGTAGTCTGGTGTACGAACGCaa  >  1:20654/1‑143 (MQ=255)                                                                                                                                          |                                                                                                                                             TTGCAATTACAAGGCTATCGCCTCTCGGCATATGAAGCGTTTTACCTGGCCACGCTCGGCGGAGCGAAATCTCTGGGCCTTGACGATTTGATTGGCAACTTTTTACCTGGCAAAGAGGCTGATTTCGTGGTGATGGAACCCACCGCCACTCCGCTACAGCAGCTGCGCTATGACAACTCTGTTTCTTTAGTCGACAAATTGTTCGTGATGATGACGTTGGGCGATGACCGTTCGATCTACCGCACCTACGTTGATGGTCGTCTGGTGTACGAACGCAA  >  NC_000913/3026804‑3027081

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.