| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 4,001,645 | Δ5 bp | coding (220‑224/951 nt) | corA → | magnesium/nickel/cobalt transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4001644 | 1 (0.020) | 54 (1.020) | 45/284 | 0.2 | 98.2% | coding (219/951 nt) | corA | magnesium/nickel/cobalt transporter |
| ? | NC_000913 | 4001650 = | 1 (0.020) | coding (225/951 nt) | corA | magnesium/nickel/cobalt transporter | |||||
GGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGC > NC_000913/4001508‑4001781 | agtgtggattgagcgtgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatc < 1:620684‑M2/1‑1 (MQ=255) gtatggattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatct > 2:772645‑M2/142‑143 (MQ=255) atggagtggtcttggcgaacgggacgacgacgagcgactgcgcgtacaatctgaactgggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTcc < 1:447447‑M2/4‑1 (MQ=255) ggtctgatcgtgtcgcatcggacggcgacgcgcgactgcgcgtacaatcggaacttggccggagcctggcaacccgcccggcactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCctt < 2:129849‑M2/6‑1 (MQ=255) atcttgtcgaaccggacgacgacgagcggctgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCcttcttctt > 1:408648‑M2/132‑143 (MQ=255) ttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgcagcatcggcacgtttctttgaagacgacgccggcctgcatCCCcttcttcttctt > 1:792063‑M2/129‑143 (MQ=255) cgacgacgggcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGaa < 2:400402‑M2/28‑1 (MQ=255) gacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctctgaagacgacgacggcctgcatCTCCTTCTTCTCCTTTGAAGATGCGGAagacc > 2:153976‑M2/112‑141 (MQ=255) gcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGcc < 2:174188‑M2/37‑1 (MQ=255) actgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagtatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGt < 1:72341‑M2/40‑1 (MQ=255) ctgcgcgtacaatctgaacttggccagagcctggcaaccagcacggaactggaagacatcgaaacatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGCTGCGGAAGATCTCTCCGgtc > 1:205523‑M2/103‑142 (MQ=255) ttcgcgtacaatctgaactccgccagcgcctggcaacccgcccggaactggaagccctcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTaa < 1:108681‑M2/42‑1 (MQ=255) cgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTCACt > 2:146585‑M2/100‑143 (MQ=255) atctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACtgtg < 2:743883‑M2/52‑1 (MQ=255) atctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACtgtg < 2:937897‑M2/52‑1 (MQ=255) tgaagtgggccagagcctggcaacccgcccggcactggaggtcgtggtcgcagcggcacgtttctttgaactcgacgacggcctgcatCTCCTTCTGCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCa < 1:904600‑M2/55‑1 (MQ=255) acttggccagagcctggcaacccgcccggaactggaagagaccgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTACCTCCACTGTGGCAttt < 2:936746‑M2/58‑1 (MQ=255) acttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgccgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCAttt < 1:47634‑M2/58‑1 (MQ=255) cttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTa < 1:729728‑M2/59‑1 (MQ=255) ccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATc > 1:863203‑M2/80‑143 (MQ=255) gcctggcagctcgcccggcactggaagacatcgaagcatcgtcacgtttctttgaagacgacgacggcctgcatGTCCTGCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACCCCACTGTGGCATTTACCATCCGTGa < 2:242026‑M2/69‑1 (MQ=255) cctggcaacccgcccggaactggaagacatcgaagcagcggcacggttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGAt < 2:401963‑M2/70‑1 (MQ=255) ctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCCTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTATGGCATTTACCATCCGtgacg > 1:760183‑M2/73‑141 (MQ=255) ggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGgt > 2:791833‑M2/71‑143 (MQ=255) gcaaccctcccggaactggaagacatcgaagcgtcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTGCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGgtc < 2:301731‑M2/74‑1 (MQ=255) tcgGAACTTGAATACATCGATGCATAGGCACGTTTCTTTGAAGACGATGACTGCTTGCAT‑‑‑‑‑CTCCTTGTTATTTTTTTAAGATGCGGAAGATCACGCCGGTAACTCTACTTTGGCATTTACTATCCGTGATGGTCGTCTGTTTa < 2:463122/142‑1 (MQ=255) ccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATTACAATGTGATCTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTg > 1:944199‑M2/65‑143 (MQ=255) ccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTg < 1:208378‑M2/79‑1 (MQ=255) ccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTg > 2:652391‑M2/65‑143 (MQ=255) cgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGt < 2:841058‑M2/80‑1 (MQ=255) gcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGtt < 2:449305‑M2/81‑1 (MQ=255) cccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTgttc > 2:558803‑M2/62‑142 (MQ=255) ggaacgtgaagacatcgaagcatcggcgcgtttctttgaagacggcgacgggctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCCCGCCGGTAACTCCACTGTGGCATTTACCATCCGTGGTGGTCGTCTTTTTAct < 2:388988‑M2/85‑1 (MQ=255) actggaagacatcgaagcatcggcacgattctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTg > 2:527295‑M2/56‑143 (MQ=255) ctggaagacagcgaaaaaccggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgc < 1:253003‑M2/89‑1 (MQ=255) gaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcgtg > 1:453153‑M2/52‑143 (MQ=255) agacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcgtgag > 1:356596‑M2/50‑143 (MQ=255) gacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGAGCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcgtgagc < 1:203611‑M2/95‑1 (MQ=255) atcgaagcatcggcacgtttctttgaagacgacgacgtcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcgtgagcgtg < 1:839628‑M2/98‑1 (MQ=255) tcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTCACTCCACTGTGGCATTTACCATCCGTGATGGTCGCCTGTTTACTCTgcgtgagcgtga > 2:696004‑M2/45‑143 (MQ=255) cgacgcaccggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTTTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGaa < 1:229819‑M2/100‑1 (MQ=255) cgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGaa < 1:772645‑M2/100‑1 (MQ=255) cgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGaa < 1:746941‑M2/100‑1 (MQ=255) gaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAAc < 1:676378‑M2/101‑1 (MQ=255) gcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGGCGTCTGTTTACTCTGCGTGAGCGTGAACTACCCGCtt > 2:738332‑M2/34‑143 (MQ=255) gtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACGGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGGGCGTGGACTGCCCGCTTTTCg > 1:938486‑M2/30‑143 (MQ=255) gtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGAGCACGCCGGTAACTCCCCTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCg > 1:803242‑M2/30‑143 (MQ=255) ttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTc > 1:47221‑M2/28‑143 (MQ=255) ttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTc > 1:49394‑M2/28‑143 (MQ=255) tctttgaaggcgacgacggcctgcatCTCCTTCTGCTTCTTTGATGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCt < 2:234260‑M2/117‑1 (MQ=255) gaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATc > 1:786253‑M2/22‑143 (MQ=255) gacgactgcttgcatCGCCTTCTTCTTCGGTGGGGATGCGGAAGATCAGGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCGGCGTGAGCGTGAACTGTCCGCTTTTCGTCTGTATCGTATGc < 2:377453‑M2/128‑1 (MQ=255) gacgacggcctgcgaCTCCTGCTTCTCCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGc < 1:146585‑M2/128‑1 (MQ=255) gacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACTATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGc < 1:746965‑M2/128‑1 (MQ=255) acggcccgcagCTCCCTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGCCATTCAACCTCCGTTAGGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGc < 1:854908‑M2/132‑1 (MQ=255) | GGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGC > NC_000913/4001508‑4001781 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |