| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 4,049,913 | IS2 (–) +5 bp | noncoding (15‑19/109 nt) | spf → | Spot 42 sRNA antisense regulator of galK translation, Hfq‑dependent |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4049913 = | 1 (0.020) | 71 (1.340) | 50/284 | 0.1 | 98.6% | noncoding (15/109 nt) | spf | Spot 42 sRNA antisense regulator of galK translation, Hfq‑dependent |
| ? | NC_000913 | 4498181 = | NA (NA) | noncoding (1/1331 nt) | IS2 | repeat region | |||||
| * | ? | NC_000913 | = 4049917 | 0 (0.000) | 71 (1.360) | 58/280 | 0.0 | 100% | noncoding (19/109 nt) | spf | Spot 42 sRNA antisense regulator of galK translation, Hfq‑dependent |
| ? | NC_000913 | = 4499511 | NA (NA) | noncoding (1331/1331 nt) | IS2 | repeat region | |||||
GCAGGGGGGATTATCAGAATCCGCGGTTATTCATTATTTATATACATTCAATAAAAAAGTAACCTCATAAAAA‑ATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAG > NC_000913/4498039‑4498319 | gCAGGGGGGATTATCAGAATCCGCGGTTATTCATTATTTATATACATTCACTAAACAAGGAACCTCATAAAAA‑ATACTGTACTCATAGGGTGATGCGGGATAACTGACGGAAGGAGTGCTGCAGGGTGTTGATGGTCGCTTGt > 2:138817/1‑143 (MQ=255) ctgtgtggATTATCAGAATCCGAGGTTATTCATTATTTATATACATTCAATAAAAAAGTAACCTCATATAAA‑AGCCTGTACTTACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGACTTGATGGTCCCTTGTa < 1:731736/137‑1 (MQ=255) gggggATTATCAGAATCCGCGGTTATTCATTATTTATATACATTCAATAAAAAAGTAACCTCATAAAAA‑ATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGAc < 1:893326/143‑1 (MQ=255) gggATTATCAGAATCCGCGGTTATTCATTATTTATATACATTCAATAAAAAAGTAACCTCATAAAAA‑ATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTg < 1:438377/143‑1 (MQ=255) tATCAGAATCCGCGGTTATTCATTATTTATATACATTCAATAAAAAAGTAACCTCATAAAAA‑ATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGAGCGGcccc > 2:858793/1‑143 (MQ=255) tATCAGAATCCGCGGTTATTCATTATTTATATACATTCAATAAAAAAGTAACCTCATAAAAA‑ATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGcccc < 1:686234/143‑1 (MQ=255) tCAGAATCCGCGGTTATTCATTATTTATATACATTCAATAAAAAAGTAACCTCATAAAAA‑ATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGCGTGCTGCAGGGCTTTGATGGTCCCTTGTAAACTGGCCCCCt > 2:148581/1‑143 (MQ=255) cAGAATCCGCGGTTATTCATTATTTATATACATTCAATAAAAAAGTAACCTCATAAAAA‑ATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTg < 2:511536/143‑1 (MQ=255) aGAATCCGCGGTTATTCATTATTTATATACATTCAATAAAAAAGTAACCTCATAAAAA‑ATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGa < 1:890142/143‑1 (MQ=255) taaTCCGTGGTTATTCATTATTTATATACATTTAATAAAAAAGTAACCTCATAAAAA‑ATCCTGTATTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGaa < 2:132253/142‑1 (MQ=255) gAATCCGCGGTTATTCATTATTTATATACATTCAATAAAAAAGTAACCTCATAAAAA‑ATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGaa < 2:90357/143‑1 (MQ=255) aaTCGGTGGTTAGTTATTATTTCTATACATTCAATAAGAAAGTAACCTCATAAAAA‑GTCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTACACTGGCCCCCTGAAt < 2:804562/143‑1 (MQ=255) cgtcgTTATTCATTATTTATATTCATTCAATAAAAAAGTAACCTCATAAAAA‑ATCCTGTTCTCACAGGGTGATGCGGGATAACTGACGTAAGTAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAAtttcg < 2:555716/139‑2 (MQ=255) cgcgGTTATTCATTATTTATATACATTCAATAAAAAAGTAACCTCATAAAAA‑ATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTcc < 2:115408/143‑1 (MQ=255) cgcgGTTATTCATTATTTATATACATTCAATAAAAAAGTAACCTCATAAAAA‑ATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTcc < 1:231346/143‑1 (MQ=255) gcgGTTATTCATTATTTATATAAATTCCATAAAAAAGTAACCTCATAAAAACATCCGG‑CGTCATAATCAAAAGATAGATAAGTGACGTAAGGAGTGCGGCAGGGGTTTGATGGTGCCTTGTAGACTGGCCCCCTGAATCTCCa > 2:678168/1‑143 (MQ=255) cgGTTATTCATTATTTATATACATTCAATAAAAAAGTAACCTCATAAAAA‑ATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAg < 1:555395/143‑1 (MQ=255) ggTTATTCATTATTTCTCTACCTTCAATAAAAAAGTAACCTCATAAAAA‑ATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGa < 2:619129/143‑1 (MQ=255) aTTCATTATTTATATACATTCAATAAAAAAGTAACCTCATAAAGA‑ATCCTGTACTCACAGGGTGATGAGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAAc > 2:120971/1‑143 (MQ=255) ttCATTATTTATATACATTCAATAAAAAAGTAACCTCATAAAAA‑ATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCCGACAAcc > 1:624680/1‑143 (MQ=255) cATTATTTCTAGACATTCAATAAAAAAGTAACCTCATAATAA‑ATCCTGTACTCACAGGGTGATGCGGGATAACTGTCGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCaa < 1:299773/143‑1 (MQ=255) cATTATTTATATACATTCAATAAAAAAGTAACCTCATAAAAA‑ATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCaa < 1:626884/143‑1 (MQ=255) tataCATTCAATAAAAAAGTAACCTCATAAAAA‑ATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTa > 1:810962/1‑143 (MQ=255) taCATTCAATAAAAAAGTAACCTCATAAAAA‑ATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTaaa > 2:674297/1‑143 (MQ=255) aCATTCAATAAAAAAGTAACCTCATAAAAA‑ATCCTGTACTCACAGGGTGATACGGGATAACTGACATAAGGACTGCTCCAGGCATTAGATGGTCCCTTGTCGACTGCCCCCCTGCATCTCCACACAACCACTACCACTTactt > 2:174534/1‑140 (MQ=255) aCATCCAATAAAAAAGTAACCTCATAAAAA‑ATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAAt < 1:781984/143‑1 (MQ=255) ttCAATAAAAAAGTAACCTCATAAAAA‑ATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATATCCAGACAACCAATATCACTTAAATAAg > 2:454885/1‑143 (MQ=255) tCAATAAAAAAGTAACCTCATAAAAA‑ATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGt < 1:672929/143‑1 (MQ=255) tAAAAAAGTAACCTCATAAAAA‑ATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATa < 2:51947/143‑1 (MQ=255) tAAAAAAGTAACCTCATAAAAA‑ATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATa < 1:169672/143‑1 (MQ=255) aaaaaaGTAACCTCATAAAAA‑ATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAACTAAGTGATAg > 2:442999/1‑143 (MQ=255) aaaaaGTAACCTCATAAAAA‑ATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTATTTAAGTGATatt < 2:13601/143‑3 (MQ=255) gTAACCTGATAAAAA‑AGCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTaa < 1:581077/143‑1 (MQ=255) tAAAAA‑ATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGttt < 1:674297/143‑1 (MQ=255) aaaaa‑aTCCTGTACGCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGtttt < 2:312612/143‑1 (MQ=255) aattgaTCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGtttt < 1:170366/138‑1 (MQ=255) aaaa‑aTCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGttttt > 2:216881/1‑143 (MQ=255) aaaa‑aTCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGttttt < 1:40075/143‑1 (MQ=255) aaa‑aTCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTa < 2:630536/143‑1 (MQ=255) aaa‑aTCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTa < 1:300316/143‑1 (MQ=255) ccTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTa < 2:375883/143‑1 (MQ=255) gTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGta > 2:342991/1‑142 (MQ=255) tCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTg < 1:317481/143‑1 (MQ=255) acaGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGga < 2:750416/143‑1 (MQ=255) ggTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGACTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATACCACCCCAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGgagacc > 1:215877/1‑141 (MQ=21) gtgttcaCTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTACTTTTTAGACTAGTCATTGGAGAACAGAtgatt < 2:498799/137‑1 (MQ=255) ggATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGAtgattg > 1:299182/1‑143 (MQ=255) agaaCTGGCGTAAGGGGTGCTGCAGGGATTTGATGGTCCCTGGTAGACTGGCCCCCTGAATCTCCAGAGAATCTATATCACTTAAATAAGTGATAGTCTTAATACGAGTTTTTAGACTAGTCATTGGAGAACAGAtgattggt < 2:72434/141‑3 (MQ=17) aTAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTTCCTGGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGAtgattgat < 1:485430/143‑1 (MQ=255) aTAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGAtgattgat < 2:917115/143‑1 (MQ=255) aTAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGAtgattgat < 1:580058/143‑1 (MQ=255) tGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCGCTTAAATAAGTGATAGTCTGAATACTAGTTTTTAGACTAGTCATTGGGGCACAGATGATTGCTGCCtt > 1:836091/1‑143 (MQ=18) tGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCtt > 1:123505/1‑143 (MQ=255) gcGTGAGGAGGGCTGCAGGCATTTGATCGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAg < 2:29898/142‑1 (MQ=255) aCGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAg < 1:785788/143‑1 (MQ=255) cGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAgg < 1:103054/143‑1 (MQ=255) aGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCGGACACCCAATATCACTTAACTAAGTGATAGTCTTAATACTAGTTTTTAGCCTAGTCATTGGCGAACAGATGATTGATGTCTTAGGGCCg > 1:53373/1‑143 (MQ=17) gggggctgcAGGGATGTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCGATATCACTTAGATAAGGGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGga < 2:256183/139‑1 (MQ=17) gcgTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTTAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGga < 1:291493/141‑1 (MQ=255) gAGTGCTGGAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGga < 2:398394/143‑1 (MQ=255) gAGTGCTGCTGGGATGTGCTGGTCCCTTGTAGGCTGGCCCCCTGAAGCTCCAGTCAACCAGTATCACTTGAATAAGTGATAGTCTTAATACGAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGga < 2:734071/143‑1 (MQ=14) aGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGgag > 1:896802/1‑143 (MQ=255) gctgcAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCAATGGAGAACAGATGATTGATGTCTTAGGGCCGGAGaaa > 2:259840/1‑143 (MQ=255) cAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCa > 2:94103/1‑44 (MQ=255) cAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCa < 1:94103/44‑1 (MQ=255) gggATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGCTTGATGTCTTAGGGCCGGAGACACGCAGa > 1:794712/1‑143 (MQ=255) gggATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGa > 1:553441/1‑143 (MQ=255) tttGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGCGAAACGCAGACGGc > 1:199916/1‑143 (MQ=255) cttGATGGGCGCTGGTAGACTGGCCCCCTGCATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGc < 1:349075/142‑1 (MQ=255) tGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATACGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGCGCACAGATGATTGATGTCTTAGGGCCGAAGCAACGCAGACGGCggccc > 2:491739/1‑139 (MQ=11) tGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGCAACGCAGACGGCGTAcc > 2:695501/1‑143 (MQ=38) ccTTGTAGACTGGCCCCCTGTATCTCCAGACAACCAGTATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACcacaca < 2:214941/143‑1 (MQ=18) ccTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTCCcgcaca > 2:728967/1‑143 (MQ=18) ttagTAGACTGGCCCCCTGAAGCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAg < 1:459199/140‑1 (MQ=1) | GCAGGGGGGATTATCAGAATCCGCGGTTATTCATTATTTATATACATTCAATAAAAAAGTAACCTCATAAAAA‑ATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAG > NC_000913/4498039‑4498319 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |