New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3845531 =65 (0.980)58 (0.940) 54/264 0.1 48.1% coding (1568/1767 nt) adeD cryptic adenine deaminase
?NC_000913 = 3992760 65 (1.050)coding (1608/2547 nt) cyaA adenylate cyclase

Only 100 of 129 total aligned reads displayed.

TAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGACAGCGGCGTTCCGCAATCAGGTGGTGCATTTCGATTTCCGTAAGCTGGATGTCTTCAGCTTT  >  NC_000913/3992619‑3992901
                                                                                                                                             |                                                                                                                                             
tAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCACACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTg                                                                                                                                              <  1:175397‑M2/143‑2 (MQ=255)
    cTGGTAGCGTGAGCATAGTTCAACGGCCTGCTGACCTCGCGCACGCGTGTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTgcacc                                                                                                                                          >  1:728807‑M2/1‑138 (MQ=255)
    cTGATGGCTTGAGCATGGTTTAACGGCATCCGGAGCCCGCGCGCCCGGTTGTATATCAAAGGTAACGGCATTGTCGCTTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTgcacc                                                                                                                                          >  1:152612‑M2/1‑138 (MQ=255)
     tggtggCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTgcaccg                                                                                                                                         <  1:1177222‑M2/143‑7 (MQ=255)
          gCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGCCGTGTCGCACCATTCCCCGCTGCGCTTACCCgcaccgacccg                                                                                                                                    <  2:1085099‑M2/143‑12 (MQ=255)
              tggCATGGTTTAACGGCCTGAGGCCCTCGCAAATACGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAg                                                                                                                                <  1:499103/142‑1 (MQ=255)
              gggCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAg                                                                                                                                <  1:459959/143‑1 (MQ=255)
                 cATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGgcg                                                                                                                             <  1:890271/143‑1 (MQ=255)
                 cATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATAGTAAAGGTAACGGCATTGGCGATTTGCCTAAGTTGCAGGAGACGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTgcaccgacgcggcgcagg                                                                                                                             <  2:752312‑M2/143‑19 (MQ=255)
                  aTGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGgcgc                                                                                                                            >  1:729099/1‑143 (MQ=255)
                  aTGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGgcgc                                                                                                                            <  1:1158982/143‑1 (MQ=255)
                  aTGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGgcgc                                                                                                                            <  2:515325/143‑1 (MQ=255)
                     gTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGACATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCTCTGCGCTTATCTgcaccgacacggcgcagtcgct                                                                                                                         <  1:113640‑M2/143‑23 (MQ=255)
                      tttAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGCCACCGAACGCGCTCTa                                                                                                                        >  1:802849/1‑143 (MQ=255)
                       ttAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATGTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTgcaccgacacggcgcagtcgctgg                                                                                                                       >  2:624354‑M2/1‑119 (MQ=255)
                         caCGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAg                                                                                                                     <  1:641334/142‑1 (MQ=255)
                           cGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGcc                                                                                                                   >  1:610221/1‑143 (MQ=255)
                            ggCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGccc                                                                                                                  >  1:988278/1‑143 (MQ=255)
                            ggCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCACTCTACAGccc                                                                                                                  >  2:683561/1‑143 (MQ=255)
                             gCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCg                                                                                                                 >  1:498409/1‑143 (MQ=255)
                             gCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGACGCTCCACCGCCCg                                                                                                                 >  1:656455/1‑143 (MQ=255)
                              ccTGCTGACCTCGCGCTCCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTGCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCgt                                                                                                                <  2:685289/143‑1 (MQ=255)
                                tgctgACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCgtgt                                                                                                              >  1:559568/1‑143 (MQ=255)
                                   tgACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCGGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTgcaccgacacggcgcagtcgctggcggaacaaattg                                                                                                           >  1:318898‑M2/1‑107 (MQ=255)
                                   tgACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTgcaccgacacggcgcagtcgctggcggcacaaattg                                                                                                           <  1:91393‑M2/143‑37 (MQ=255)
                                   tgACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTgag                                                                                                           >  1:519944/1‑143 (MQ=255)
                                      ccTCGCGCACCCGTTTGTCTGTAAAAGGTAACGGCATTGTCGATGTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATc                                                                                                        <  1:808045/143‑1 (MQ=255)
                                       cTCGCTCTCCTGTTTGTATATTAGAGTTAGCGGCATTGTCGATTTGCCTAAGTTGAAGGAGATGGTCGCCGCCGTGTCGCACCATTTCCCGCTGCTCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATcc                                                                                                       <  2:793352/143‑1 (MQ=255)
                                       cTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTgcaccgacacggcgcagtcgctggcggaacaaattgacgc                                                                                                       <  1:1007308‑M2/143‑41 (MQ=255)
                                        tCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTtcaccgacacggcgcagtcgctggcggaacaaattgacgcc                                                                                                      <  1:551160‑M2/143‑42 (MQ=255)
                                         cgcgCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTgcaccgacacggcgcagtcgctggcggaacaaattgacgcct                                                                                                     <  1:430020‑M2/143‑43 (MQ=255)
                                          gcgcACCCGTTTGTATATTAAAGGTAAAGGCATTGTCGATTTGCATAAGTTGCAGGAGATGGGGGCAGTTGGGTCGCACCATTTCACGATGCGCTTACCTGCACCGACACCGAAGACGCTGTACAACACGTGTgcgactcgcg                                                                                                    >  2:1110968/1‑137 (MQ=255)
                                            gcACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTgccccgccacgacgcagtcgcccgcggaacaacttgacgccttga                                                                                                  <  1:1069424‑M2/143‑46 (MQ=255)
                                             cACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTgcaccgacacggcgcagtcgctggcggaacaaattgacgccttgaa                                                                                                 >  1:15485‑M2/1‑97 (MQ=255)
                                              aCCCGTTTGTATATTAAAGGTAACGGCATTGTCCATTCGCCTAAGTTACAGGAGATGGTCGCCGACGTGTCGCACCATCTCCCGCTGCCCTTACCTCCACCGACCCCGAAGGCGCCCTCCCGCCCCCGTGCCATCCGcacgcg                                                                                                >  2:388866/1‑138 (MQ=255)
                                               cccGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTgcaccgacacggcgcagtcgctggcggaacaaattgacgccttgaaag                                                                                               >  2:461137‑M2/1‑95 (MQ=255)
                                                cggtgtgtatCTTGAAGGTAACGGCATTGTCGATTTGCCTACGTGGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTgcaccgacacggcgcagtcgctggcggaacaaattgacgccttgaaagc                                                                                              >  2:646990‑M2/3‑94 (MQ=255)
                                                ccGTTTGTATATTGAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCttt                                                                                              <  1:396933/143‑3 (MQ=255)
                                                  gTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTgcaccgacacggcgcagtcgctggcggaacaaattgacgccttgaaagccg                                                                                            >  2:583183‑M2/1‑92 (MQ=255)
                                                  gTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCAGTTCCCGCTGCGCTTACCTgcaccgacacggcgcagtcgctggcggaacaaattgacgccttgaaagccg                                                                                            <  2:975185‑M2/143‑52 (MQ=255)
                                                   tttGTATATTAAAGGGATCTGCATTGTCGATTTTGCTAAGTTGCAGGAGATGGGCGCCGACGTGTCGCTCCATTTCCCGCTGCGCTTACCTGCTCCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGa                                                                                           <  2:1109877/143‑1 (MQ=255)
                                                     tGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTgcaccgacacggcgcagtcgctggcgcaacaaattgacgccttgaacgccgccg                                                                                         <  2:892199‑M2/143‑55 (MQ=255)
                                                         tatTAAAGGTAACGGCATTGTCGATTTGCCTCAGTTGCAGGCGATGCTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTgcaccgacacggcgcagtcgctggcggaacaaattgacgccttgaaagccgccgcccg                                                                                     >  1:659710‑M2/1‑85 (MQ=255)
                                                          atTAAAGGTAACGGCATTGTCGATTTGCTTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGt                                                                                    <  2:526202/143‑1 (MQ=255)
                                                           ttAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTgcaccgacacggcgcagtcgctggcggaacaaattgacgccttgaaagccgccgcccgtg                                                                                   <  2:1203812‑M2/143‑61 (MQ=255)
                                                           ttAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGtt                                                                                   >  1:842841/1‑143 (MQ=255)
                                                            tAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGGTCCGCCATCGGGCGATTATCGGTa                                                                                  >  1:653655/1‑143 (MQ=255)
                                                              acggTAGCGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGCCGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTNAGATCCGCCATCTGGCGATTATCGTTAAc                                                                                <  1:903596/141‑1 (MQ=255)
                                                              aaGGTAACGGCATTGTCGATTTACCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAAc                                                                                <  1:954565/143‑1 (MQ=255)
                                                                 gTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTGACCTg                                                                             >  1:114205/1‑143 (MQ=255)
                                                                    aCGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTgcaccgacacggcgcagtcgctggcggaacaaattgacgccttgaaagccgccgcccgtgaatgcggtc                                                                          >  1:96271‑M2/1‑74 (MQ=255)
                                                                      ggCATTGTCGAGTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTgcaccgacacggcgcagtcgctggcggaacaaattgacgccttgaaagccgccgcccgtgaatgcggtccg                                                                        >  1:851936‑M2/1‑72 (MQ=255)
                                                                          ttGTCGCTTTGCCGAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGAc                                                                    <  2:622254/143‑1 (MQ=255)
                                                                            ttcGTTTTGTCTAGGTTGCAGGAGAAGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTgcaccgacacggcgcagtcgctggcggaacaaattgacgccttgaaagccgccgcccgtgaatgcggtccgttaccc                                                                  >  1:132516‑M2/2‑66 (MQ=255)
                                                                            gTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACATgcaccgacacggcgcagtcgctggcggaacaaattgacgccttgaaggccgccgcccgtgaatgcggtccgttacaa                                                                  <  2:463675‑M2/143‑78 (MQ=255)
                                                                               gATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACAATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGACGATTATAGATAACCTGGAATATGACACggc                                                               >  2:885860/1‑141 (MQ=255)
                                                                               gATTCGTCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTgcaccgacacggcgcagtcgctggcggaacaaattgacgccttgaaagccgccgcccgtgaatgcggtccgttacccgat                                                               <  1:513217‑M2/143‑81 (MQ=255)
                                                                                aTTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTACCCTGGAATATGACCCGACa                                                              >  1:399399/1‑143 (MQ=255)
                                                                                    gCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGCGAGCCGCCATCTGGCGCGGATCGTTAACCTGGAATATGACCCGACAgcgg                                                          >  2:747080/1‑143 (MQ=255)
                                                                                    gCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGACGATCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGACAgcgg                                                          >  1:1134933/1‑143 (MQ=255)
                                                                                     gcgatgTTGCAGGGTATTGTCTCCGACGTTTTGCACAATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGCGGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGACAgcggc                                                         <  2:47685/138‑1 (MQ=255)
                                                                                     ccTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCCacaccgacacggcccagtcgctggcgggacaaattgacgccttgaaagcccccgcccgccaatgcggtccgttgcccgtcgagccg                                                         <  2:620208‑M2/143‑87 (MQ=255)
                                                                                      cTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTgcaccgacacggcgcagtcgctggcggaacaaattgacgccttgaatgccgccgcccgtgaatgcggtccgttacccgatgagccgt                                                        >  2:173504‑M2/1‑56 (MQ=255)
                                                                                       tAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGACAGCGGCGt                                                       >  1:768159/1‑143 (MQ=255)
                                                                                         aGTCGCAGGCGCTGTCCGCCACCGTGTCGCACCATTCCCCGCCGCGCTTACCTgcaccgacacggcgcagtcgctggcgcaacaatttgacgccttgaaagccgccgcccgtgaatgcggtccgttacccgatgagccgttta                                                     >  2:1204890‑M2/1‑53 (MQ=255)
                                                                                          gTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTgcacggacccggcgcagtcgctggcggaacaaattgacgccctgaaagccgccgcccgtgactgcggtccgttacccgatgagccgcttct                                                    <  2:516179‑M2/143‑92 (MQ=255)
                                                                                            tGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGACTATGACCCCACAGCGGCGTTcccc                                                  >  1:474943/1‑141 (MQ=255)
                                                                                              cAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTgcaccgacacggcgcagtcgctggcggaacaaattgacgccttgaaagccgccgcctgtgaatgcggtcccttacttgattagccgtgtattcac                                                <  1:982541‑M2/143‑96 (MQ=255)
                                                                                                  cgacggTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGACAGCGGCGTTCCGCAATCAg                                            <  2:308372/139‑1 (MQ=255)
                                                                                                     tGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTgcaccgacacggcgcagtcgctggcggaacaaattgacgccttgaaagccgccgcccgcgaatgcggtccgttacccgatgcgccgtctatccagctggcgc                                         <  2:229665‑M2/143‑103 (MQ=255)
                                                                                                     tGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTACCGTTAACCTGGAGTATGACCCGACAGCGGCGTTCCGCAATCAgggg                                         >  2:50242/1‑141 (MQ=255)
                                                                                                       gTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTgcaccgacacggcgcagtcgctggcggaacaaattgacgccttgaaagccgccgcccgtgaatgcggtccgttacccgatgaggcgcttctccacatggcgttt                                       <  2:376485‑M2/143‑105 (MQ=255)
                                                                                                         cGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTgcaccgacacggcgcagtcgctggcggaacaaattgacgccttgaaagccgccgcccgtgaatgcggtccgttacccgatgagccgtttattcagatggcgtttct                                     >  2:120132‑M2/1‑37 (MQ=255)
                                                                                                         cGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATCTGACCCGGCAGCGGCGTTCCGCAATCAGGTGGTGc                                     >  1:979287/1‑143 (MQ=255)
                                                                                                         cGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCACGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGACAGCGGCGATCCGCAATCAGGTGGTGc                                     >  1:801575/1‑143 (MQ=255)
                                                                                                           ccGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTCTCGTTAACCTGGAATATGACCCGCCAGCGGCGGTCCGCACTCAggaggttctt                                   >  1:998114/1‑139 (MQ=255)
                                                                                                             gACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGACAGCGGCGTTCCGCATTCAGCTGGTGCAttt                                 <  1:280639/143‑1 (MQ=255)
                                                                                                              ctggcgcGCCCCTTTCCCCGCTCGCTCACCTGCACCGTCGCCGAAGGCGGTCTCGAGCCCGTGGGAGATCCGCCATTTGGCGATTATCGTTAGCCTGGAATATGCCCCGACAGCGGCGTTCCGCAATCAGGTGGTGCATTTCg                               <  2:512077/137‑1 (MQ=255)
                                                                                                               cggggcGCACCATTCCCCGCTGCGCTTACCGGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGACAGCGGCGTTCCGCAATCAGGTGGTGCATTTCg                               <  1:259067/138‑1 (MQ=255)
                                                                                                               cGTGTCGCACCATTTCCCGCTGCGCTTACCTgaagcgacacggcgcagtcgctggcggaacaaattgacgccttgaaagccgccgcccgtgaatgcggtgcgttacccagtgagccggttattccgagggcgtttctttacct                               <  2:857489‑M2/143‑113 (MQ=255)
                                                                                                                   tCGCACCATTTCCCGCTGCGCTTACCTgcaccgacacggcgcagtcgctggcggaacaaattgacgccttgaaagccgccgcccgtgaatgcggtccgttacccgatgagccgtttattcagatggcgtttctttctctgcca                           >  2:1112487‑M2/1‑27 (MQ=255)
                                                                                                                   tCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGCCTATCGTCAACCTGGAACATGACCCGACAGCGGCGTTCCGCACTCGGGTGGTGCATTTCGAttt                           >  2:111799/1‑143 (MQ=255)
                                                                                                                     gCACCGTGTCCCGCTGCGCTTACCTGCGCCGATACGGTCGGCAGGCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGACAGCGGCGTTCCGCAATCAGGTGGTGCATTTCGATTTcc                         <  2:528374/143‑1 (MQ=255)
                                                                                                                     gCACCATTTCCCGCTGCGCTTACCTgcaccgacacggcgcagtcgctggcggaacaaattgacgccttgaaagccgccgcccgtgaatgcggtccgttacccgatgagccgtttattcagaaggcgtttctttctctgccagt                         <  2:920464‑M2/143‑119 (MQ=255)
                                                                                                                     gCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGACAGCGGCGTTCCGCAATCAGGTGGTGCATTTCGATTTcc                         >  1:619188/1‑143 (MQ=255)
                                                                                                                     gCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTCGCGCCTCTCGGCAACCTGGAATATGACCCGACAGCGGCGTTCCCCAATCAGCTGGTGCATTTCCATCTcc                         >  2:235016/1‑143 (MQ=255)
                                                                                                                      cACCATTTCCCGCTGCGCTTACCTgcaccgacacggcgcagtcgctggcggaacaaattgacgccttgaaagccgccgcccgtgaatgcggtccgttacccgatgagccgtttattcagatggcgtttctttctctgccagtg                        <  1:539619‑M2/143‑120 (MQ=255)
                                                                                                                      cACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGACAGCGGCGTTCCGCAATCCGGTGGTGCACTTCGATTTccc                        >  2:886064/1‑142 (MQ=255)
                                                                                                                      cACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGACAGCGGCGTTCCGCAATCAGGTGGTGCGTTTCGATTTCCg                        >  1:647880/1‑143 (MQ=255)
                                                                                                                       aCCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGACAGCGGCGTTCCGCAATCAGGTGGTGCATTTCGATTTCCGt                       <  1:851622/143‑1 (MQ=255)
                                                                                                                           tttCCCGCTGCGCTTACCTgcaccgacacggcgcagtcgctggcggaacaaattgacgccttgaaagccgccgcccgtgaatgcggtccgttacccgatgagccgtttattcagatggcgtttctttctctgccagtgatccc                   >  1:975185‑M2/1‑19 (MQ=255)
                                                                                                                              cccTCTGCGCGTACCTgcaccgacacggcgcagtcgctggcggaacaaattgacgccttgaaggccgccgcccgtgaatgcggtccgttacccgatgagacgtttattcagatggcgtttctttctctgccagtgatccccgc                >  2:818230‑M2/1‑16 (MQ=255)
                                                                                                                              cccGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCAGGGGCTTATCGTTAACCTGGGATATGACCGGACAGCGGCGTTACGCAACCAGGTGGGGCATTGCGAATACCGTGAGCTgg                >  2:1039235/1‑143 (MQ=255)
                                                                                                                                cGCTGCGCTTACCTgcaccgacacggcgcagtcgctggcggaacaaattgacgccttgaaagccgccgcccgtgaacgcggtagctccgccgatgagccgtttattcagaaggcgtttctttctctgccagtgatacccgcgc              <  1:876260‑M2/143‑130 (MQ=255)
                                                                                                                                     cgcTTACCTgcaccgagacggcgcagtcgctggcggaacaaattgacgccttgaaagccgccgcccgtgaatgcggtccgctacccgatgagccgtttattcagctggagtttccttctctgccagtgatccccgcgctaaaa         >  2:427765‑M2/1‑9 (MQ=255)
                                                                                                                                        ttACCTgcaccgacacggcgcagtcgctggcggaacaaattgacgccttgaaagccgccgcccgtgaatgcggtccgtttcccgctgtgccgtttattcagttgtcgtttctttctctgccagtgctcccctcgctaaaacta      <  1:252459‑M2/143‑138 (MQ=255)
                                                                                                                                        ttACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATTCGCAATCTGGCGATTATCGTTAACCTGGAATATGACCCGACAGCGGCGTTCCGCAATCAGGTGGTGCATTTCGATTTCCGTAAGCTGGATGTCTTCAg      >  1:332573/1‑143 (MQ=255)
                                                                                                                                          aCCTgtacctacactgctcagtcgctggcggaacaaattgacgccttcaaagccgccgcccgttaatgcggtccgttacccgatgagccgtttattcagatggcgtttctttctctgccagtgatccccgcgctaaaactaac    >  1:80258‑M2/1‑4 (MQ=255)
                                                                                                                                            cTgcaccgacacggcgcagtcgctggcggaacaaattgacgccttgaaagccgccgcccgtgaatgcggtccgttacccgatgagccgtttattcagatggcgtttctttctctgccagtgatccccgcgctgaacctaccca  <  1:960276‑M2/143‑142 (MQ=255)
                                                                                                                                            cTGCACCGACACCGAAGGCGCCCTAAAGCCCATGTGAGATCCGCCAGCTGGCGATTAGCGTCAACCTGGGATATGGCCCGACAGCGGCGTTCCGCAGTCAGGTGGTGCGTGTCGATCTCCGTACGCTGGAGGTCGTCGGCtgg  >  2:535710/1‑141 (MQ=255)
                                                                                                                                             |                                                                                                                                             
TAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGACAGCGGCGTTCCGCAATCAGGTGGTGCATTTCGATTTCCGTAAGCTGGATGTCTTCAGCTTT  >  NC_000913/3992619‑3992901

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.