Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	NC_000913	3,815,859	Δ82 bp		[rph]–[rph]	[rph], [rph]

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	3815859	3815940	82	67 [0]	[0] 67	[rph]–[rph]	[rph],[rph]

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3815858	0 (0.000)	63 (1.020)	50/264	0.2	100%	pseudogene (24/48 nt)	rph	ribonuclease PH (defective);enzyme; Degradation of RNA; RNase PH
	?	NC_000913	3815941 =	0 (0.000)					pseudogene (609/669 nt)	rph	ribonuclease PH (defective);enzyme; Degradation of RNA; RNase PH

ACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTC  >  NC_000913/3815717‑3816000                                                                                                                                              |                                                                                                                                               acccctgcTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTCCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCc                                                                                                                                               <  1:463892‑M1/140‑2 (MQ=255) acacCTGCGTGCTCAGCGCAAATCCACTAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTCGCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCc                                                                                                                                               <  1:508232‑M1/143‑2 (MQ=255)  cacCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcg                                                                                                                                              >  1:577718‑M1/1‑141 (MQ=255)     cTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAACTCAGTTTACCAGCGCCGCCTTCTCCcgtcc                                                                                                                                           >  2:581366‑M1/1‑138 (MQ=255)     cTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcc                                                                                                                                           >  1:519417‑M1/1‑138 (MQ=255)      tgcttgctAAGCGCAAATTCAATAACCTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtccc                                                                                                                                          <  1:9648‑M1/143‑7 (MQ=255)        tttgctaTCCGCAACTTCAATTAGCTGGCGCTGATTTGTTTTCATGCCTTCGCTCCGCATCTTACGTTTCTTCAGACAAATAACAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccct                                                                                                                                        <  2:417092‑M1/142‑9 (MQ=255)           gctACGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgca                                                                                                                                     <  1:538909‑M1/143‑12 (MQ=255)              aaGCGCAAATTCAATAAACTGGAGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGCTTGCCAGCGCCGCCTTCTGCcctcccctccactt                                                                                                                                  >  2:820704‑M1/1‑129 (MQ=255)                gcgcAAATTCAGTAAACTGGCGCTCATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttca                                                                                                                                <  1:452061‑M1/143‑17 (MQ=255)                 cgcAACTTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaa                                                                                                                               <  1:731877‑M1/143‑18 (MQ=255)                 cgcAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaa                                                                                                                               >  1:726152‑M1/1‑126 (MQ=255)                    aaaTTTCATAAACTGGCGCGGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatga                                                                                                                            <  2:285239‑M1/143‑21 (MQ=255)                    aaaTTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatga                                                                                                                            >  1:1059942‑M1/1‑123 (MQ=255)                     aaTTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCCGTCGCCTTAAAAATCATTTTGCCAGCGCCGCCTTCTGCcgtccactgcacttcaatgat                                                                                                                           >  1:292272‑M1/1‑122 (MQ=255)                           atgtgctggcgCTGATATGGTTTCATGCATGTTCTCTGCATCCCACTCTGCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgccc                                                                                                                     <  2:576476‑M1/138‑28 (MQ=255)                           aTAATCTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtctcctgcacttcaatgatgcgccc                                                                                                                     <  2:1054986‑M1/143‑28 (MQ=255)                           aTAAAGTGGCGCTGATATGGTTTCATGCCTGCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgccc                                                                                                                     <  1:409379‑M1/143‑28 (MQ=255)                            tAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccg                                                                                                                    >  1:35652‑M1/1‑115 (MQ=255)                              aaCTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctacacctccacgatgcgcccgac                                                                                                                  >  2:146322‑M1/1‑113 (MQ=255)                                 tGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttc                                                                                                               <  2:27475‑M1/143‑34 (MQ=255)                                  ggCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcg                                                                                                              <  1:222045‑M1/143‑35 (MQ=255)                                      cTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAACGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatcatgcgcccgtcttcggtca                                                                                                          >  2:141350‑M1/1‑105 (MQ=255)                                      cTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgagcccgtcttcggtca                                                                                                          >  2:139939‑M1/1‑105 (MQ=255)                                        gATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAGAAAAAGGCGACTCAGCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatc                                                                                                        <  1:275160‑M1/143‑41 (MQ=255)                                          tatGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcactgctgctcccgtcttccgtcatcac                                                                                                      >  1:1028166‑M1/1‑101 (MQ=255)                                          tatGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatacgcccgccttcggtcatccc                                                                                                      >  1:523182‑M1/1‑101 (MQ=255)                                                   aTGCCTTCGCTCCTCAACTTACTTTTCGACAGACAAAAAAAAGGCGACTCATCGGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcat                                                                                             <  2:615377‑M1/143‑52 (MQ=255)                                                              cctcATCTTACTTCTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctg                                                                                  <  2:44070‑M1/143‑63 (MQ=255)                                                                tcATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTGAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcg                                                                                <  2:1119405‑M1/143‑65 (MQ=255)                                                                 cATCTTACTTTTCTACAGACAAAAAACAGGCGACTCCTCCGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcgg                                                                               <  1:14179‑M1/143‑66 (MQ=255)                                                                     ttACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTGGTCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcaga                                                                           <  2:1017205‑M1/143‑70 (MQ=255)                                                                     ttACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactccgttcatgccggtctctgcggcaga                                                                           >  1:414888‑M1/1‑74 (MQ=255)                                                                     ttACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggccatcactacgttcatgtcggtctctgcggcagg                                                                           >  1:574606‑M1/1‑74 (MQ=255)                                                                     gtaCTTGTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcaga                                                                           <  2:950387‑M1/142‑70 (MQ=255)                                                                         ttttCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtct                                                                       >  2:84319‑M1/1‑70 (MQ=255)                                                                         ttttCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtccactgcagacctatgatgcgcgcgtcttcggacatcactacgttcatgtcggtctctgcggcagagtct                                                                       >  1:444986‑M1/1‑70 (MQ=255)                                                                           ttCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttc                                                                     <  1:1013139‑M1/143‑76 (MQ=255)                                                                            tCTACACACAAAAACACGGCGACTTATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcttcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttca                                                                    <  2:114918‑M1/143‑77 (MQ=255)                                                                              tACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagcgtcttcaac                                                                  >  1:1093346‑M1/1‑65 (MQ=255)                                                                                   aCAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcgcctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagaggcttcaacgtatt                                                             >  1:66839‑M1/1‑60 (MQ=255)                                                                                   aCAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtatt                                                             <  1:855598‑M1/143‑84 (MQ=255)                                                                                   aCAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcacgacgttcatgtcggtctctgcggcagagtcttcaacgtatt                                                             >  1:64001‑M1/1‑60 (MQ=255)                                                                                      aaaaaaaGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcgatcatcactacgttcatgtaggtctctgcggcagagtcttcaacgtattcca                                                          >  1:1056289‑M1/1‑57 (MQ=255)                                                                                        aaaaaGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctacactgcaatgatgcgcccgtctccggccatcactccgttcatgtcggtctctgcggcagagcctccaacgtgttcccga                                                        >  2:17674‑M1/1‑55 (MQ=255)                                                                                         aaaaGGCGGCTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagat                                                       <  2:888908‑M1/143‑90 (MQ=255)                                                                                                gACTCTTCAGTCGCCTTAACAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaac                                                <  2:875504‑M1/143‑97 (MQ=255)                                                                                                gACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgtgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaac                                                <  2:753314‑M1/143‑97 (MQ=255)                                                                                                     atcaGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgctt                                           >  1:369882‑M1/1‑42 (MQ=255)                                                                                                      tccgtcgCCTTAAAAATCAGGTTGCCAGCGCCGGCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttc                                          <  2:1015588‑M1/140‑103 (MQ=255)                                                                                                      gcagTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttc                                          <  1:1001625‑M1/142‑103 (MQ=255)                                                                                                         gTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgcc                                       <  1:621987‑M1/143‑106 (MQ=255)                                                                                                            gCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaacctcttcgccgtt                                    >  1:437637‑M1/1‑35 (MQ=255)                                                                                                                 aaaaaTCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgctgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgccgttcacaa                               <  1:1023185‑M1/143‑114 (MQ=255)                                                                                                                    aaTCAGTTTGCCAGCGCCGCCTTCTGCcgtcccccgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatcccactctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgccgttcacaattc                            <  1:391487‑M1/143‑117 (MQ=255)                                                                                                                     aTCAGTTTGCCAGCGCCGCCTTCTGCcgtcacctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcgggctctgcggcagagtcttcaacgtattccagatcgcaaacggctttgcggtgcagaattcc                           >  1:454061‑M1/1‑26 (MQ=255)                                                                                                                       cgggttcccagggcccCCTTCCGCcgtcccctgcactgcgatgatgcgcccgtcttccgtcatcactacgctcatggcgggctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgccgttcacaattccga                         <  2:1199508‑M1/136‑120 (MQ=255)                                                                                                                       cAGTTTGCCAGCGCCGCTTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcacgacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgccgttcacaattccga                         <  1:567150‑M1/143‑120 (MQ=255)                                                                                                                          tttGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttccacgtattcctgttcgcaaacagcttcgcctttcaaaattaccacag                      >  1:135505‑M1/1‑21 (MQ=255)                                                                                                                              ccAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgccgttcacaattccgacagaaac                  >  1:770441‑M1/1‑17 (MQ=255)                                                                                                                               cAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcacgacttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtatgccagatcacagaccgcttggccgttcacaaatcagacggagaac                 >  2:83944‑M1/1‑16 (MQ=255)                                                                                                                                aGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttgggtcatcactacgttcctgtgggtcgctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgccgttcacacttccgccaggacctg                >  1:92761‑M1/1‑15 (MQ=255)                                                                                                                                  ccccccctcctcccgtccccggcacctcaatcgtccccccgtcttcggtcctcactaccttcatgtcggtctctgcggcagagtcttcaacgtatcccagatcgcaaaccgcctcgccgttcacaattccgacagaaactgcg              <  2:1021725‑M1/138‑131 (MQ=255)                                                                                                                                   gccgccTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgccgttcacaattccgacagaaactgcgg             <  1:203980‑M1/143‑132 (MQ=255)                                                                                                                                     cgccTTCTGCcgtcccctgcacttcaaggatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgccgttcacaattccgacagaaactgcggct           <  1:767398‑M1/143‑134 (MQ=255)                                                                                                                                             gCcgtcccatgcacttgattgatgcgtccgtcttcggtcatcactccgttcatgtcggtcgctgcggcagagtcttcaacgtattccagatcgcaacccgcttcgccgttcacaatttcgacagaaactgcggctaccatccc   <  2:1114792‑M1/143‑142 (MQ=255)                                                                                                                                              ccgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgccgttcacaattccgacagaaactgcgcctaccatccct  >  1:896186‑M1/1‑1 (MQ=255)                                                                                                                                              |                                                                                                                                               ACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTC  >  NC_000913/3815717‑3816000

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑