Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	NC_000913	3,815,859	Δ82 bp		[rph]–[rph]	[rph], [rph]

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	3815859	3815940	82	67 [0]	[0] 67	[rph]–[rph]	[rph],[rph]

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3815858	0 (0.000)	63 (1.020)	50/264	0.2	100%	pseudogene (24/48 nt)	rph	ribonuclease PH (defective);enzyme; Degradation of RNA; RNase PH
	?	NC_000913	3815941 =	0 (0.000)					pseudogene (609/669 nt)	rph	ribonuclease PH (defective);enzyme; Degradation of RNA; RNase PH

ACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCT  >  NC_000913/3815799‑3816082                                                                                                                                               |                                                                                                                                              acccctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttactttcctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcc                                                                                                                                               <  1:463892‑M2/1‑1 (MQ=255) acacctgcgtgctcagcgcaaatccactaaactggcgctgatatggtttcatgccttcgctcctcatcttacttcgctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcc                                                                                                                                               <  1:508232‑M2/1‑1 (MQ=255)  cacctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCg                                                                                                                                              >  1:577718‑M2/142‑143 (MQ=255)     ctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaactcagtttaccagcgccgccttctccCGTcc                                                                                                                                           >  2:581366‑M2/139‑143 (MQ=255)     ctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTcc                                                                                                                                           >  1:519417‑M2/139‑143 (MQ=255)      tgcttgctaagcgcaaattcaataacctggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTccc                                                                                                                                          <  1:9648‑M2/6‑1 (MQ=255)        tttgctatccgcaacttcaattagctggcgctgatttgttttcatgccttcgctccgcatcttacgtttcttcagacaaataacaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCt                                                                                                                                        <  2:417092‑M2/8‑1 (MQ=255)           gctacgcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCa                                                                                                                                     <  1:538909‑M2/11‑1 (MQ=255)              aagcgcaaattcaataaactggagctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagcttgccagcgccgccttctgcCCTCCCCTCCACtt                                                                                                                                  >  2:820704‑M2/130‑143 (MQ=255)                gcgcaaattcagtaaactggcgctcatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCa                                                                                                                                <  1:452061‑M2/16‑1 (MQ=255)                 cgcaacttcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCaa                                                                                                                               <  1:731877‑M2/17‑1 (MQ=255)                 cgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCaa                                                                                                                               >  1:726152‑M2/127‑143 (MQ=255)                    aaatttcataaactggcgcggatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAatga                                                                                                                            <  2:285239‑M2/20‑1 (MQ=255)                    aaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAatga                                                                                                                            >  1:1059942‑M2/124‑143 (MQ=255)                     aattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatccgtcgccttaaaaatcattttgccagcgccgccttctgcCGTCCACTGCACTTCAatgat                                                                                                                           >  1:292272‑M2/123‑143 (MQ=255)                           atgtgctggcgctgatatggtttcatgcatgttctctgcatcccactctgctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGccc                                                                                                                     <  2:576476‑M2/27‑1 (MQ=255)                           ataatctggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCTCCTGCACTTCAATGATGCGccc                                                                                                                     <  2:1054986‑M2/27‑1 (MQ=255)                           ataaagtggcgctgatatggtttcatgcctgcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGccc                                                                                                                     <  1:409379‑M2/27‑1 (MQ=255)                            taaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCg                                                                                                                    >  1:35652‑M2/116‑143 (MQ=255)                              aactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTACACCTCCACGATGCGCccgac                                                                                                                  >  2:146322‑M2/114‑141 (MQ=255)                                 tggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTc                                                                                                               <  2:27475‑M2/33‑1 (MQ=255)                                  ggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCg                                                                                                              <  1:222045‑M2/34‑1 (MQ=255)                                      ctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaacggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATCATGCGCCCGTCTTCGGtca                                                                                                          >  2:141350‑M2/106‑143 (MQ=255)                                      ctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGAGCCCGTCTTCGGtca                                                                                                          >  2:139939‑M2/106‑143 (MQ=255)                                        gatatggtttcatgccttcgctcctcatcttacttttctacagacaagaaaaaggcgactcagcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGtcatc                                                                                                        <  1:275160‑M2/40‑1 (MQ=255)                                          tatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCACTGCTGCTCCCGTCTTCCGTCATCAc                                                                                                      >  1:1028166‑M2/102‑143 (MQ=255)                                          tatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATACGCCCGCCTTCggtcatccc                                                                                                      >  1:523182‑M2/102‑141 (MQ=255)                                                   atgccttcgctcctcaacttacttttcgacagacaaaaaaaaggcgactcatcggtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCAt                                                                                             <  2:615377‑M2/51‑1 (MQ=255)                                                              cctcatcttacttctctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTg                                                                                  <  2:44070‑M2/62‑1 (MQ=255)                                                                tcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgcctgaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCg                                                                                <  2:1119405‑M2/64‑1 (MQ=255)                                                                 catcttacttttctacagacaaaaaacaggcgactcctccgtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCgg                                                                               <  1:14179‑M2/65‑1 (MQ=255)                                                                     ttacttttctacagacaaaaaaaaggcgactcatcagtggtcttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCaga                                                                           <  2:1017205‑M2/69‑1 (MQ=255)                                                                     ttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTCCGTTCATGCCGGTCTCTGCGGCaga                                                                           >  1:414888‑M2/75‑143 (MQ=255)                                                                     ttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGCCATCACTACGTTCATGTCGGTCTCTGCGGcagg                                                                           >  1:574606‑M2/75‑142 (MQ=255)                                                                     gtacttgtctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCaga                                                                           <  2:950387‑M2/69‑1 (MQ=255)                                                                         ttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCt                                                                       >  2:84319‑M2/71‑143 (MQ=255)                                                                         ttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCACTGCAGACCTATGATGCGCGCGTCTTCGGACATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCt                                                                       >  1:444986‑M2/71‑143 (MQ=255)                                                                           ttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTc                                                                     <  1:1013139‑M2/75‑1 (MQ=255)                                                                            tctacacacaaaaacacggcgacttatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCTTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCa                                                                    <  2:114918‑M2/76‑1 (MQ=255)                                                                              tacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGCGTCTTCAAc                                                                  >  1:1093346‑M2/66‑143 (MQ=255)                                                                                   acaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCGCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGGCTTCAACGTAtt                                                             >  1:66839‑M2/61‑143 (MQ=255)                                                                                   acaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTAtt                                                             <  1:855598‑M2/83‑1 (MQ=255)                                                                                   acaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACGACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTAtt                                                             >  1:64001‑M2/61‑143 (MQ=255)                                                                                      aaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGATCATCACTACGTTCATGTAGGTCTCTGCGGCAGAGTCTTCAACGTATTCCa                                                          >  1:1056289‑M2/58‑143 (MQ=255)                                                                                        aaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTACACTGCAATGATGCGCCCGTCTCCGGCCATCACTCCGTTCATGTCGGTCTCTGCGGCAGAGCCTCCAACGTGTTCCCGa                                                        >  2:17674‑M2/56‑143 (MQ=255)                                                                                         aaaaggcggctcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGAt                                                       <  2:888908‑M2/89‑1 (MQ=255)                                                                                                gactcttcagtcgccttaacaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAAc                                                <  2:875504‑M2/96‑1 (MQ=255)                                                                                                gactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGTGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAAc                                                <  2:753314‑M2/96‑1 (MQ=255)                                                                                                     atcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCtt                                           >  1:369882‑M2/43‑143 (MQ=255)                                                                                                      tccgtcgccttaaaaatcaggttgccagcgccggcttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTc                                          <  2:1015588‑M2/102‑1 (MQ=255)                                                                                                      gcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTc                                          <  1:1001625‑M2/102‑1 (MQ=255)                                                                                                         gtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGcc                                       <  1:621987‑M2/105‑1 (MQ=255)                                                                                                            gccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCTCTTCGCCGtt                                    >  1:437637‑M2/36‑143 (MQ=255)                                                                                                                 aaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGCTGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACaa                               <  1:1023185‑M2/113‑1 (MQ=255)                                                                                                                    aatcagtttgccagcgccgccttctgcCGTCCCCCGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATCCCACTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTc                            <  1:391487‑M2/116‑1 (MQ=255)                                                                                                                     atcagtttgccagcgccgccttctgcCGTCACCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGGCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACGGCTTTGCGGTGCAGAATTcc                           >  1:454061‑M2/27‑143 (MQ=255)                                                                                                                       cgggttcccagggcccccttccgcCGTCCCCTGCACTGCGATGATGCGCCCGTCTTCCGTCATCACTACGCTCATGGCGGGCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGa                         <  2:1199508‑M2/119‑1 (MQ=255)                                                                                                                       cagtttgccagcgccgctttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACGACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGa                         <  1:567150‑M2/119‑1 (MQ=255)                                                                                                                          tttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCCACGTATTCCTGTTCGCAAACAGCTTCGCCTTTCAAAATTACCACAg                      >  1:135505‑M2/22‑143 (MQ=255)                                                                                                                              ccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAAc                  >  1:770441‑M2/18‑143 (MQ=255)                                                                                                                               cagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCACGACTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATGCCAGATCACAGACCGCTTGGCCGTTCACAAATCAGacggagaac                 >  2:83944‑M2/17‑139 (MQ=255)                                                                                                                                agcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTGGGTCATCACTACGTTCCTGTGGGTCGCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACACTTCCGCCAGGACCTg                >  1:92761‑M2/16‑143 (MQ=255)                                                                                                                                  ccccccctcctccCGTCCCCGGCACCTCAATCGTCCCCCCGTCTTCGGTCCTCACTACCTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATCCCAGATCGCAAACCGCCTCGCCGTTCACAATTCCGACAGAAACTGCg              <  2:1021725‑M2/130‑1 (MQ=255)                                                                                                                                   gccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCgg             <  1:203980‑M2/131‑1 (MQ=255)                                                                                                                                     cgccttctgcCGTCCCCTGCACTTCAAGGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCt           <  1:767398‑M2/133‑1 (MQ=255)                                                                                                                                             gcCGTCCCATGCACTTGATTGATGCGTCCGTCTTCGGTCATCACTCCGTTCATGTCGGTCGCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAACCCGCTTCGCCGTTCACAATTTCGACAGAAACTGCGGCTACCATccc   <  2:1114792‑M2/141‑1 (MQ=255)                                                                                                                                              cCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGCCTACCATCCCt  >  1:896186‑M2/2‑143 (MQ=255)                                                                                                                                               |                                                                                                                                              ACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCT  >  NC_000913/3815799‑3816082

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑