Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 2,313,540 Δ2 bp :: IS186 (+) +6 bp coding (53‑58/2673 nt) rcsD → phosphotransfer intermediate protein in two‑component regulatory system with RcsBC

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2313540 =0 (0.000)79 (1.080) 65/276 0.1 100% coding (53/2673 nt) rcsD phosphotransfer intermediate protein in two‑component regulatory system with RcsBC
?NC_000913 = 2515617 NA (NA)noncoding (1345/1345 nt) IS186 repeat region
* ? NC_000913 = 23135450 (0.000)78 (1.050) 64/280 0.1 100% coding (58/2673 nt) rcsD phosphotransfer intermediate protein in two‑component regulatory system with RcsBC
?NC_000913 2514275 = NA (NA)noncoding (3/1345 nt) IS186 repeat region

AGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATAGCGCCTGCTGCTGTTGCGTCTCGACAAACTCCGCGACCACACT  >  NC_000913/2515478‑2515756
                                                                                                                                            |                                                                                                                                           
aGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATaa                                                                                                                                          >  2:575223/1‑143 (MQ=31)
       cggTGGCCATGCGTGGGACAGTATCCCTGACGGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCg                                                                                                                                   <  1:538620/142‑1 (MQ=25)
       aGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCg                                                                                                                                   <  1:809965/143‑1 (MQ=35)
       aGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATACCCCg                                                                                                                                   <  1:1154659/143‑1 (MQ=21)
       aGGTGGCCATGCGTGGGACAGCATTCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCg                                                                                                                                   <  1:849377/143‑1 (MQ=255)
         gttgcgaTTCGGGGGACAGTGTCCCTTTCATCCTCAATGACGAAATGTAAGGACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGt                                                                                                                                 <  2:470318/137‑1 (MQ=11)
         gTGGCCACTCGTGGGACAGCATCCCTCGCCGCCTACCACTCGTGTTGCATGGACGCGAGGCATCGTCTGAAGGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGt                                                                                                                                 <  2:470103/143‑1 (MQ=11)
          tGGCCATTCGGGGGACAGTATCCCTGACAGCCTACAACACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGtt                                                                                                                                <  1:1306614/143‑1 (MQ=255)
            gCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGtttt                                                                                                                              >  1:1296905/1‑143 (MQ=38)
              cactCGTGGGACAGTATCCGTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGtttttt                                                                                                                            <  1:1157012/140‑1 (MQ=255)
                 tCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCGTTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTAc                                                                                                                         >  2:816816/1‑143 (MQ=255)
                    tGGGACAGCATCCCTGACAGCCTACAAAACGCAATGGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTATCTAGACAATATGTGGATAATTCCCCGGTTTTTTTACGcc                                                                                                                      <  2:420643/143‑1 (MQ=14)
                     gggACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCt                                                                                                                     <  1:31591/143‑1 (MQ=255)
                      ggACAGTATCCCTGACAGCCTATAAAACAGAAGCGACGAACGCGAGTCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGTTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTg                                                                                                                    <  2:45279/143‑1 (MQ=17)
                       gACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTCAGTTAGCGCTTATGGGATATTTCCCCGGTTTTTTTACGCgtgt                                                                                                                   >  2:849968/1‑143 (MQ=255)
                        aCAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGtt                                                                                                                  >  2:1284321/1‑143 (MQ=255)
                         cAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGttc                                                                                                                 >  1:889257/1‑142 (MQ=255)
                          aGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTACGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTaa                                                                                                                >  1:21665/1‑143 (MQ=255)
                            tATCCCTGACAGCCTACAAAACGCAATTGAAATACCTCTAGCGTCTGCGTAACGAGGCACCGAGGCGTGGCGGTCTCCAGACTGTTCAACCCTTCAGTGAGCGCTTATGGGATAATTCCCCGGTCGTTTTACGCGTGttggtt                                                                                                              >  2:824497/1‑139 (MQ=9)
                             aTCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCa                                                                                                             <  2:235723/143‑1 (MQ=255)
                              tCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACAGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATGCCCCGGTTTTTTTCAGCCCGTTAATTAg                                                                                                            >  2:674955/1‑143 (MQ=14)
                               cccTGACAGCCTACAAAGCGCAAGTGAAGGACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTTAGTTAGCGCTTATGGGATCATTCCCCGGTTTTTTTACGCCTGTTAATCAGc                                                                                                           <  2:716210/143‑1 (MQ=17)
                                ccTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATCCTTCAGATGGGTCAACCCTTAAGCTAGCGCCTATGGGATACTTCCCCGGTACTTTTACGCCTGTCAAACGGCt                                                                                                          >  2:457832/1‑143 (MQ=14)
                                ccTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCAGCGGCGTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCt                                                                                                          >  1:935650/1‑143 (MQ=255)
                                    gcAGCCGACGCAACTCAAGTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGGCGCATTCTTCAGATGGTTCAGCCCTTAAGTGAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATg                                                                                                      <  2:1169528/142‑1 (MQ=18)
                                     cAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCACCCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATgg                                                                                                     <  1:97154/143‑1 (MQ=255)
                                      aGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATCGGATAATTCCCCGGTTTTTTTTCGTGCGATTATCAGCTAATgga                                                                                                    >  2:724291/1‑142 (MQ=14)
                                        ccTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATGCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTg                                                                                                  >  1:395583/1‑143 (MQ=255)
                                         cTACAGAACGCAATCGGAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTGCAACCCTTAGGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGc                                                                                                 <  2:524235/143‑1 (MQ=18)
                                         cTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGc                                                                                                 >  1:669383/1‑143 (MQ=255)
                                          tACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCCTTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGAGATAATTCCCCGGCTCTTTTACGTCTGTTGATCAGCTAATGGCTGCg                                                                                                >  2:433462/1‑143 (MQ=17)
                                          tACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTAATCCTTTTAATCAGCTAATGGATGCg                                                                                                >  2:806978/1‑143 (MQ=255)
                                           aCAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTATTCGGCTAATGGCTGCgg                                                                                               >  2:56670/1‑143 (MQ=255)
                                               aaCGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGGGGCGTCGCATTCTTCAGCTGGTTCAACCCTTAAGTTCGCGCTTCTGGGCTTGTTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGcaa                                                                                           >  1:378426/1‑141 (MQ=18)
                                               aaCGCAATTCAAGAACGCGACGCCTCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGa                                                                                           <  1:758303/143‑1 (MQ=255)
                                                aCGCAATTGAAGAACGCGTGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGAc                                                                                          <  2:943749/143‑1 (MQ=255)
                                                  gCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACTCCTCTTAATCCGCTCATGGCTTCGGTCAAccc                                                                                        >  2:590533/1‑142 (MQ=17)
                                                         aagaaCGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCCACCCTTACGTTACCGCTTATGGGATAATTCCCCGGCTCTTTTCCGCCTGTCCCTCCCCCAATCGCTGCGGGCCTCCCCTCAAAt                                                                                 >  2:9480/1‑143 (MQ=14)
                                                         aagaaCGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAACTAATGACTGCGGGCGACCAATCAAAt                                                                                 >  1:549876/1‑143 (MQ=255)
                                                         aagaaCGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCGGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAAt                                                                                 >  1:338647/1‑143 (MQ=255)
                                                            aaCGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCCAATAcc                                                                              >  1:735734/1‑143 (MQ=255)
                                                            aaCGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATAcc                                                                              >  1:736072/1‑143 (MQ=255)
                                                             aCGCGAGGCATCGTCTCAACGAGGCACCGAGGCGTCGCATGCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATAccc                                                                             <  1:810156/143‑1 (MQ=255)
                                                               gcgAGGCATCGTCTTAACGATGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCtt                                                                           <  2:836066/143‑1 (MQ=255)
                                                               gcgAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCtt                                                                           >  2:765550/1‑143 (MQ=255)
                                                                cgAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTg                                                                          <  1:385722/143‑1 (MQ=255)
                                                                 gAGGCATCGTCGTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGc                                                                         <  1:490265/143‑1 (MQ=255)
                                                                       tCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGAGATTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATAGCCTTGCAGatat                                                                   >  1:613003/1‑143 (MQ=255)
                                                                             tAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCAcc                                                             <  1:673617/143‑1 (MQ=255)
                                                                                 gAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTCGCGCTAATGGGAGAATTCCCCGGCTTTTTTACGCCTGTTAATTCGATAATGCCCGCAGGCTACAAATAAAATACCCTAGGAAATAGTGCAaccgca                                                         >  2:971227/1‑140 (MQ=12)
                                                                                  aGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAg                                                        >  1:1005573/1‑143 (MQ=255)
                                                                                  aGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATAACCCGGTTTTTTTACGCCTGTTAATCAGCTACTTACTGCGGGCCACCCATCAAATACCCCTGAATATCTTACACCCCGaa                                                        >  2:561698/1‑142 (MQ=21)
                                                                                  aGGCACCGAGGCGTCGCATTCTGCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAg                                                        <  1:1240578/143‑1 (MQ=255)
                                                                                    gCACCGCGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTTTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCt                                                      <  1:336926/143‑1 (MQ=255)
                                                                                    gCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTCATGGCTGCGGGCGACCAATCAAATACCCTTGCACATATTGCACCCCGACCt                                                      >  2:703832/1‑143 (MQ=255)
                                                                                        cGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATg                                                  >  1:1008407/1‑143 (MQ=255)
                                                                                         gAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGc                                                 >  1:926890/1‑143 (MQ=255)
                                                                                             cGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAGTGCCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATa                                             >  2:1182037/1‑143 (MQ=255)
                                                                                             cGTCGCATTCTTCAGATGGTTCAACCACTACGTTACCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATa                                             <  1:1284321/143‑1 (MQ=255)
                                                                                              gTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATAg                                            >  1:177566/1‑143 (MQ=255)
                                                                                                 gCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATAgcgc                                         <  1:765550/143‑1 (MQ=255)
                                                                                                  cATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATGATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATAGCGcc                                        <  2:1049047/143‑1 (MQ=255)
                                                                                                       ttcAGATGGTTCCACCCCTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATCCCATTGCACTTATTGCACCCCGAGCTTATGCAATAGCGCctgctg                                   <  1:704911/143‑1 (MQ=39)
                                                                                                        tcAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATAGCGCctgctgc                                  >  1:135680/1‑143 (MQ=255)
                                                                                                         cAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATAGCGCctggtgct                                 >  2:690352/1‑143 (MQ=255)
                                                                                                          aGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCCGCTCATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCGATGCCGGctgctgctg                                >  1:56022/1‑143 (MQ=38)
                                                                                                           gATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATAGCGCCTGCTGCTGt                               >  1:97395/1‑143 (MQ=255)
                                                                                                           gATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGAGACCAATGATATACCCGTGCAGATATTGCACCCCGAGCTTATGAAATAGCACctgctgcagc                               >  2:474675/1‑140 (MQ=38)
                                                                                                             tGGTTCTTCCCTTAAGTTAGCGCTTATTGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATAGCGCCTGCTGCTGTTg                             <  2:172530/143‑1 (MQ=255)
                                                                                                                ttCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATAGCGCCTGCTGCTGTTGCGt                          >  1:1298886/1‑143 (MQ=255)
                                                                                                                  cAACCCTTACGTGAGCGCGTATGGGAGAATTCCCCGGTGTTTTTACCCCTGTTAATCAGCTAATGGCTGCTGGCGACCACTCAAATACCCTTGCACATATTGCACCCCTAGCTTATGCAATAGCGCCTGCTGCTGTTGCGtct                        <  2:301672/143‑1 (MQ=255)
                                                                                                                   aaCCCGTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATAGCGCCTGCTGCTGTTGCGtctc                       <  1:136042/143‑1 (MQ=255)
                                                                                                                    ccgctgcaGTTAGCTCTTATGCTGTAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCACATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATAGCGCCTGCTGCTGTTGCGTCTCg                      <  2:881352/136‑1 (MQ=255)
                                                                                                                    agccTTAAGTTCGCGCTGATGGGATAATTCCCCGGGTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAAGACCCTTGCAGATATTGCACCCCGAGCTTATGCAATAGCGCCTGCTGCTGTTGCGTCTCg                      <  2:718735/141‑1 (MQ=255)
                                                                                                                     cccTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATAGCGCCTGCTGCTGTTGCGTCTCGa                     <  2:1296905/143‑1 (MQ=255)
                                                                                                                     cccTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATAGCGCCTGCTGCTGTTGCGTCTCGa                     <  2:1220809/143‑1 (MQ=255)
                                                                                                                       cTTAAGTTAGCGCTTATGGGATAATTCCCCGGGTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCCACCAATCCAATACCCTTGCAGTTATTGCACCCCGATATTATGCAATTGCTCCTGCTGCAGCTGCGTCACTACa                   >  2:176113/1‑143 (MQ=255)
                                                                                                                         cacttcaGCGCTGCTGCGATACTCGCCCGGTTTCTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCTACTAATCAACTACCCTTGCTGATCTTGCACCCCGAGCTTATGCAATAGCGCCTGCTGCTGTTGCGTCTCGACaaa                 <  1:818120/137‑1 (MQ=255)
                                                                                                                            gTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCATGTTAATCAGCTAATGGCTGCGGTCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCATTAGCGCCTGCTGCTGTTGGTTCTCGCCAAACTc              >  2:804753/1‑143 (MQ=255)
                                                                                                                             gtAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATAGCGCCTGCTGCTGTTGCGTCTCGACAAACTcc             <  2:378426/142‑1 (MQ=255)
                                                                                                                              tggcgcTGAGGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATAGCGCCTGCTGCTGTTGCGTCTCGACAAACTCcg            <  2:338647/141‑1 (MQ=255)
                                                                                                                               aGCGCTTATGGGAGAGTTCCCCGGTGTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCCAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATAGCGCCTGCTGCTGTTGCGTCTCGACAAACTCcgc           <  2:131106/143‑1 (MQ=255)
                                                                                                                               aGCGCTTATAGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATAGCGCCTGCTGCTGTTGCGTCTCGACAAACTCcgc           <  1:289857/143‑1 (MQ=255)
                                                                                                                                gcgcTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCATATGCAATCGGGCCTGCTGCTGTTACGTCTCGAAAAACTCagcg          >  1:46127/1‑143 (MQ=255)
                                                                                                                                 cgcTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATAGCGCCTGCTGCTGTTGCGTCTCGACAAACTCCGCGa         <  1:816816/143‑1 (MQ=255)
                                                                                                                                  gcTTATGGGATAATTCCGCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATAGCGCCTGCTGCTGTTGCGTCTCGACAAACTCCGCGAc        <  2:981320/143‑1 (MQ=255)
                                                                                                                                   cTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTACTCCGCTAATGGCTGCGCGCAACCAACCAAATACCCTCGCAGATATTCCACCCCGAGCTTATCCAATCGCGCCCGCTGGTGTTGCGGCCCGACCAACCCCCCCAcc       >  2:574807/1‑143 (MQ=255)
                                                                                                                                        gggATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATAGCGCCTGCTGCTGTTGCGTCTCGACAAACTCCGCGACCACACt  <  1:1053012/143‑1 (MQ=255)
                                                                                                                                            |                                                                                                                                           
AGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATAGCGCCTGCTGCTGTTGCGTCTCGACAAACTCCGCGACCACACT  >  NC_000913/2515478‑2515756

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.