Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 3,815,859 Δ82 bp [rph][rph] [rph], [rph]

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 3815859 3815940 82 66 [0] [0] 66 [rph]–[rph] [rph],[rph]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 38158580 (0.000)63 (1.120) 49/264 0.1 100% pseudogene (24/48 nt) rph ribonuclease PH (defective);enzyme; Degradation of RNA; RNase PH
?NC_000913 3815941 = 0 (0.000)pseudogene (609/669 nt) rph ribonuclease PH (defective);enzyme; Degradation of RNA; RNase PH

ACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTC  >  NC_000913/3815717‑3816000
                                                                                                                                             |                                                                                                                                              
acacCTGCATGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCCTCTTACTTTTCTACAGACAAAAAAAAGGCGACTCACCAGTCGCCTTAAAAATCCGTTTGCCAGCGCCGCCTTCTGCc                                                                                                                                               >  2:1075427‑M1/1‑142 (MQ=255)
     tgcttgctAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtccc                                                                                                                                          <  2:642182‑M1/143‑7 (MQ=255)
            tcatcgcaaatTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACCAAAAAAAGGCGACTCATCAGTCGCCTCAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgcccgctgcact                                                                                                                                   >  2:1023439‑M1/5‑130 (MQ=255)
            tAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAACGCGCCTCATCAGTCGCCCTACAAACCCGCTTGCCAGCGCCGCCTTCTGCcgtcccctgcact                                                                                                                                   >  2:72852‑M1/1‑130 (MQ=255)
               gcgcAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCGTCGCTCCTCATCGTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacctca                                                                                                                                >  2:473879‑M1/1‑127 (MQ=255)
                cgcAACTCCAATACAGTGTCGCTGTTATCTTTTCCTGCCTTCGCTCCTCATCTTACTTTTCTACAGACCACAAACAGGCGCCTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaa                                                                                                                               <  2:162926‑M1/143‑18 (MQ=255)
                cgcAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACGCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaa                                                                                                                               <  1:457687‑M1/143‑18 (MQ=255)
                cacacattcaaCAAACTGGTGCTGATATGGTTTCATCGCCTCGCTCCTCATCTTACCTTTCTACAGACTAACAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTTCcgtcccctgcacttcaa                                                                                                                               <  2:163773‑M1/138‑18 (MQ=255)
                 gcAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcact                                                                                                                              >  1:165151‑M1/1‑125 (MQ=255)
                 gcAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaat                                                                                                                              >  1:636867‑M1/1‑125 (MQ=255)
                      tgcaaTAAACTGGCGCTGAGAGGGGGGCAGGCCGTCGCTCCTCATCGTACGTGGCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAGTCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgc                                                                                                                         <  1:234208‑M1/141‑24 (MQ=255)
                        cAATAACCTGGCGCTGATATCGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATTCGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgc                                                                                                                       <  1:689761‑M1/143‑26 (MQ=255)
                          aTAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTTAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgccc                                                                                                                     <  2:792173‑M1/143‑28 (MQ=255)
                           tAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttccctgatgcgcccg                                                                                                                    >  1:32612‑M1/1‑115 (MQ=255)
                                ttccgctgaTCTTGTTTCATCTCTTCTCTCCTCATCTTGCTTTTCTACAGACAAAAAAAAGGCTACTCACCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttc                                                                                                               <  2:985354‑M1/140‑34 (MQ=255)
                                 ggCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcg                                                                                                              <  1:824598‑M1/143‑35 (MQ=255)
                                  gcgcTGCTATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACACAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgctgcgcccgacttcgg                                                                                                             >  1:181634‑M1/1‑108 (MQ=255)
                                     cTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgctcgtcttccatca                                                                                                          >  1:398645‑M1/1‑105 (MQ=255)
                                       gATATGGTTTCATGCCTTCGCCCCTCATCTTACTTTTCGACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatc                                                                                                        <  2:1054853‑M1/143‑41 (MQ=255)
                                         tatGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCACCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCATCTGCctccccctgcactcccatgatgcgcccctcttctgtcacaac                                                                                                      >  2:612446‑M1/1‑101 (MQ=255)
                                            ggTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactac                                                                                                   >  1:421139‑M1/1‑98 (MQ=255)
                                                     ccTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtc                                                                                          >  1:298343‑M1/1‑89 (MQ=255)
                                                     ccTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtc                                                                                          >  1:479626‑M1/1‑89 (MQ=255)
                                                      cTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatccgcccgtcttcggtcctcactgccttcatgtct                                                                                         >  2:694154‑M1/1‑88 (MQ=255)
                                                        tCGCTCCTCATCTTACTTTTCTACAGACACAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggt                                                                                       <  1:430879‑M1/143‑58 (MQ=255)
                                                          gCTCCTCATCTTACTTTTCTACAGACAAAGAAAAGGCGGCCCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtct                                                                                     <  2:32612‑M1/143‑60 (MQ=255)
                                                            tcctcATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctcc                                                                                   >  2:253167‑M1/1‑82 (MQ=255)
                                                                      aCTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagt                                                                         >  1:927261‑M1/1‑72 (MQ=255)
                                                                        ttttCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAACATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtct                                                                       <  2:1088201‑M1/143‑74 (MQ=255)
                                                                        ttttCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTAGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgtacaagtcggtctctgcggccgagtct                                                                       >  2:710209‑M1/1‑70 (MQ=255)
                                                                            catcagaCAAAACAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGGGCCGCCTTCTGCcgtcccctgcacttcgatgatgcgcccgtcttcggtcatcacgacgttcaggtcggtctctgcggcagagtcttcaa                                                                   <  2:165151‑M1/140‑78 (MQ=255)
                                                                               gagACAAAAAAACGGCGACTCATCAGTCGCCTTAACAGTCCGGTTGCCAGCGCCGCCTTCTGTcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgt                                                                <  2:469641‑M1/142‑81 (MQ=255)
                                                                                aGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatacgcccgtcttcggtcatcactacgttcatgtcggtctctgcttcagagtcttcaacgta                                                               >  1:353286‑M1/1‑62 (MQ=255)
                                                                                 gACAAACAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctacacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtat                                                              <  1:1047959‑M1/143‑83 (MQ=255)
                                                                                 gACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccttcttcgctcatcactacgttcatgtcagtcaatacagcaaaatattcaacgtat                                                              >  1:78024‑M1/1‑61 (MQ=255)
                                                                                  aCAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATAAGATTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccggcttcggtcataccgaggttcatgtccgtctcgccggccgggtcttcaaggtatt                                                             >  2:185006‑M1/1‑60 (MQ=255)
                                                                                    aaaaaaaaGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcactgatgcgcccgtcttcggtcctcaatgcggcgctgtcggtctcttcggccgcgtcctccacgtatttc                                                           >  1:200651‑M1/1‑58 (MQ=255)
                                                                                    aaaaaaaaGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcctcactcggatcaacacggtctctgcggcagagtcttcaacgtcttcc                                                           >  2:771356‑M1/1‑58 (MQ=255)
                                                                                    aaaaaaaaGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattcc                                                           >  1:85110‑M1/1‑58 (MQ=255)
                                                                                    aaaaaaaaGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagaggcttgcacgtattcc                                                           >  1:202368‑M1/1‑58 (MQ=255)
                                                                                     aaaaaaaGGCGACTCATCAGTCGCCTTAAAAATCCGTTCGCCAGCGCCGGCGTCGGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattcca                                                          <  1:406418‑M1/143‑87 (MQ=255)
                                                                                       tttaaggcGACTGATGAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttccatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccaga                                                        >  2:951871‑M1/4‑55 (MQ=255)
                                                                                       aaaaaGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccaga                                                        <  2:198743‑M1/143‑89 (MQ=255)
                                                                                        aaaaGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagat                                                       <  1:931452‑M1/143‑90 (MQ=255)
                                                                                          aaGGCGACTGATGAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggt                                                                                       >  1:558265‑M1/1‑52 (MQ=255)
                                                                                          aaGGCGACTGATGAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggt                                                                                       <  2:558265‑M1/109‑58 (MQ=255)
                                                                                                 ctcctcAGTCGCCTGAAAAATCAGTTTGCCAGCGCCGCCTTCGGCcgtcccctgcacttcagtgatgcgcccgtcttcggtcatcactccgttcatggcgggctctgcggcagagtcttcaacgtattccagatcgcaaaccg                                              <  2:916639‑M1/143‑99 (MQ=255)
                                                                                                  ccctcagtcGCCTTAAAAATCTGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgc                                             <  2:637202‑M1/140‑100 (MQ=255)
                                                                                                     tcaGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcgaggcttctgtcatcactacgttcatgtcggtctctgcggcagaggcttcaacgtattccagatcgcaaaccgcttc                                          >  2:529358‑M1/1‑41 (MQ=255)
                                                                                                      ccgtcGCCTTAAAAATCAGTTGGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcg                                         <  2:900679‑M1/141‑104 (MQ=255)
                                                                                                      caGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcg                                         <  1:963042‑M1/143‑104 (MQ=255)
                                                                                                        gTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttccacgtcttccagatcgcaaaccgcttcgcc                                       >  1:24159‑M1/1‑38 (MQ=255)
                                                                                                          cGCCTGCAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgccgt                                     <  2:460151‑M1/143‑108 (MQ=255)
                                                                                                           gCCTCAAAAATCAGTTCGCCACCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcaccacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgccgtt                                    <  2:91636‑M1/143‑109 (MQ=255)
                                                                                                            ccTTAAAAATCAGTTTGCCAGCGCCGCATTCTGTcgttggctgtacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgccgttc                                   <  1:741514‑M1/143‑110 (MQ=255)
                                                                                                             cTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgccgttca                                  <  2:421139‑M1/143‑111 (MQ=255)
                                                                                                                  aaaTCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtatgccagatcgcacaccgcttcgccgttcacaatt                             >  2:378396‑M1/1‑28 (MQ=255)
                                                                                                                       ggtTTGCCAGCGCCGCCTTCTGCcgtcccctgctttgcaattatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgccgttcacaattccgac                        <  2:479626‑M1/142‑121 (MQ=255)
                                                                                                                       aGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatgactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgccgttcacaattccgac                        <  1:551657‑M1/143‑121 (MQ=255)
                                                                                                                       aGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgccgttcacaattccgac                        <  2:298343‑M1/143‑121 (MQ=255)
                                                                                                                             ccgccgccgtcgtcTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcagcactacgttcatgtcggtctctgcggcagagtcttcaacttattccagatcgcaaaccgcttcgccgttcacaattccgacagaaac                  <  2:288716‑M1/139‑127 (MQ=255)
                                                                                                                                gcgcCGCCTTCTGTcgtcccctgcacttcaatgatgcgcctgtgttcggtcatcactacgttcatgtcggtcgctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgccgttcacaattccgacagaaactgc               <  2:438711‑M1/143‑130 (MQ=255)
                                                                                                                                gcgcCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaacccgcttcgccgttcacaattccgacagaaactgc               >  1:12855‑M1/1‑14 (MQ=255)
                                                                                                                                         tCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgccgttcacaattccgacagaaactgcggctaccat      >  1:667770‑M1/1‑5 (MQ=255)
                                                                                                                                            gCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgccgttcacaattccgacagaaactgcggctaccatccc   <  2:636867‑M1/143‑142 (MQ=255)
                                                                                                                                             ccgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggccgagtcttcaacgtattccagatcgcaaaacgattcgccgttcacaattccgacagcaaatgcggctacgctctct  >  2:788679‑M1/1‑1 (MQ=255)
                                                                                                                                             |                                                                                                                                              
ACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTC  >  NC_000913/3815717‑3816000

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.