New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4178481	59 (0.970)	5 (0.090)	5/270	7.7	8.4%	coding (35/429 nt)	rplK	50S ribosomal subunit protein L11
	?	NC_000913	= 4178484	53 (0.920)					coding (38/429 nt)	rplK	50S ribosomal subunit protein L11
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACAAGCCTATGTCAAGCTGCAGGTTGCAGCTGGTATGGCTAACCCGAGTCCGCCAGTAGGTCCGGCTCTGGGTCAGCAGGGCGTAAACATCATGGAATTCTGCAAAGCGTTCAACGCAAAAACTGATTCCATCGAAAAAGGTCTGCCGATTCCGGTAGTAATCAC  >  NC_000913/4178343‑4178625                                                                                                                                              |                                                                                                                                              tACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTCCCCAACTTGAGGAATTTATAATGGCTAAGAAGGGCCCAGCCTGTGTCACGCTGCAGGtt                                                                                                                                              >  1:266367/1‑143 (MQ=255)  aCAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACAAGCCTATGTCAAGCTGCAGGTTg                                                                                                                                             <  1:1078373/143‑1 (MQ=255)      tttCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAACCGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACAAGCCTATGTCAAGCTGCAGGTTGCAGc                                                                                                                                         <  1:489961/143‑1 (MQ=255)        gcgcgCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTGAGAGCAGGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACAAGCCTATGTCAAGCTGCAGGTTGCAGCTg                                                                                                                                       <  2:431537/142‑1 (MQ=255)         cgcgCCTTTTGTTTTCATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACAAGCCTATGTCAAGCTGCAGGTTGCAGCTgg                                                                                                                                      <  1:971548/143‑1 (MQ=255)          gcgcCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACAAGCCTATGTCAAGCTGCTGGTTGCGGCTGGt                                                                                                                                     >  1:131141/1‑143 (MQ=255)          gcgcCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACAAGCCTATGTCAAGCTGCAGGTTGCAGCTGGt                                                                                                                                     >  1:758569/1‑143 (MQ=255)             ccTTTTGTTTTTATGTGCCTTGCCCGTAATACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACAAGCCTATGTCAAGCTGCAGGTTGCAGCTGGTATg                                                                                                                                  <  1:677330/143‑1 (MQ=255)                  tGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACAAGCGTATGTCAAGCTGCAGGTTGCAGCTGGTATGGCTag                                                                                                                             >  1:363708/1‑142 (MQ=255)                       ttATGGTCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACAAGCCTATGTCAAGCTGCAGGTTGCAGCTGGTATGGCTAACCCGa                                                                                                                        <  2:385157/143‑1 (MQ=255)                       ttATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACAAGCCTATGTCAAGCTGCAGGTTGCAGCTGGTATGGCTAACCCGa                                                                                                                        <  1:437915/143‑1 (MQ=255)                       ttATGGGCCTTGCCCGTAAAACGATTTTTAATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACAAGCCTATGTCAAGCTGCAGGTTGCAGCTGGTATGGCTAATCCGa                                                                                                                        <  2:190065/143‑1 (MQ=255)                           gggCCGTGCCCGCAAAACGATTTTGTATATCACGGGGAGCCGTTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACAAGCCTATGTCAAGCTGCAGGTTGCAGCTGGTATGGCTAACCCGAGTcc                                                                                                                    <  1:487006/143‑1 (MQ=255)                              ccTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGCGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACAAGCCTATGTCCACCTGCGGGTTGCAGCTGGTATGGCTCACCAGAGgccgcc                                                                                                                 >  2:322050/1‑143 (MQ=255)                                 tGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACAAGCCTATGTCAAGCTGCAGGTTGCAGCTGGTATGGCTAACCCGAGTCCGCCAGt                                                                                                              <  1:859298/143‑1 (MQ=255)                                   ccggTAAAACGAGTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACAAGCCTATGTCAAGCTGCAGGTTGCAGCTGGTATGGCTAACCCGAGTCCGCCAGTAg                                                                                                            <  2:52991/140‑1 (MQ=255)                                      gTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACAAGCCTATGTCAAGCTGCAGGTTGCAGCTGGTATGGCTAACCCGAGTCCGCCAGTAGGTc                                                                                                         >  1:767750/1‑143 (MQ=255)                                         aaaCGATTTTTGATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACCTGAGGAATTTATAATGGCTAAGAAAGTACAAGCCTATGTCAAGCTGCAGGTTGCAGCTGGTATGGCTAACCCGAGTCCGCCAGTAGGTCCgg                                                                                                      <  1:317281/143‑1 (MQ=255)                                         aaaCGATCTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACAAGCCTATGTCAAGCTGCAGGTTGCAGCTGGTATGGCTAACCCGAGTCCGCCAGTAGGTCCgg                                                                                                      <  1:344062/143‑1 (MQ=255)                                          aaCGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACACGCCTATGTCAAGCTGCAGGTTGCAGCTGGTATGGCTAACCCGAGTCCGCCAGTAGGTCCGGc                                                                                                     >  1:554544/1‑143 (MQ=255)                                            cgagtctttATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACAAGCCTATGTCAAGCTGCAGGTTGCAGCTGGTATGGCTAACCCGAGTCCGCCAGTAGGTCCGGctc                                                                                                   <  1:1019055/137‑1 (MQ=255)                                               ttttttATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAACGTACAAGCCTATGTCAAGCTGCAGGTTGCAGCTGGTATGGCTAACCCGAGTCCGCCAGTAGGTCCGGCTCTgg                                                                                                <  1:749717/143‑1 (MQ=255)                                                 ttttATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACAAGCCTATGTCAAGCTGCAGGTTGCAGCTGGTATGGCTAACCCGAGTCCGCCAGTAGGTCCGGCTCTGGGt                                                                                              >  1:529138/1‑143 (MQ=255)                                                          aCGGTGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACAAGCCTATGTCAAGCTGCAGGTTGCAGCTGGTATGGCTAACCCGAGTCCGCCAGTAGGTCCGGCTCTGGGTCAGCAGGGc                                                                                     <  2:253783/143‑1 (MQ=255)                                                          aCGGGGCGCCTCGGGTAGGCGTTGTTCCGCAACTTGAGGCATTTATACTGGCTAAGAAAGTACAAGCCTATGTCCCGCTGCTGGTGGCAGCTGGTATGGCTAACCCGAGTCCGCCAGTAGGTCCGGCTCTGGGTCAGCAGGGc                                                                                     <  2:259340/143‑1 (MQ=255)                                                          aCGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAAGGGCTGAGAAAGTACAAGCCTATGTCAAGCTACAGGTTGCAGAGCGTATAGCTAGCCCGAGTACGCCAGTAGGTCCGGCTCTGGGTCACCAGGGc                                                                                     >  2:1008513/1‑143 (MQ=255)                                                           cGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACAAGCCTATGTCAAGCTGCAGGTTGCAGCTGGTATGGCTACCCCGAGTCCGCCAGTAGGTCCGGCTCTGGGTCAGCCCGGCg                                                                                    >  2:421511/1‑143 (MQ=255)                                                              ggAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACAAGCCTATGTCAAGCTGCAGGTTGCAGCTGGTATGGCTAACCCGAGTCCGCCAGTAGGTCCGGCTCTGGGTCAGCCGGGCGtcg                                                                                 >  2:739979/1‑141 (MQ=255)                                                                  cttctgAGAGGCGTTCTTCCCCAACTTGAGGAATTTATAAGGGCTAAGAAAGTACAAGCCTATGTCAAGCTGCAGGTTGCAGCTGGTATGGCTAACCCGAGTCCGCCAGTAGGTCCGGCTCTGGGTCAGCAGGGCGTAAAcat                                                                             <  2:759157/141‑1 (MQ=255)                                                                  ccTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACAAGCCTATGTCAAGCTGCAGGTTGCAGCTGGTATGGCTAACCCGAGTCCGCCAGTAGGTCCGGCTCTGGGTCAGCAGGGCGTAAAcat                                                                             >  2:1004606/1‑143 (MQ=255)                                                                   ctctCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACAAGCCTATGTCAAGCTGCAGGTTGCAGCTGGTATGGCTAACCCGAGTCCGCCAGTAGGTCCGGCTCTGGGTCAGCAGGGCGTAAAcatc                                                                            <  2:246966/143‑1 (MQ=255)                                                                    tctcAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACAAGCCTATGTCAGGCTGGTGGGTCCAGGTGGTGTGGTTGACCTGAGGCCGCCAGTAGGTCCGGCCTCGGGTCAGCAGGGCGTACAcatca                                                                           >  2:1067481/1‑143 (MQ=255)                                                                    tctcAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACAAGCCTATGTCAAGCTGCAGGTTGCAGCTGGTATGGCTAACCCGAGTCCGCCAGTAGGTCCGGCTCTGGGTCAGCAGGGCGTAAAcatca                                                                           >  1:836545/1‑143 (MQ=255)                                                                    tctcAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACAAGCCTATGTCAAGCTGCAGGTTGCAGCTGGTATGGCTAACCCGAGTCCGCCAGTAGGTCCGGCTCTGGGTCAGCAGGGCGTAAAcatca                                                                           >  1:945465/1‑143 (MQ=255)                                                                     ctcAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACAAGCCTATGTCAAGCTGCAGGTTGCAGCTGGTATGGCTAACCCGAGTCCGCCAGTAGGTCCGGCTCTGGGTCAGCAGGGCGTAAAcatcat                                                                          <  1:729255/143‑1 (MQ=255)                                                                     ctcAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACAAGCCTATGTCAAGCTGCAGGTTGCAGCTGGTATGGCTAACCCGAGTCCGCCAGTAGGTCCGGCTCTGGGTCAGCAGGGCGTAAAcatcat                                                                          <  1:368001/143‑1 (MQ=255)                                                                      gcAGAGGGGTTATTACCCAACTTGAGGGATTTATAAGGGCTAAGAAAGTACAAGCCTATGTCAAGCTGCAGGTTGCAGCTGGTATGGCTAACCCGGGTCCGCCAGTAGGTCCGGCTCTGGGTCAGCAGGGCGTAAACATCATg                                                                         <  2:430060/142‑1 (MQ=255)                                                                      acAGAGGCGTTATCACCCAACTTGAGGAATCTATAAGGGCTAAGAAAGTACAAGCCTATGTCAAGCTGCAGGTTGCAGCTGGTATGGCTAACCCGAGTCCGCCAGTAGGTCCGGCTCTGGGTCAGCAGGGCGTAAACATCATg                                                                         <  1:97542/142‑1 (MQ=255)                                                                                           ttGAGGTATTTATAATGGCTAAGAAAGTACAAGCCTATGTCAAGCTGCAGGTTGCAGCTGGTATGGCTAACCCGAGTCCGCCAGTAGGTCCGGCTCTGGGTCAGCAGGGCGTAAACATCATGGAATTCTGCAAAGCGTTCAAc                                                    <  2:78777/143‑1 (MQ=255)                                                                                             gAGGAATTTATAATGGCTAAGAAAGTACAAGCCTATGTCAAGCTGCGGGTTGCAGCTGGTATGGCTAACCCGAGTCCGCCAGTAGGTCCGGCTCTGGGTCAGCAGGGCGTAGACATCATGGAATTCTGCAAAGCGTTCAACGc                                                  >  1:1079708/1‑143 (MQ=255)                                                                                             gAGGAATTTATAATGGCTAAGAAAGTACAAGCCTATGTCAAGCTGCGGGTTGCAGCTGGTATGGCTAACCCGAGTCCGCCAGTAGGTCCGGCTCTGGGTCAGCAGGGCGTAAACATCATGGAATTCTGCAAAGCGTTCAACGc                                                  >  1:844681/1‑143 (MQ=255)                                                                                             gAGGAATTTATAATGGCTAAGAAAGTACAAGCCTATGTCAAGCTGCAGGTTGCAGCTGGTATGGCTAACCCGAGTCCGCCAGTAGGTCCGGCTCTGGGTCAGCAGGGCGTAAACATCATGGAATTCTGCAAAGCGTTCAACGc                                                  >  1:51311/1‑143 (MQ=255)                                                                                                gAATTTATAATGGCTAAGAAAGTACAAGCCTATGTCAAGCTGCAGGTTGCAGCTGGTATGGCTAACCCGAGTCCGCCAGTAGGTCCGGCTCTGGGTCAGCAGGGCGTAAACATCATGGAATTCTGCAAAGCGTTCAACGCaaa                                               >  2:352019/1‑143 (MQ=255)                                                                                                gAATTTATAATGGCTAAGAAAGTACAAGCCTATGTCAAGCTGCAGGTTGCAGCTGGTATGGCTAACCCGAGTCCGCCAGTAGGTCCGGCTCTGGGTCAGCAGGGCGCACACCTCATGGAATTCTGCGCAGCGTTCAACGCgaa                                               >  1:488243/1‑143 (MQ=255)                                                                                                   tttATAATGGCTAAGAAAGTACAAGCCTATGTCAAGCTGCAGGTTGCAGCTGGTATGGCTAACCCGAGTCCGCCAGTAGGTCCGGCTCTGGGTCAGCAGGGCGTAAACATCATGGAATTCTGCAAAGCGTTCAACGCAAAAAc                                            <  1:577244/143‑1 (MQ=255)                                                                                                      ataATGGCTAAGAAAGTACAAGCCTATGTCAAGCTGCATGTTGCAGCTGGTATGGCTAACCCAAGTCCGCCAGTAGGTCCGGCTCTGGGTCAGCAGGGCGTAAACATCATGGAATTCTGCAAAGCGTTCAACGCAAAAACTGa                                         >  2:383177/1‑143 (MQ=255)                                                                                                            gCTAAGAAAGTACAAGCCGATGTCAAGCTGCAGGTTGCAGCTGGTATGGGCCCGTCAAAACCTCCAGTAGGTCCGGCTCTGGGTCAGCAGGGCGTAAACATCATGGAATTCTGCAAAGCGTTCAACGCAAAAACTGATTCCAt                                   <  1:504170/143‑1 (MQ=255)                                                                                                               aaGAAAGTACAAGCCTATGTCAAGCTGCAGGTTGCAGCTGGTATGGCTAACCCGAGTCCGCCAGTAGGTCCGGCTCTGGGTCAGCAGGGCGTAAACATCATGGAATTCTGCAAAGCGTTCAACGCAAAAACTGATTCCATCGa                                >  1:483556/1‑143 (MQ=255)                                                                                                                  aaaGTACAAGCCTATGTCAAGCTGCAGGTTGCAGCTGGTATGGCTAACCCGAGTCCGCCAGTAGGTCCGGCTCTGGGTCAGCAGGGCGTAAACATCATGGAATTCTGCAAAGCGTTCAACGCAAAAACTGATTCCATCGaaaa                             >  1:755143/1‑143 (MQ=255)                                                                                                                  aaaGTACAAGCCTATGTCAAGCTGCAGGTTGCAGCTGGTATGGCTAACCCGAGTCCGCCAGTAGGTCCGGCTCTGGGTCAGCAGGGCGTAAACATCATGGAATTCTGCAAAGCGTTCAACGCAAAAACTGATTCCATCGaaaa                             >  1:815801/1‑143 (MQ=255)                                                                                                                        ccggCCTATGTAAAGCTGCAGTGTGCAGCTGGTATGGCTAACCCGAGTCCGCCATTAGGTCCGGCTCTGGGTCAGCAGGCCGTAAACATCATGGAATTCTGCAAAGCGTTCAACGCAAAAACTGATTCCATCGAAAAAGGTCt                       <  2:349319/140‑1 (MQ=255)                                                                                                                         aaGCCTATGTCAAGCTGCAGGTTGCAGCTGGTATGGCTAACCCGAGTCCGCCAGTAGGTCCGGCTCTGGGTCAGCAGGGCGTAAACATCATGGAATTCTGCAAAGCGTTCAACGCAAAAACTGATTCCATCGACAAAGGTCTg                      >  2:1019053/1‑143 (MQ=255)                                                                                                                           gtcTATGTCAAGCTGCAGGATGCAGCGGGTATGGCTAACCCGAGTCCGCCAGTAGGTCCGGCTCTGGGTCAGCAGGGCGTAAACATCATGGAATTCTGCAAAGCGTTCAACGCAAAAACTGATTCCATCGAAAAAGGTCTGcc                    <  1:972628/141‑1 (MQ=255)                                                                                                                                      gCTGCAGGTTGCAGCTGGTATGGCTAACCCGAGTCCGCCAGTAGGTCCGGCTCTGGGTCAGCAGGGCGTAAACATCATGGAATTCTGCAAAGCGTTCAACGCAAAAACTGATTCCATCGAAAAAGGTCTGCCGATTCCGgtag         >  2:238261/1‑143 (MQ=255)                                                                                                                                        tGCAGGTTGCAGCTGGTATGGCTAACCCGAGTCCGCCAGTAGGTCCGGCTCTGGGTCAGCAGGGCGTAGACATCATGGAGTTCTGCAAAGCGTTCAACGCAAAAACTGATTCCATCCAAAAAGGTCTGCCGCTTCCGcaagta       >  2:100186/1‑143 (MQ=255)                                                                                                                                             gTTGCAGCTGGTACGCCCAACCCGCGTCCGCCAGTAGGTCCGCCTCTGGGTCAGCAGGGCGTAAACATCATGGAATTCTGCAAAGCGTTCAACGCAAAAACTGATTCCATCGAAAAAGGTCTGCCGATTCCGGTAGTAATCAc  <  1:197226/143‑1 (MQ=255)                                                                                                                                              |                                                                                                                                              TACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACAAGCCTATGTCAAGCTGCAGGTTGCAGCTGGTATGGCTAACCCGAGTCCGCCAGTAGGTCCGGCTCTGGGTCAGCAGGGCGTAAACATCATGGAATTCTGCAAAGCGTTCAACGCAAAAACTGATTCCATCGAAAAAGGTCTGCCGATTCCGGTAGTAATCAC  >  NC_000913/4178343‑4178625

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.