New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 193444 =32 (0.830)3 (0.080) 3/264 5.4 9.1% intergenic (+15/‑77) frr/dxr ribosome recycling factor/1‑deoxy‑D‑xylulose 5‑phosphate reductoisomerase
?NC_000913 193489 = 30 (0.840)intergenic (+60/‑32) frr/dxr ribosome recycling factor/1‑deoxy‑D‑xylulose 5‑phosphate reductoisomerase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GGGATTATGGCGCACCACGTCCAGCGTGCTGCAACCAATCGAGCCGGTCGAGCCCAGAATGGTGAGTTGCTTCATGAAACATCCAGAGTTGAGACAGAATAAAAAGCAAAACGCCGCCAGCCGATCCGCAAGGATCTACTGAGCGGCGTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/193595‑193444
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggcgttttGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACTCACCATTCTGGGCTCGACCGGCTCGATTGGTTGCAGCACGCTGGACGTGGTGCGCCATAATCCCGAACACTTCCGCGTAGTTGCGCTGGTGGCA  >  NC_000913/193489‑193625
                                                                                                                                                                                                                                                                                                  
GGGATTATGGCGCACCACGTCCAGCGTGCTGCAACCAATCGAGCCGGTCGAGCCCAGAATGGTGAGTTGCTTCATGAAACATCCAGAGTTGAGACAGAATAAAAAGCAAAACGCCGCCAGCCGATCCGCAAGGCTCTACTGAG                                                                                                                                                     >  1:83664/1‑143
GGGATTATGGCGCACCACGTCCAGCGTGCTGCAACCAATCGAGCCGGTCGAGCCCAGAATGGTGAGTTGCTTCATGAAACATCAAGAGTTGAGACAGAATAAAAAGCAAAACGCCGCCAGCCGATCCGCAAGGATCTACTGAG                                                                                                                                                     >  1:306247/1‑143
     TATGGCGCACCACGTCCAGCGTGCTGCAACCAATCGAGCCGGTCGAGCCCAGAATGGTGAGTTGCTTCATGAAACATCCAGAGTTGAGACAGAATAAAAAGCAAAACGCCGCCAGCCGATCCGCAAGGATCTACTGAGCGGCG                                                                                                                                                >  1:325464/1‑143
        cGCGCCCCACGACCAGCGTCCTGCAACCACACCAGCCGGTCTAGCCCAGAATGGTGAGTCGCTTCATGAAACACCCAGAGTTGAGACAGAATACAAAGCAAAACGCCGCCAGCCGATCCGCAAGGATCTACTGAGCGGCGTTT                                                                                                                                             <  1:422667/142‑1
                                                                                                             AACGCCGCCAGCCGATCCGCAAGGATCTACTGAGCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACTCACCATTCTGGGCTCGACCAGCTTAGTAGTTGTCAGCACGCTGGCCGTGGTGCGCCA                                       >  1:125942/1‑143
                                                                                                                 CCGCCAGCCGATCCGCAAGGATCTACTGAGCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACTCACCATTCTGGGCTCGACCGGCTCGATTGGTTGGAGCACGGTGGACGGGGGGCGCCGTAgt                                   >  2:75972/1‑141
                                                                                                                               GCAAGGATCTACTGAGCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACTCACCATTCTGGGCTCGACCGGCTCGATTGGTTGCATCACGCAGGACGTGAGCCGGCACAATCACGAAAACATCCG                     >  2:336251/1‑143
                                                                                                                                                  CGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACTCACCATTCTGGGCTCGACCGGCTCGATTGGTTGCAGCACGCTGGACGTGGTGCGCCATAATCCCGAACACTTCCGCGTAGTTGCGCTGGTGGCA  >  1:445045/1‑143
                                                                                                                                                                                                                                                                                                  
GGGATTATGGCGCACCACGTCCAGCGTGCTGCAACCAATCGAGCCGGTCGAGCCCAGAATGGTGAGTTGCTTCATGAAACATCCAGAGTTGAGACAGAATAAAAAGCAAAACGCCGCCAGCCGATCCGCAAGGATCTACTGAGCGGCGTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/193595‑193444
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggcgttttGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACTCACCATTCTGGGCTCGACCGGCTCGATTGGTTGCAGCACGCTGGACGTGGTGCGCCATAATCCCGAACACTTCCGCGTAGTTGCGCTGGTGGCA  >  NC_000913/193489‑193625

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.