| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 1,491,904 | IS186 (+) +3 bp | intergenic (+54/+16) | ydcA → / ← hokB | putative periplasmic protein/toxic polypeptide, small |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 609351 | NA (NA) | 40 (0.860) | 35/274 | 0.3 | 100% | noncoding (1345/1345 nt) | IS186 | repeat region |
| ? | NC_000913 | 1491904 = | 0 (0.000) | intergenic (+54/+18) | ydcA/hokB | putative periplasmic protein/toxic polypeptide, small | |||||
| * | ? | NC_000913 | = 1491906 | 0 (0.000) | 56 (1.200) | 53/274 | 0.0 | 100% | intergenic (+56/+16) | ydcA/hokB | putative periplasmic protein/toxic polypeptide, small |
| ? | NC_000913 | 2514273 = | NA (NA) | noncoding (1/1345 nt) | IS186 | repeat region | |||||
ATCTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/609206‑609351‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggaAAATCCCCGCGCTTGCCCTTACCTGGACGTGCAGGCCATGAGCGCAGCAACCTCCTTATCACCGTCCCGGAAC‑CGCAGTTCGTAGAGCGTTTGTCGGGTCAGGAGTGTGAATGTCAGAATCGTAATGCAGATAATGAG > NC_000913/1491904‑1492041 ATCTGGAGTTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCATCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATG < 1:74707/143‑1 TCTGGTGCTTACAGGTGGCCATTCGTTGGACAGTATCCCTGACAGCCTGCAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGCTGGCTCAACCCAGAAGTTAGCGCTTATGG < 2:677072/143‑1 CTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTACGTTAGCGCCTACGGc > 2:270250/1‑142 CTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGG > 1:865240/1‑143 gGGAGCTTACGGGTGGCCATCCCTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGA < 2:87219/142‑1 TGGGGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGA < 1:711424/143‑1 TGGAGCTTACAGGTGGCCATTCGTGGGGCAGGATCCCTGACAGCCTACAAAGCGCAATTGAAGAACGCGATGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCAACCGCAAGTACGACCCTTAAGTTAGCGCTTAGGGGA < 2:771195/143‑1 TGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGA < 1:682163/143‑1 TGGAGCTTACAGGTGGCCATGCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGA < 1:127917/143‑1 CTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGACGCACGCGCGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTGCAGCTGGTTCAACCCTTAAGGTAGCGCTTATGGGAAAcgc > 2:690854/1‑140 ATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGCGGCGTCGCATTCTTCAGATGGTTCACCCCTTACGTTAGCGCTTATGGGACACTCCCCGCGCTTGCCC > 1:262530/1‑143 ATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTCAGTTAGCGCCTATGCGAAAATGCCCGCGCTTACCC > 2:508391/1‑143 TGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGCAAATCCCCGCGCTTGCCCTTACC > 2:800615/1‑143 GACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACACTAAAGTTAGCGCTTATGGGAAAATCCCCGCGCTTGCCCTTCCCTGG > 2:473274/1‑143 CAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAAAATCCCCGCGCTTGCCCTTACCTGGAC < 1:271135/143‑1 TCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAAAATCCCCGCGCTTGCCCTTACCTGGACGTGCA < 1:432440/143‑1 CCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAAAATCCCCGCGCTTGCCCTTACCTGGACGTGCAG < 2:157425/143‑1 CCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAAAATCCCCGCGCTTGCCCTTACCTGGACGTGCAGG > 1:18692/1‑143 TGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGCAAAATCCGCGACCTTGCCCTTACCTGTACGTGCAGGCC > 1:682767/1‑143 GACAGCCCGCCATACGCAGTTGAAGACCGCGAGGCACCGTCGTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAAAATCCCCGCGCTTGCCCTTACCTGGACGTGCAGGCCA < 2:508040/143‑1 AGCCGACAAAGCGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAAAATCCCCGCGCTTGCCCTTACCTGGACGTGCAGGCCATGA < 1:777620/143‑1 ACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTCAGCGCTTATGGGAAAATCCCCGCGCTTGCCCTTACCTGGACGTGCAGGCCATGAGCGCA < 2:720307/143‑1 ACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAAAATCCCCGCGCTTGCCCTTACCTGGACGTGCAGGCCATGAGCGCAGCAAC < 1:694831/143‑1 ACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAAAATCCCCGCGCTTGCCCTTACCTGGACGTGCAGGCCATGAGCGCAGCAAC < 1:108727/143‑1 GCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAAAATCCCCGCGCTTGCCCTTACCTGGACGTGCAGGCCATCAGCGCAGCAACCT > 1:284066/1‑143 GCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTGCAACCCTTAAGTTAGCGCTTATGGGAAGATCCCCGCGCTTGCCCGTACCTGCACGTGCCGGCCATGAGCGCAGCAACCT > 1:715727/1‑143 AATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAAAATCCCCGCGCTTGCCCTTACCTGGACGTGCAGGCCATGAGCGCAGCAACCTCC > 1:435927/1‑143 AATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAAAATCCCCGCGCTTGCCCTTACCTGGACGTGCAGGCCATGAGCGCAGCAACCTCC > 1:449645/1‑143 ATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAAAATCCCCGCGCTTGCCCTTACCTGGACGTGCAGGCCATGAGCGCAGCAACCTCCT > 1:742796/1‑143 cgtcGCATCGTCTTAGAGAGGCACCGGGGCCTCGCATTCGTCATATGCTTCAACCCTTAAGTTAGCGCTTAGGTGATTTTCCCCGCGCTTGCCCTTACCTGGACGTGCAGGCCATGAGCGCAGCAACCTCCTTATCACCGTCC < 2:530534/139‑1 gGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCACCCCTTAAGTTAGCGCTTATGGGAAACTCCCCGCGCTTGCCCTTACCTGGACGTGCAGGCCATGAGCGCAGCAACCTCCTTATCACCGTCCCG < 2:179107/142‑1 atGCATCGTCGTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATATTCCCCTCGCTTGCCCTTACCTGGACGTGCAGGCCATGAGCGCAGCAACCTCCTTATCACCGTCCCG < 1:421904/141‑1 AGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAAAATCCCCGCGCTTGCCCTTACCTGGACGTGCAGGCCATGAGCGCAGCAACCTCCTTATCACCGTCCCG > 1:368016/1‑143 GGCATCGTCTTAACGAGGCACCGAGGCGTCGAATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAAAATCCCCGCGCTTGCCCTTACCAGGACGTGCAGGCCATGAGCGAAGCAACCTCATTATAACCGTCCCGa > 2:331600/1‑142 TCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAAAATCCCCGCGCTTGCCCTGCCGTGGACACGCAGGCAATGAGCGCAGCAACCTCCTTATCACCGTCCCGGcccc > 2:347559/1‑139 GAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAAAATCCCCGCGCTTGCCCTTACCTGGACGTGCAGGCCATGCGCGCAGCGACCGCCTTATGACCGTGCCGGGAC‑CGCAGTGCGag > 1:298237/1‑141 caaGCGTCGCATTCTTCAGATGGTTCAACCCATAAGTTAGCGCGGATGGGAAAATCCCCGCGCTTGCCCTTACCTGGACGTGCAGGCCATGAGCGCAGCAACCTCCTTATCACCGTCCCGGAAC‑CGCAGTTCGTAGAGCGTTT < 1:112932/140‑1 TCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAAAAAAAACGAGATTGCATTTGCCTGGAAGTGAAGGCCATGAGCGCAGCAACCTCCTTATCACCGTCCCGGAAC‑CGCAGTTCGTAGAGCGTTTGTCGGG > 1:369359/1‑143 TTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAAAATCCCCGCGCTTGCCCTTACCTGGACGTGCAAGCCAGGAGCGACGCAACCTCCTTATCACCGTCCCGGAAC‑CGCAGTTCGTAGCGCGTACGACGGGTCGGG > 2:528440/1‑143 TTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAAAATCCCCGCGCTTGCCCTTACCTGGACGAGCAGGCCATGAGCGCAGCAACCTCCTTATCACCGTCCCGGAAC‑AGCAGTTAGTAGAGCGTGCGTCGGGCCAGGAGa > 2:682277/1‑142 AGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAAAATCCCCGCGCTTGCCCTTACCTGGACGTGCAGGCCATGAGCGCAGCAACCTCCTTATCACCGTCCCGGAAC‑CGCAGTTCGTAGAGCGTTTGTCGGGTCAGGAGTGTG > 1:176422/1‑143 GATGGTTCAACCCTTAAGTTAGCGCTGATGGGAAAAGCCCCGCGCTTGCCCTTACCTGGACGTGCAGGCCATGAGCGCAGCAACCTCCTTATCACCGTCCCGGAAC‑CGCAGTTCGTAGAGCGTTTGTCGGGCCAGGATTGTGA < 2:191232/143‑1 ATGGTTCAACCCTTAAGTTAGCGCTTATGGGAAAATCCCCGCGCTTGCCCTTACCTGGACGTGCAGGCCATGAGCGCAGCAACCTCCTTATCACCGTCCCGGAAC‑CGCAGTTCGTAGAGCGTTTCTCGGGTCAGGAGTGTGAA > 1:751534/1‑143 GTTCAACCCTTAAGTTAGCGCTTATGGGAAAATCCCCGCGCTTGCCCTTACCTGGACGTGCAGGCCCTGAGCGCAGCAACCTCCTCATCACCGTTCCGGCACTTGTAG‑TCGTAGAGCGTTTGTCGGGTCAGGCGTGTGAATGT > 1:73927/1‑143 AAGTTAGCGCTTATGGGAAAATCCCCGCGCTTGCCCTTACCTGGACGTGCAGGCCATGAGCGCAGCAACCTCCTTATCACCGTCCCGGAAC‑CGCAGTTCGTAGAGCGTTTGTCGGGTCAGGAGTGTGAATGTCAGAATCGTAA < 1:464193/143‑1 TTAGCGCTTATGGGAAAATCCCCGCGCTTGCCCTTACCTGGACGTGCAGGCCATGAGCGCAGCAACCTCCTTATCACCGTCCCGGAAC‑CGCAGTTCGTCGAGCGTTTGTCGGGTCAGGCGTGCGAATGTCAGAATCGTACTGC > 1:697503/1‑143 TTAGCGCTTATGGGAAAATCCCCGCGCTCGCCCTTACCTGGACGTGCAGGCCATGAGCGCAGCAACCTCCTTATCACCGTCCCGGAAC‑CGCAGTTCGTAGAGCGTTTGTCGGGTCAGGAGTGTGAATGTCAGAATCGTAATGC < 1:19926/143‑1 ATGGGAAAAGCCCCGCGCTTGCCCTTACCTGGACGTGCAGGCCATGAGCGCAGCAACCTCCTTATCACCGTCCCGGAAC‑CGCAGTTCGTAGAGCGTTTGTCGGGTCAGGAGTGTGAATGTCAGAATCGTAATGCAGATAATGA < 1:542579/143‑1 TGGGAAAATCCCCGCGCTTGCCCTTACCTGGACGTGCAGGCCATGAGCGCAGCAACCTCCTTATCACCGTCCCGGAAC‑CGCAGTTCGTAGAGCGTTTGTCGGGTCAGGAGTGTGAATGTCAGAATCGTAATGCAGATAATGAG < 1:347559/143‑1 ATCTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/609206‑609351‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggaAAATCCCCGCGCTTGCCCTTACCTGGACGTGCAGGCCATGAGCGCAGCAACCTCCTTATCACCGTCCCGGAAC‑CGCAGTTCGTAGAGCGTTTGTCGGGTCAGGAGTGTGAATGTCAGAATCGTAATGCAGATAATGAG > NC_000913/1491904‑1492041 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |