Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 153,986 IS5 (–) +4 bp coding (1438‑1441/2598 nt) htrE ← putative outer membrane usher protein

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 153986 =0 (0.000)89 (1.860) 50/282 0.0 100% coding (1441/2598 nt) htrE putative outer membrane usher protein
?NC_000913 = 275149 NA (NA)noncoding (1/1195 nt) IS5 repeat region
* ? NC_000913 = 1539890 (0.000)35 (0.730) 26/282 1.0 100% coding (1438/2598 nt) htrE putative outer membrane usher protein
?NC_000913 273955 = NA (NA)noncoding (1195/1195 nt) IS5 repeat region

CCCCATGTTAATGACGGCTTTATCTTTCTGGGGCACAGGCTCATTCGCAAACGCAGTCGTTATGGCGAGATGCGAGTGGTCTCAACGATCCCGCAGGAGAAAGCCAGAAACTTCGCCGCATCGCTGACAGCACTGTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCC  >  NC_000913/273816‑274094
                                                                                                                                           |                                                                                                                                           
ccccAGGTTAAGGACGGCTTTATCTGTCGGGGGCACAGGCTCATTCGCAAACGCAGTCGTTATGGCGAGATGCGAGTGGTCTCAACGATCCCGCAGGAGAAAGCCAGAAACTTCGCCGCATCGCTGACAGCACTGTTATGGaa                                                                                                                                          <  1:300730/143‑1 (MQ=255)
               gacTTTATCGTTCTGGGGGACAGGCTCATTCGCAAACGCAGTCGTTATGGCGAGATGCGAGTGGTCTCAACGATCCCGCAGGAGAAAGCCAGAAACTTCGCCGCATCGCTGACAGCACTGTTATGGAAGGTGCGAATAAGCgg                                                                                                                           <  2:597939/141‑1 (MQ=255)
                  tttATCTTTCTGGGGCACAGGCTCATTCGCAAACGCAGTCGTTATGGCGAGATGCGAGTGGTCTCAACGATCCCGCAGGAGAAAGCCAGAAACTTCGCCGCATCGCTGACAGCACTGTTAGGGAAGGTGCGAATAAGCGGGGa                                                                                                                        >  2:552814/1‑143 (MQ=255)
                         ttCTGGGGCACAGGCTCATTCGCAAACGCAGTCGTTATGGCGAGATGCGAGTGGTCTCAACGATCCCGCAGGAGAAAGCCAGAAACTTCGCCGCATCGCTGACAGCACTGTTATGGAAGGTGCGAATAAGCGGGGAAAttctt                                                                                                                 <  2:682509/143‑1 (MQ=255)
                         ttCTGGGGCACAGGCTCATTCGCAAACGCAGTCGTTATGGCGAGATGCGAGTGGTCTCAACGATCCCGCAGGAGAAAGCCAGAAACTTCGCCGCATCGCTGACAGCACTGTTATGGAAGGTGCGAATAAGCGGGGAAAttctt                                                                                                                 >  2:198199/1‑143 (MQ=255)
                            tGGGGCACAGGCTCATTCGCAAACGCAGTCGTTATGGCGAGATGCGAGTGGTCTCAACGATCCCGCAGGAGAAAGCCAGAAACTTCGCCGCATCGCTGACAGCACTGTTATGGAAGGTGCGAATAAGCGGGGCAATTCTtctc                                                                                                              >  2:606352/1‑143 (MQ=255)
                                gCACAGGCTCATTCGCAAACGCAGTCGTTATGGCGAGATGCGAGTGGTCTCAACGATCCCGCAGGAGAAAGCCAGAAACTTCGCCGCATCGCTGACAGCACTGTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCt                                                                                                          >  1:131620/1‑143 (MQ=255)
                                    aGGCTCATTCGCAAACGCAGTCGTTATGGCGAGATGCGAGTGGTCTCAACGATCCCGCAGGAGAAAGCCAGAAACTTCGCCGCATCGCTGACAGCCCTGTTATGGAAGGTGCGGATAAGCGGGGAAATTCTTCTCGGCTGACt                                                                                                      >  1:563595/1‑143 (MQ=255)
                                     ggCTCATTCGCAAACGCAGTCGTTATGGCGAGATGCGAGTGGTCTCAACGATCCCGCAGGAGAAAGCCAGAAACTTCGCCGCATCGCTGACAGCGCTGTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTc                                                                                                     >  1:426311/1‑143 (MQ=255)
                                           ttCGCAAACGCAGTCGTTATGGCGAGATGCGAGTGGTCTCAACGATCCCGCAGGAGAAAGCCAGAAACTTCGCCGCATCGCTGACAGCACTGTTAGGGAAGGTGCGAGTAAGCGGGGAAGTTCTTCTCGGCTGACTCAGtcag                                                                                               >  1:787231/1‑142 (MQ=255)
                                           ggggCAACCGCAGTCGTGATGGCGACATGCGCGTGGTCGCAACGATGCCGCAGGAGAAAGCAAGAAACGTCGCCGCATAGCTGATAGCACTGTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGtcat                                                                                               <  1:133321/140‑1 (MQ=25)
                                             cGCAGACGCAGTCGTTATGGCGAGATGCGAGTGGTCTCAACGATCCCGCAGGAGAAAGCCAGAAACTTCGCCGCATCGCTGACAGCACTGTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGtcattt                                                                                             <  1:8470/143‑1 (MQ=255)
                                                     atgtttttATGGTGTGTTGCGAGGGGAATCAACGATCCCGGAGGAGAAAGCCAGAAACCTCGCCGCATCGCTGACAGCACTGTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATttctt                                                                                     <  1:699449/137‑1 (MQ=21)
                                                      ggTCGTTATGGGGAGATGGGAGTGGTCTCAACGATCCCGGAGGAGAAAGCCAGAAGGTTGGCAGCATCGCTGACAGCACTGTTATGGAAGGTGCGAATAAGCGGGGAAAGTCTTCTCGGCTGGCTCAGTAATTTCATttcttc                                                                                    <  2:775473/142‑1 (MQ=25)
                                                          gTTATGGCGCGATGCGAGTGGTCTCAACGATCCCGCAGGAGAAAGCCAGAAACTTCGCCGCATCGCTGACAGCACTGTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGt                                                                                <  2:268463/143‑1 (MQ=255)
                                                                 cGAGATGCGAGTGGTCTCAACGCTCCCGCAGGAGAGAGCTAGAAACTTCGCCGCAGCGCTGACAGCACTGTTCTGGAAGGTGCGAATAAGCGGGGACACACCTGTAGGCGCGCTCAGTCCCTTCATTTGTTCATGTTTGGGcc                                                                         >  2:386176/1‑143 (MQ=255)
                                                                      tGCGAGTGGTCTCAACGATCCCGCAGGAGAAAGCCAGAAACTTCGCCGCATCGCTGACAGCACTGTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGAttt                                                                    >  2:742227/1‑143 (MQ=255)
                                                                        cGAGTGGTCTCAACGATCCCGCAGGAGAAAGCCAGAAACTTCGCCGCATCGCTGACAGCACTGTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTCCATTTCTTCATGTTTGCGCCGAttttt                                                                  >  2:78229/1‑143 (MQ=255)
                                                                          aGTGGTCTCAACGATCCCGCAGGAGAAAGCCAGAAACTTCGCCGCATCGCTGACAGCACTGTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTtc                                                                <  1:198199/143‑1 (MQ=255)
                                                                              gcctcAACGTTCCCGCAGGAGCAAGCCAGCATCTTCGCCGCCTCGCTGACAGCACTGTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATTTTTGAGCCGATTTTTTCTccc                                                            <  2:560867/141‑1 (MQ=18)
                                                                               tctcAACGATCCCGCAGGAGAAAGCCAGAAACTTCGCCGCATCGCTGACAGCACTGTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCg                                                           >  2:321229/1‑143 (MQ=255)
                                                                                 tcAACGATCCCGCAGGAGAAAGCCAGAAACTTCGCCGCATCGCTGACAGCACTGTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTa                                                         >  1:128359/1‑143 (MQ=255)
                                                                                   agcGATCACGCACGAGAACGTCAGCAACTTCGCCGCATCGCTGATATCACTGGTATGGAAGTTGCGAATACGCGGGGAAATTCTTCTCGGCTTACTCAGTCATTTCATTTCTTCATGTTTGAGCCAATTTTGTCTCCCGTaaa                                                       <  2:271465/141‑1 (MQ=17)
                                                                                    aCGATCCCGCAGGAGAAAGCCAGAAACTTCGCCGCATCGCTGACAGCACTGTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATCTTTGAGCCGCTTTTTTCTCCCGTacac                                                      >  2:821466/1‑140 (MQ=255)
                                                                                           cGCAGGAGAAAGCCAGAAACTTCGCCGCATCGCTGACAGCACTGTTATGGAAGGTGCGAATGAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGa                                               >  1:790370/1‑143 (MQ=255)
                                                                                                 agaAAGCCGGAAACTTCGCCGCGTCGCTGACATCGCTGTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGc                                         <  2:316659/143‑1 (MQ=255)
                                                                                                 agaAAGCCAGAAACTTCGCCGCATCGCTGACAGCACTGTTATGGAAGGTGCGAACAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGc                                         >  2:277662/1‑143 (MQ=255)
                                                                                                         aGAAACTTCGCCGCATCGCTGACAGCACTGTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTTAGCCGCTTTTTTCTCCCGTAAATTCCTTGAATCAGCCTATTTAg                                 >  2:332913/1‑143 (MQ=255)
                                                                                                         aGAAACTTCGCCGCATCGCTGACAGCACTGTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTCGATCAGCCTATTCAg                                 >  2:501817/1‑143 (MQ=255)
                                                                                                                tCGCCGCTGCGCTGACCGTGCTGTTATGGACGGTGCGAATAAGCGGGGAAAGTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGttt                          <  2:692875/143‑1 (MQ=11)
                                                                                                                tCGCCGCATCGCTGACAGCACTGTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGttt                          >  2:798590/1‑143 (MQ=255)
                                                                                                                     gcATCGCTGACAGCACTGTGATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCg                     <  1:620627/143‑1 (MQ=255)
                                                                                                                         cGCTGACAGCACTGTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATGTTTTCTCCCGTCAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCAt                 >  2:748430/1‑143 (MQ=255)
                                                                                                                                      gTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATc    <  1:742227/143‑1 (MQ=32)
                                                                                                                                       ttATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATcc   <  2:461960/143‑1 (MQ=32)
                                                                                                                                        tATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATccc  <  1:798590/143‑1 (MQ=32)
                                                                                                                                           |                                                                                                                                           
CCCCATGTTAATGACGGCTTTATCTTTCTGGGGCACAGGCTCATTCGCAAACGCAGTCGTTATGGCGAGATGCGAGTGGTCTCAACGATCCCGCAGGAGAAAGCCAGAAACTTCGCCGCATCGCTGACAGCACTGTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCC  >  NC_000913/273816‑274094

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.