New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1226106 =	53 (1.110)	4 (0.090)	3/266	7.2	7.8%	intergenic (‑26/‑494)	minC/ycgJ	inhibitor of FtsZ ring polymerization/uncharacterized protein
	?	NC_000913	1226128 =	45 (1.000)					intergenic (‑48/‑472)	minC/ycgJ	inhibitor of FtsZ ring polymerization/uncharacterized protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TGGATAACCTTAGGTTCTGCCTCATGCAGATGAACCACAGATAAAGTGAAGCTACTGCCTTTAAGCTCGATTGGCGTGTTTGACATCCTGGCCTTACTCAATTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCAGAGTAAAAGTCTATTCTGTGATAAATGGCGCTGATTCATAGCTTAAAAAATACCCTTGTCAATCAACCCAT  >  NC_000913/1225995‑1226266                                                                                                                                      |                                                                                                                                           tGGATAACCTTAGGTTCTGCCTCATGCAGATGATCCACTGATAAAGTGACGCTACGGCCTTTAAGCTCGACTGGCGTGTTTGACATCCTGGCCGTACTCAATTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGa                                                                                                                                   <  2:592812/143‑1 (MQ=255)   gATAACCTTAGGTTCTGCCTCATGCAGATGAACCACAGATAAAGTGAAGCTACTGCCTTTAAGCTCGATTGGCGTGTTTGACATCCTGGCCTTACTCAATTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGacggct                                                                                                                                 >  2:26029/1‑138 (MQ=255)        ccTTAGGTTCTGCCTCATGCAGATGAACCACAGATAAAGTGACGCTACTGCCTTTAAGCTCGATTGGCGTGTTTGACATCCTGGCCTTACTCAATTAGCTATTAATCATCGCCAGTGCGCGATGATGTTCCGAAGACtctacg                                                                                                                            >  2:235241/1‑141 (MQ=255)        ccTTAGGTTCTGCCTCATGCAGATGAACCACAGATAAAGTGAAGCTACTGCCTTTAAGCTCGATTGGCGTGTTTGACATCCTGGCCTTACTCAATTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATCAg                                                                                                                            >  2:388363/1‑143 (MQ=255)          ttAGGTTCTGCCTCATGCAGATGAACCACAGATAAAGTGAAGCTACTGCCTTTAAGCTCGATTGGCGTGTTTGACATCCTGGCCTTACTCAATTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAAGc                                                                                                                          >  2:407292/1‑143 (MQ=255)          tgaGGTGCTGCCTCATGCAGATGAACCACAGAGAAGGTGAAGCTACTGCCTTTAAGCTCGATTGGCGTGTTTGACATCCTGGCCTTACTCAATTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGc                                                                                                                          <  2:742819/141‑1 (MQ=255)           tAGGTTCTGCCTCATGCAGATGAACCACAGATAAAGTGAAGATACTGCCTTTAAGCTCGATTGGCGTGTTTGACCTCCTGGCCTTACTCAATTAGCTATTAATCATCGCCAGCGCGGGATGATGTTCCGAAGACTCTAAGGCa                                                                                                                         >  1:430055/1‑143 (MQ=255)                      tCATGCAGATGAACCACAGATAAAGTGAAGCTACTGCCTTTAAGCTCGATTGGCGTGTTTGACATCCTGGCCTTACTCAATTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCt                                                                                                              <  1:68804/143‑1 (MQ=255)                         tGCAGATGAACCACAGATAAAGTGAAGCTACTGCCTTTAAGCTCGATTGGCGTGTTTGACATCCTGGCCTTACTCAATTAGCTATTAATCATCGCCAGCGCGCGATGGTGTTCCGAAGACTATAAGGCATGTTATATTCTGGa                                                                                                           >  1:211937/1‑143 (MQ=255)                           cAGCTGAACCACAGATTACGTGGAGCTACTGCCTTTAAGCTCGATTGGCGTGTTTGACATCCTGGCCTTACTCAATTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGAtt                                                                                                         <  2:326471/143‑1 (MQ=255)                            aGATGAACCACAGATAAAGTGAAGCTACTGCCTTTAAGCTCGATTGGCGTGTTTGACATCCTGGCCTTACTCAATTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATta                                                                                                        <  1:800091/143‑1 (MQ=255)                             gATGAACCACAGATAAAGTGAAGCTACTGCCTTTAAGCTCGATTGGCGTGTTTGACATCCTGGCCTTACTCAATTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATtat                                                                                                       >  1:852864/1‑143 (MQ=255)                                   ccACAGATAAAGTGAAGCTACTGCCTTTATGCTAGATCCAAGGGCGGGTCACCCTGGCGTTACTCAATCAGCTATGAAGGATGGCGAGCGCGCGGGGAGGTGCCGAAGACTAAAAGGCATGAGATAGGCGGCATTATATTGat                                                                                                 >  2:105775/1‑142 (MQ=255)                                   ccACAGATAAAGTGAAGCTACTGCCTTTAAGCTCGATTGGCGTGTTTGACATCCTGGCCTTACTCAATTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAg                                                                                                 >  1:850013/1‑143 (MQ=255)                                       aGATAGAGCGAAGCTACTGGCTTTAAGCTCGATTGGCGTGTTTGACATCCTGGCCTTACTCAATTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCaa                                                                                             <  2:597564/143‑1 (MQ=255)                                       aGATAAAGTGAAGCTACTGCCTTTAAGCTCGATTGGCGTGTTTGACATCCTGGCCTTACTCAATTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCaa                                                                                             <  2:611348/143‑1 (MQ=255)                                           aaaGTGAAGCTCCTGACTTTAAGCTCGATTGGCGTGTTTGACATCCTGGCCTTACTCAATTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCa                                                                                         <  1:544516/143‑1 (MQ=255)                                           aaaGTGAAGCTACTGCCTTTAAGCTCGATTGGCGTGTTTGACATCCTGGCCTTACTCAATTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCa                                                                                         >  1:563299/1‑143 (MQ=255)                                            aaGTGAAGCTACTGCCTTTAAGCTCGATTGGCGTGTTTGACATCCTGGCCTTGATCGATTAGCAATTAATGAAAAATAGCGCGCGATGATGTTCCGAAGACTCTAAGGCATGTTATAGTCTGGGTTCTATTGGGGCCAGTGAc                                                                                        >  1:406869/1‑143 (MQ=255)                                             tgTGAGGGTACTGCGGTTAGGCTCGATTGGCGTGTGTGGCATCCTGGCGTTACTCAATTAGGTATTAATCATCGCCTGCGCGGGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCAcc                                                                                       <  2:877027/142‑1 (MQ=255)                                             aGTGAAGCTACTGCCTTTAAGCTCGATTGGCGTGTTTGACATCCTGGCCTTACTCGATTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGCAGACTATAAGGCATGTTATAGTCTGGAGTATATTGAGGCAAGtaaag                                                                                       >  2:816008/1‑139 (MQ=255)                                               tGAAGCTACTGCCTTTAAGCTCGATTGGCGTGTTTGACATCCTGGCCTTACTCAATTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCt                                                                                     >  1:773741/1‑143 (MQ=255)                                                    tgaCTTCCTTTAACCTCGCGTGGCGTTGTTGCTATCCCGGCCTTAGTCAATTAGCGATTAATCATCGCGGGCGTGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCAt                                                                                <  2:665581/141‑1 (MQ=255)                                                          ccTTTATGCTCGATGGGCGTGTTTCACATCCTGGCCTTACTCAATTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTATTc                                                                          <  2:876718/143‑1 (MQ=255)                                                           cTTTAAGCTCGAGTGGCGTGTTTGACATCCTGGCCTTACTCAATTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCa                                                                         <  1:713470/143‑1 (MQ=255)                                                            tttAAGCTCGATTGGCGTGTTTGACATCCTGGCCTTACTCAATTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCag                                                                        >  2:241813/1‑143 (MQ=255)                                                             ttAAGCTCGATTGGCGTGTTTGACATCCTGGCCTTACTCAATTAGCTATTAATCATCGCCAGCGCGTGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCgga                                                                       <  2:843570/143‑1 (MQ=255)                                                                  cTCGATTGGCGTGTTTGACATCCTGGCCTTACTCAATTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGAATATATGGGGGCAAGTCACCCTCCCATTTATTCAGAGTaaa                                                                  >  1:365880/1‑143 (MQ=255)                                                                       ttGGCGTGTTTGACATCCTGGCTGCACTCAATTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGCGGCAAGTCACCCTCCCATTTATTCAGAGTAAAAGTCt                                                             >  2:535368/1‑143 (MQ=255)                                                                            gtgtTTGACATCCTGGCCTTACTCAATTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCCAGTCACCCTCCCATTTATTCAGAGTAAAAGTCTATTCt                                                        >  1:445114/1‑143 (MQ=255)                                                                             tgtTTGACATCCTGGCCTTACTCAATTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCAGAGTAAAATTCTATTCtg                                                       >  2:408299/1‑143 (MQ=255)                                                                              gtTTGACATCCTGGCCTTACTCAATTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCAGAGTAAAAGTCTATTCtgt                                                      <  1:779356/143‑1 (MQ=255)                                                                               tttGACATCCTGGCCTTACTCAATTAGCTATTAATCATCGCCAGCGCGCGATGAAGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACACTCCCATTTCTTCAGAGTAAAAGTCTATGCtgtg                                                     >  2:315465/1‑143 (MQ=255)                                                                                    cATCCTGGCCTTACTCAATTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGTGGCTTGTCGCCCTCCCATTTATTCAGAGTAAAAGTCTATTCTGTTATaaa                                                >  1:164134/1‑143 (MQ=255)                                                                                     aTCCTGGCCTTACTCAATTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAGCCATGTTATAGTCTGGATTATATTGAGGCACGACACCCTCCCGTTTAAAGAAATACCAAGTCTCTTCTGTGATAAAt                                               >  1:548541/1‑143 (MQ=255)                                                                                     aTCCTGGCCTTACGCGATTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCAGAGTAAAAGTCTAGTCTGTGATAAAt                                               >  2:395261/1‑143 (MQ=255)                                                                                      tCCTGGCCTTACTCAATTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCAGAGTAAAAGTCTATTCTGTGATAAATg                                              >  1:696887/1‑143 (MQ=255)                                                                                         tGGCCTTACTCAATTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCAGAGTAAAAGTCTATTCTGTGATAAATGgcg                                           <  1:184599/143‑1 (MQ=255)                                                                                              ttACTCAATTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCAGAGTAAAAGTCTATTCTGTGATAAATGGCGCTGAt                                      <  2:472219/143‑1 (MQ=255)                                                                                              ttACTCAATTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCAGAGTAAAAGTCTATTCTGTGATAAATGGCGCTGAt                                      >  2:161041/1‑143 (MQ=255)                                                                                                   cAATTAGCTATGAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCAGAGTAAAAGTCTATTCTGTGATAAATGGCGCTGATTCATa                                 <  1:412345/143‑1 (MQ=255)                                                                                                          cTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTCATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCAGAGTAAAAGTCTATTCTGTGCTCAATGGCACTGATTCATCGCTTaaa                          >  2:9052/1‑143 (MQ=255)                                                                                                           tATTAATCATCGCCATCGCGCGATGATGTTCCGACGACTATAAGGCATGTTATAGTCTGGATTATATTGAGTCAAGTCACCCTCCCATTTATTCAGAGTAAAAGTCTATTCTGTGATAAATGGCGCTGATTCATAGCTTaaaa                         <  1:121991/143‑1 (MQ=255)                                                                                                              tAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCAGAGTAAAAGTCTATTCTGTGATAAATGGCGCTGATTCATAGCTTAAAAAAt                      <  1:858451/143‑1 (MQ=255)                                                                                                               aaTCATCGCCAGCGCGCGATGATGTTCCGAAGCCTATAAGGCATGTTCTCGTCTGGATTCTCTTGAGGCAAGTCACCCTCCCATTTATTCAGAGTAAAAGTCTATTCTGTGATAAATGGCGCTGATTCATAGCTTAAAAAATa                     >  1:26702/1‑143 (MQ=255)                                                                                                                              tctctgctgTTTCTAAGATTATAAGGCATGTTTTAGTCTTGATTATATTTATGCATGTCACCCTTCCATTTATTCATCGTAAAAGTCTATTCTGTGATAAATGGCGCTGATTCATATCTTAAAAAATACCCTTGTCAATCAAc      <  2:440513/136‑1 (MQ=255)                                                                                                                              gcgATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCAGAGTAAAAGTCTATTCTGTGATAAATGGCGCTGATTCATAGCTTAAAAAATACCCTTGTCAATCAAc      >  1:527151/1‑143 (MQ=255)                                                                                                                              gcgATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCAGAGTAAAAGTCTATTCTGTGATAAATGGCGCTGATTCATAGCTTAAAAAATACCCTTGTCAATCAAc      >  1:119590/1‑143 (MQ=255)                                                                                                                                gatgatGTTCCGGAGATCATCAGGCATGTTATAGGCTGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCAGAGTAAAAGTCTATTCTGTGATAAATGGCGCTGATTCATAGCTTAAAAAATACGCTTGTCAATCAAccc    <  2:743449/143‑1 (MQ=255)                                                                                                                                gatgatGTTCCGAAGACTATAAGGCATGTTATAGTCGGGATTATATTGAGGCAGGTCGCCCTCCCATTTATTCAGAGCAAAAGTCTATTCTGTGATAAATGGCGCTGATTCATCGCTTAAAAAATACCCTTGACAATCGAccc    >  2:635914/1‑143 (MQ=255)                                                                                                                                  tgattTTTCAAAGAATATAACGCATGTTATAGTCTGGAGTATATTCAGGCAAGTCACCCTCCCATTTATTCAGAGTAAAAGTCTATTCTGTGATAAATGGCGCTGATTCATAGCTTAAAAAATACCCTTGTCAATCAACCCAt  <  2:31560/143‑1 (MQ=255)                                                                                                                                      |                                                                                                                                           TGGATAACCTTAGGTTCTGCCTCATGCAGATGAACCACAGATAAAGTGAAGCTACTGCCTTTAAGCTCGATTGGCGTGTTTGACATCCTGGCCTTACTCAATTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCAGAGTAAAAGTCTATTCTGTGATAAATGGCGCTGATTCATAGCTTAAAAAATACCCTTGTCAATCAACCCAT  >  NC_000913/1225995‑1226266

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.