| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 1,755,755 | IS5 (+) +4 bp | coding (58‑61/1413 nt) | pykF → | pyruvate kinase I |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1397238 | NA (NA) | 24 (1.200) | 20/284 | 0.1 | 95.9% | noncoding (1195/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | 1755755 = | 1 (0.050) | coding (58/1413 nt) | pykF | pyruvate kinase I | |||||
| * | ? | NC_000913 | = 1755758 | 1 (0.050) | 19 (0.950) | 18/284 | 0.2 | 94.9% | coding (61/1413 nt) | pykF | pyruvate kinase I |
| ? | NC_000913 | = 2102943 | NA (NA) | noncoding (1/1195 nt) | IS5 | repeat region | |||||
GGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAG‑AAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1397098‑1397238‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTAGCTAAAATGCTGGACGCTGGCATGAACGTTATGCGTCTGAACTTCTCTCATGGTGACTATGCAGAACACGGTCAGCGCATTCAGAATCTGCGCAACGTGATGAGCAAAACTGGTAAAACCGCCGCTATCCTGCTTGATA > NC_000913/1755755‑1755896 GGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAG‑AAAAAATCGGCTCCAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAAATTAACCGCTTAATCACACATTCCTT > 1:175965/1‑143 tGCCTTAATTGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACTGGAG‑AAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGCTAAAA < 1:273143/142‑1 TTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAG‑AAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGCTAAAATGCT > 1:159755/1‑143 TTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAG‑AAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGCTAAAATGCT > 2:380326/1‑143 TAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAG‑AAAAAATCGGCTCAAACATGAAGATATGAAATTACTGAGTCAGCAGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGCTAAAATGCTG < 1:99068/143‑1 AAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGTGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGCTAAAATGCTG < 1:191934/143‑1 AAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAG‑AAAAAATCGGCTCAAACATGAAGAAGTGTGTTGCCACAAACAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGCTAAAATGCTGG > 1:82344/1‑143 GCTGATTCAAGGCATTTACGGGAG‑AAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTAAGCAGAGAAGAATTTACCCGCTTAATAGGAACTTCCTTAGCTAAAATGCGGGACGCTGGCATGAACGTTGTGggggtg > 2:215336/1‑137 TCAAGGCATTTACGGGAG‑AAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAACTAAAATGCTGAACGCTGACATGAACGAAAAGCGCCTGAACagc > 1:270816/1‑140 AAGTCATTTACGGAAG‑AAACATTCGGCTCATACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTGCCCCGCTTATTCGCACCTTCCTTAGCTAAAATGCTGGACGCTGGCATGAACGTTATGCGTCTGAACTTCTC < 1:156295/143‑1 GCATTTACGGGAG‑AAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAAACAGCCGAGAAGAATATCCCCGGTTATTCGCAACTTACTTAGCTAAAATGCTGGACGCTAGCCTGAACGTTATACGTCTTAACTTATCTCA > 2:170350/1‑143 TTTACGGGAG‑AAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCAAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGCTAAAATGCTGGACGCTGGCATGAACGTTATGCGTATGAACTTCTCTCAAGG > 2:284950/1‑143 TCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGCTAAAATGCTGGCCGCTGGCATGACCGTTATGCGTCTGAAATTCTCTCATAGAGACTATGCAAAACACGGTaa > 1:127595/1‑141 GAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCATTAGCCAAAATGCTGCACGCTGGCATGAACGTTATGCGTCTGAACTCATCTCATGGTGACGATGCAGAACACGCGCAGCCGATTCAGAATCcg > 2:374095/1‑141 AAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGCTAAAATGCTGGACGCTGGCATGAACGTTATGCGTCTGAACTTCTCTCATGGTGACTATGCAGAACACGGTCAGCGCATTCAGAATCTGC < 1:260392/143‑1 AGTCAGCCGAGAAGAAGTTCCCCGCTTATTCGCACCTTCCTTAGCTAAAATGCTGGACGCTGGCATGAACGTTATGCGTCTGAACTTCTCTCATGGTGACTATGCAGAACACGGTCAGCGCATTCAGAATCTGCGCAACGTGA < 2:151389/143‑1 gCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGCTAAAATGCTGGACGCTGGCATGAACGTTATGCGTCTGAACTTCTCTCATGGTGACTATGCAGAACACGGTCAGCGCATTCAGAATCTGCGCAACGTGATG < 2:82344/142‑1 AAGATTTTCGCCGCTTATTCGCCCCTTCCTTAGCTAAAATGCTGGACGCTGGCATGAACGTTATGCGTCTGAACTTCTCTCATGGTAACTATGCAGAACACGGTCAGCGCAGTCAGAACCTGCGCAACGTGATGAGCAAAACa > 2:358793/1‑142 AATTTCCCCGCTTATTCGCACCTTCCTTAGCTAAAATGCTGGACGCTGGCATGAACGTTATGCGTCTGAACTTCTCTCATGGTGACTATGCAGAACACGGTCAGCGCATTCAGAATCTGCGCAACGTGATGAGCAAAACTGGT < 2:225426/143‑1 CGCACCTTCCTTAGCTAAAATGCTGGACGCTGGCATGAACGTTATGCGTCTGAACTTCTCTCATGGTGACTATGCAGAACACGGTCAGCGCATTCAGAATCTGCGCAACGTGATGAGCAAAACTGGTAAAAACGCCGCTATCa > 2:16709/1‑142 tCTTCCTTAGCTACGATGCTGGACGCTGGCATGAACGTTATGCGTCTGAACTTCTCTCATGGTGACTATGCAGAACACGGTCTGCGCATTCAGAATCTGCGCAACGTGATGAGCAAAACTGGTAAAACCGCCGCTATCCTGCT < 2:240599/142‑1 gCCTTAGCTAGAGTGCTGGACGCGGGCGTGAACGTTTTGCGTCTGAACTTCTCTCATGGTGACTGTGCAGAACGCGGTCAGCGCATTCAGAATCTGCGCAACGTGATGAGCAAAACTGGTAAAACCGCCGCTATCCTGCTTGA < 2:151026/142‑1 CTTAGCTAAAGTGCTGGACGCTGGCATGAACGTTATGCGTCTGAACTTCTCTCATGGTGACTATGCAGAACACGGTAAGCGCATTCAGAATCTGCGCAACGTGATGAGCAAAACTGGTAAAACCGCCGCTATCCTGCTTGATA < 1:158357/143‑1 CTTAGCTAAAATGCTGGACGCTGGCATGAACGTTATGCGTCTGAACTTCTCTCATGGTGACTATGCAGAACACGGTCAGCGCATTCAGAATCTGCGCAACGTGATGAGCAAAACTGGTAAAACCGCCGCTATCCTGCTTGATA < 1:198928/143‑1 GGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAG‑AAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1397098‑1397238‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTAGCTAAAATGCTGGACGCTGGCATGAACGTTATGCGTCTGAACTTCTCTCATGGTGACTATGCAGAACACGGTCAGCGCATTCAGAATCTGCGCAACGTGATGAGCAAAACTGGTAAAACCGCCGCTATCCTGCTTGATA > NC_000913/1755755‑1755896 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |