mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.32.0 revision 6ff6de7d1b87
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (sorted from low to high skew) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3814362 | 125 (0.950) | 3 (0.020) | 3/478 | NT | 2.2% | coding (432/456 nt) | dut | deoxyuridinetriphosphatase |
| ? | NC_000913 | = 3815440 | 153 (1.220) | coding (328/642 nt) | pyrE | orotate phosphoribosyltransferase | |||||
| * | ? | NC_000913 | = 3607577 | 134 (1.020) | 3 (0.020) | 3/486 | NT | 2.4% | coding (1128/2199 nt) | zntA | zinc, cobalt and lead efflux system |
| ? | NC_000913 | = 3607669 | 114 (0.900) | coding (1220/2199 nt) | zntA | zinc, cobalt and lead efflux system | |||||
| * | ? | NC_000913 | = 2414508 | 161 (1.220) | 3 (0.020) | 3/492 | NT | 1.8% | coding (1041/1203 nt) | ackA | acetate kinase A and propionate kinase 2 |
| ? | NC_000913 | 2414518 = | 163 (1.270) | coding (1051/1203 nt) | ackA | acetate kinase A and propionate kinase 2 | |||||
| * | ? | NC_000913 | 2268432 = | 144 (1.090) | 3 (0.020) | 3/488 | NT | 2.3% | coding (606/987 nt) | yeiR | Zn‑stimulated GTPase involved in zinc homeostasis, mutants are cadmium and EDTA sensitive, Zn(2+) binding protein |
| ? | NC_000913 | 2268513 = | 113 (0.880) | coding (687/987 nt) | yeiR | Zn‑stimulated GTPase involved in zinc homeostasis, mutants are cadmium and EDTA sensitive, Zn(2+) binding protein | |||||
| * | ? | NC_000913 | = 1427373 | 119 (0.930) | 3 (0.020) +GCA |
3/484 | NT | 2.4% | pseudogene (920/933 nt) | tmpR | Rac prophage, pseudogene, tail protein family,Phage or Prophage Related, putative alpha helix protein |
| ? | NC_000913 | 1427374 = | 125 (0.950) | pseudogene (921/933 nt) | tmpR | Rac prophage, pseudogene, tail protein family,Phage or Prophage Related, putative alpha helix protein | |||||
| * | ? | NC_000913 | 1297359 = | 155 (1.170) | 3 (0.020) | 3/482 | NT | 2.1% | coding (763/2676 nt) | adhE | fused acetaldehyde‑CoA dehydrogenase/iron‑dependent alcohol dehydrogenase/pyruvate‑formate lyase deactivase |
| ? | NC_000913 | = 1297355 | 137 (1.090) | coding (767/2676 nt) | adhE | fused acetaldehyde‑CoA dehydrogenase/iron‑dependent alcohol dehydrogenase/pyruvate‑formate lyase deactivase | |||||
| * | ? | NC_000913 | 650523 = | 179 (1.360) | 4 (0.030) | 3/492 | NT | 2.2% | coding (261/297 nt) | citD | citrate lyase, acyl carrier (gamma) subunit |
| ? | NC_000913 | 650539 = | 174 (1.350) | coding (245/297 nt) | citD | citrate lyase, acyl carrier (gamma) subunit | |||||
| * | ? | NC_000913 | = 63191 | 143 (1.080) | 3 (0.020) | 3/482 | NT | 2.2% | coding (74/2907 nt) | rapA | RNA polymerase remodeling/recycling factor ATPase, RNA polymerase‑associated, ATP‑dependent RNA translocase |
| ? | NC_000913 | 63749 = | 129 (1.020) | coding (2032/2352 nt) | polB | DNA polymerase II | |||||