New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 458787 =3 (0.050)64 (1.020) 52/278 0.1 95.6% intergenic (+87/‑101) clpX/lon ATPase and specificity subunit of ClpX‑ClpP ATP‑dependent serine protease/DNA‑binding ATP‑dependent protease La
?NC_000913 608011 = NA (NA)intergenic (+23/‑54) hokE/insL1 toxic polypeptide, small/IS186 transposase

GGCAATACGGGGATTTCAATGCGTTCAGAACGCTCAGGATTCATAGAGCTCTCTCTTAGTTTAATTTCCGCCAGGTAATCAGATGACACGACTGTGCTTCACGCCATCTATTAACATGTACGTCAGTATATGGGGATGTTTCCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/458931‑458787
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGGGG  >  NC_000913/608011‑608152
                                                                                                                                                                                                                                                                                                
GGCAATACGGGGATTTCAATGCGTTCAGAACGCTCAGGATTCATAGAGCTCTCTCTTAGTTTAATTTCCGCCAGGTAATCAGATGACACGACTGTGCTTCACGCCATCTATTAACATGTACGTCAGTATATGGGGATGTTTCC                                                                                                                                                  >  2:892215/1‑143
 GCAATACGGGGATTTCAATGCGTTCAGAACGCTCAGGATTCATAGAGTTCTCTCTTAGTTTAACTTCCGCCAGGTAATCAGATGACACGACTGTGCTTCACGCCATCTATTAACATGTACGTCAGTATATGGGGATGTTTCCC                                                                                                                                                 <  2:873099/143‑1
 GCAATACGGGGATTTCAATGCGTTCAGAACGCTCAGGATTCATAGAGCTCTCTCTTAGTTTAATTTCCGCCAGGTAATCAGATGACACGACTGTGCTTCACGCCATCTATTAACATGTACGTCAGTATATGGGGATGTTTCCC                                                                                                                                                 <  2:53688/143‑1
 GCAATACGGGGATTTCAATGCGTTCAGAACGCTCAGGATTCATAGAGCTCTCTCTTAGTTTAATTTCCGCAACGTTAGCAGATGACACGACTGTGCTTCACGCCATCTATTAACATGTACGTCAGTATATGGGGATGTTTCCC                                                                                                                                                 <  2:418391/143‑1
        GGGGATTTCAATGCGTTCAGAACGCTCAGGATTCATAGAGCTCTCTCTTAGTTTAATTTCCGCCAGGTAATCAGATGACACGACTGTGCTTCACGCCATCTATTAACATGTACGTCAGTATATTGCGTTGTTTTCCCTTAAGC                                                                                                                                          >  2:858542/1‑143
         GGGATTTCAATGCGTTCAGAACGCTCAGGATTCATAGAGCTCTCTCTTAGTTTAATTTCCGCCAGGTAATCAGATGACACGACTGTGCTTCACGCCATCTATTAACATGTACGTCAGTATATGGGGATGTTTCCCCATAAGCG                                                                                                                                         >  1:126225/1‑143
                CAATGCGTTCAGAACGCTCAGGATTCATAGAGCTCTCTCTTAGTTTAATTTCCGCCAGGTAATCAGATGACACGACTGTGCTTCACGCCATCTATTAACATGTACGTCAGTATATGGGGATGTTTCCCCATAAGCGCTAACTT                                                                                                                                  <  2:952175/143‑1
                  ATGCGTTCAGAACGCTCAGGATTCATAGAGCTCTCTCTTAGTTTAATTTCCGCCAGGTAATCAGATGACACGACTGTGCTTCACGCCATCTATTAACATGTACGTCAGTATATGGGGATGTTTCCCCATAAGCGCTAACTTAA                                                                                                                                <  2:105141/143‑1
                   TGCGTTCAGAACGCTCAGGATTCATAGAGCTCTCTCTTAGTTTAATTTCCGCCAGGTAATCAGATGACACGACTGTGCTTCACGCCATCTATTAACATGTACGTCAGTATATGGGGATGTTTCCCCATAAGCGCTACCCTAAG                                                                                                                               >  1:671987/1‑143
                   TGCGTTCAGAACGCTCAGGATTCATAGAGCTCTCTCTTAGTTTAATTTCCGCCAGGTAATCAGATGACACGACTGTGCTTCACGCCATCTATTAACATGTACGTCAGTATATGGGGATGTTTCCCGTAAGCGGTTACTTTAGG                                                                                                                              >  2:410027/1‑143
                    GCGTTCAGAACGCTCAGGATTCATAGAGCTCTCTCTTAGTTTAATTTCCGCCAGGTAATCAGATGACACGACTGTGCTTCACGCCATCTATTAACATGTACGTCAGTATATGGGGATGTTTCCCCATAAGCGCTAACTTAAGG                                                                                                                              <  1:311945/143‑1
                      GTTCAGAACGCTCAGGATTCATAGAGCTCTCTCTTAGTTTAATTTCCGCCAGGTAATCAGATGACACGCCTGTGCTTCACGCCATCTATTAACATGTACGTCAGTATATGGGGATGTTTCCCCATAAGCGCTAACTTAAGGGa                                                                                                                            >  2:1039999/1‑142
                          AGATCGATCAGGAGTCATAGAGCTCGCTCTTACTTTAATTTCCGCCAGGTAATCAGATGACACGACTGTGCTTCACGCCAGCTATTAACATGTACGTCAGTATATGGGTATGTTTCCCCATAAGCGCTAACTTAAGGGTTGTG                                                                                                                        <  2:721057/143‑1
                                CTCAGGATTCATAGAGCTCTCTCTTAGTTTAATTTCCGCCAGGTAATCAGATGACACGACTGTGCTTCACGCCATCTATTAACATGTACGTCAGTATATGGGGATGTTTCCCCATAAGCGCTAACTTAAGGGTTGTGGTATTA                                                                                                                  <  2:967682/143‑1
                                 TCAGGATTCATAGAGCTCTCTCTTAGTTTAATTTCCGCCAGGTAATCAGATGACACGACTGTGCTTCACGCCATCTCACACAGTAAAGCGTGGTATATGGGGATGTTTCCCCATAAGCGCTAACTTAAGGGTTGTGGTATTAC                                                                                                                 >  2:513776/1‑143
                                   AGGATTCATAGAGCTCTCTCTTAGTTTAATTTCCGCCAGGTAATCAGATGACACGACTGTGCTTCACGCCATCTATTAACATGTACGTCAGTATATGGGGATGTTTCCCCATAAGCGCTAACTTAAGGGGTGTGGTATTAGGC                                                                                                               >  2:477847/1‑143
                                        gCATAGAGCTCTCTCTTAGTTTAATTTCCGCCAGGTAATCAGATGACACGACTGTGCTTCACGCCATCTATTAACATGTACGTCAGTATATGGGGATGTTTCCCCATAAACGCTAACTTAAGGGTTGTGGTATTACGCCTGAT                                                                                                          <  1:900321/142‑1
                                          ATAGAGCTCTCTCTTAGTTTAATTTCCGCCAGGTAAACAGATGACACGACTGTGCTTCACGCCATCTATTAACATGTACGTCAGTATATGGGGATGTTTCCCCATAAGCGCTCACTTAAGGGTTGTGGTATTACGCCTGATAT                                                                                                        >  2:720802/1‑143
                                             GAGCTCGCTCGTAGTTTTATTTCCGCCAGGTAATCAGATGACACGACTGTGCTTCACGCCATCTATTAACATGTACGTCAGTATATGGGGATGTTTCCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGAT                                                                                                     <  1:577706/143‑1
                                                CTCTCTCTTAGTTTAATTTCCGCCAGGTAATCAGATGACACGACTGTGCTTCACGCCATCTATTAACATGTACGTCAGTATATGGGGATGTTTCCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTA                                                                                                  >  1:1045767/1‑143
                                                 TCTCGCTTAGTTTAATTTCCGCCAGGTAATCAGGTGACACGACTGTGCTTCACGCCATCTATTAACATGTACGTCAGTATATGGGGATGTTTCCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAA                                                                                                 <  1:1118846/143‑1
                                                     TCTTAGTTTAATTTCCGCCAGGTAATCAGATGACACGACTGTGCTTCACGCCATCTATTAACATGTACCTCAGTATATGGGCATGTTTCCCCATAACCGCTCACTTACGGGTTGCGGTCTTACGCCCGATATGATTTAACGcg                                                                                             >  1:148606/1‑141
                                                      CTTAGTTTCATTTCCGCCAGGTAATCAGATGACACGACTGTGCTTCACGCCATCTATTAACATGTACGTCAGTATATGGGGATGTTTCCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGC                                                                                            <  1:464669/143‑1
                                                      CTTAGTTTAATTTCCGCCAGGTAATCCGATGACACGACTGTGCTTCACGCCATCTATTAACATGTACGCCAGTATCTGGGGCTGTTTCCCCATCAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGCTTTAACGcga                                                                                            >  1:1066247/1‑140
                                                         AGTTTAATTTCCGCCAGGTAATCAGATGACACGACTGTGCTTCACGCCATCTATTAACATGTACGTCAGTATATGGGGATGTTTCCCCATAAGCGCTAACTTCAGGGTTGTGGTATTACGCCTGAAATGATTTAACGTGCCGA                                                                                         >  1:346918/1‑143
                                                         AGTTTAATTTCCGCCAGGTAATCAGATGACACGACTGTGCTTCACGCCATCTATTAACATGTACGTCAGTATATGGGGATGTTTCCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGA                                                                                         >  2:640005/1‑143
                                                           TTTAATTTCCGCCAGGTAATCAGATGACACGACTGTGCTTCACGCCATCTATTAACATGTACGTCAGTATATGGGGATGTTTCCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATG                                                                                       >  2:194232/1‑143
                                                              AATTTCCGCCAAGTAAGCACATGACACGACTGTGCTACACGCCAGCTAGTAACATGTAAGTCAGTATATGGGGATGTTTCCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAAT                                                                                    <  2:63832/143‑1
                                                               ATTTCCGCCAGGTAATCAGATGACACGACTGTGCTTCACGCCATCTATTAACATGTACGTCAGTATATGGGGCTGTTTCCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGACTTAACGTGCCGATGAATT                                                                                   >  1:81994/1‑143
                                                                      CCAGGTAATCAGATGACACGACTGTGCTTCACGCCATCTATTAACATGTACGTCAGTATATGGGGATGTTTCCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCA                                                                            <  2:707602/143‑1
                                                                      CCAGGTAATCAGATGACACGACTGTCCTTCACGCCATCTATTAACATGTACGTCAGTATATGGGGATGTTTCCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCA                                                                            <  1:400833/143‑1
                                                                      CCAGGTAATCAGATAGGATGAGTGTGCTTCACGCCATCTATTAACATGTACGTCAGTATATGGGGATGTTTCCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCA                                                                            <  1:122245/143‑1
                                                                      CCAGGTAAGGAGATGACCCGACTGTGCTTCACGCCATCTAGTAACGTGTACGTCAGTATGTGGGGATGTTTCCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTTATATGATTTAACGTGCCGATGAATTACTCTCA                                                                            <  1:1101829/143‑1
                                                                      CCAGGTAAGCAGATGACACGACTTTGCTTCACGCCATCTATTAACATGTACGTCAGTATATGGGGATGTTTCCCCATAAGCGCTAATTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCA                                                                            <  2:1070709/143‑1
                                                                        AGGTAATCAGATGACACGACTGTGCTTCACGCCATCTATTAACATGTACGTCAGTATATGGGGATGTTTCCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACG                                                                          >  2:894562/1‑143
                                                                            AATCAGATGACACGACTGTGCTTCACGCCATCTATTAGCATGTACGTCAGTATATGGGGATGTTTCCCCATACGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAA                                                                      <  2:156066/143‑1
                                                                             ATCAGATGACACGACTGTGCTTCACGCCATCTATTAACATGTACGTCAGTATATGGGGATGTTTCCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAAC                                                                     <  2:729099/143‑1
                                                                                 GATGCCACGACTGTGCTTGACGCCATCTATTAACATGTACGGCAGTATATGGGGATGTTTCCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGT                                                                 <  1:1069795/143‑1
                                                                                 GATGACACGACTGTGCTTCACGCCATCTATTAACATGTACGTCAGTATATGGGGATGTTTCCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGT                                                                 <  2:162129/143‑1
                                                                                    GACACGACTGTGCTTCACGCCATCTATTAACATGTACGTCAGTATATGGGGATGTTTCCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAG                                                              >  2:511714/1‑143
                                                                                      CACGACTGTGCTTCACGCCATCTATTAACATGTACGTCAGTATATGGGGATGTTTCCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCA                                                            >  2:80072/1‑143
                                                                                         GACTGTGCTGCACGCCATCTATTAACATGTACGTCAGTATATGGGTATGTTTCCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATT                                                         <  2:19444/143‑1
                                                                                            TGTGCTTCACGCCATCTATTAACATGTACGTCAGTATATGGGGATGTTTCCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTG                                                      >  2:121215/1‑143
                                                                                             GTGCTTCACGCCATCTATTAACATGTACGTCAGTATATGGGGATGTTTCCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGG                                                     <  1:892215/143‑1
                                                                                                 TTCACGCCATCTATTAACATGTACGTCAGTATATGGGGATGTTTCCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCA                                                 >  2:731478/1‑143
                                                                                                  TCACGCCATCTATTAACATGTACGTCAGTATATGGGGATGTTTCCCCATAAGCGCTAACTTAAGGGATGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCAT                                                >  2:378532/1‑143
                                                                                                    ACGCCATCTATTAACATGTACGTCAGTATATGGGGATGTTTCCCCATAAGCGCTAACTTAGGAGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATct                                              >  1:131719/1‑141
                                                                                                         ATCTATTAACATGTACGTCAGTATATGGGGATGTTTCCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCCACTCCGGCCCATCTTGGTA                                         >  1:382610/1‑143
                                                                                                         ATCTATTAACATGTACGTCAGTATATGGGGATGTTTCCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTA                                         >  2:493379/1‑143
                                                                                                            TATTAACATGTACGTCAGTATATGGGGATGTTTCCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGC                                      >  2:858952/1‑143
                                                                                                            TATTAACATGTACGTCAGTATATGGGGATGTTTCCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATATAGCGCATGATATCTGGTCAGCAATTCTGGCCGATCTAGGTAAGa                                      >  1:788589/1‑142
                                                                                                             ATTAACATGTACGTCAGTATATGGGGATGTTTCCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCC                                     <  2:1018803/143‑1
                                                                                                                 gttTGTACGTCAGGATATGTCGATGTTTCCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAA                                 <  1:431063/140‑1
                                                                                                                 ACATGTACGTCAGTATATGGGGATGTTTCCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCAGATTGGTAAGCCCGAA                                 >  1:1012092/1‑143
                                                                                                                     ggACGTCAGTATATGGGGATGTTTCCCCATAAGCGCTAACTTGAGGGTTGTGGTATTACGCCTGATATGATTTAACGCGCCGATGACTTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAAC                             <  1:89674/141‑1
                                                                                                                      TACGTCAGTATATGGGGATGTTTCCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACT                            <  2:599404/143‑1
                                                                                                                      TACGTCAGTATATGGGGATGTTTCCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACT                            >  1:818400/1‑143
                                                                                                                       ACGTCAGTATATGGGGATGTTTCCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTG                           >  2:499905/1‑143
                                                                                                                       ACGTCAGTATATGGGGATGTTTCCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCAATATTGGTAAGCCCGAAGAACTG                           >  2:958592/1‑143
                                                                                                                         CGTCAGTATATGGGGATGTTTCCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGG                          >  2:893393/1‑143
                                                                                                                          GTCAGTATATGGGGATGTTTCCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGCAATGATTTAACGTGCCGATGAATTACTCTCACGACAACTAGTCAGCAAATCTGGCCCATAGTGGTAAGCCCGAAGAGCTGta                         >  1:68485/1‑141
                                                                                                                          GTCAGTATATGGGGATGTTTCCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGCATTACTCTCACGATAACTGGTCAGCAATCCTGGCCCATATTAGTAAGCCCGAAGACCTGGA                         >  1:310133/1‑143
                                                                                                                               tagATGGGGATGTTGCCCCAGAAGCGCTGACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGAGGAATTACTCTCACGACTTCTAGGCATCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTT                    <  1:1094289/140‑1
                                                                                                                                 TATGGGGATGTTTCCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTtg                  >  2:804167/1‑141
                                                                                                                                      GGATGTTTCCCCATAAGCGCTAACTTAAGCGTTGTGGTATTACGCCTGATATGCTTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAAGTCTGGCCCATATTGGTAAGCCCGCAGCACTCGATACTCCGGCcgg             >  1:809332/1‑140
                                                                                                                                         gttgttgCCATAAGCGCTACCTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAA          <  1:99358/136‑1
                                                                                                                                            TTCCCCATAAGCGCTAACTTACGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTACTGC       >  1:168135/1‑143
                                                                                                                                            TTCCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCAATGTTGGTCAGCCCCACGAACTGGCTCCTTCGGCCCGTAcggc       >  2:366781/1‑139
                                                                                                                                             TCCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATAAGATTTAACGTGCCGATGAGTTACTCTACCGATAAATGGTCAGCAATCCTGGCCCATATTGGAAAGCCCGAAGAACTGGATACTACGGCACGTAAAGCg      >  1:481279/1‑142
                                                                                                                                               CCCATAAGCGCTAACTGAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGG    <  2:528101/143‑1
                                                                                                                                                CCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGGG   >  2:210854/1‑143
                                                                                                                                                CCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATGTTACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGGG   >  2:767203/1‑143
                                                                                                                                                 CATAAGCGCTCACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATCACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGGGG  <  2:234420/143‑1
                                                                                                                                                 CATAAGCGCTAACTTAAGGGGTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGACTTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGGGG  <  1:241008/143‑1
                                                                                                                                                                                                                                                                                                
GGCAATACGGGGATTTCAATGCGTTCAGAACGCTCAGGATTCATAGAGCTCTCTCTTAGTTTAATTTCCGCCAGGTAATCAGATGACACGACTGTGCTTCACGCCATCTATTAACATGTACGTCAGTATATGGGGATGTTTCCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/458931‑458787
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGGGG  >  NC_000913/608011‑608152

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.