New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 12994980 (0.000)80 (1.280) 67/276 0.0 100% intergenic (+253/‑1684) ychE/oppA UPF0056 family inner membrane protein/oligopeptide ABC transporter periplasmic binding protein
?NC_000913 1300698 = 0 (0.000)intergenic (+1453/‑484) ychE/oppA UPF0056 family inner membrane protein/oligopeptide ABC transporter periplasmic binding protein

AAATTACAGTTAGTTATAAGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTT  >  NC_000913/1299356‑1299640
                                                                                                                                              |                                                                                                                                              
aaaTTACAGTTAGTTATAAGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGCCTTGCTGAAGAATAATTGAAATGCTATTATTAATTCCACTGCCTTTAGTAGAGGAAAGTACTAA                                                                                                                                                >  1:901635‑M1/1‑143 (MQ=255)
   tttcagtTTGTTATATTGATTTCCTTAACTGCTTCTCCTCACCTTCATGTTATTTTCGCCATATCATAATCCTGGGCTCGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGCTAGAGGAAAGTGCTAAata                                                                                                                                             <  1:823608‑M1/140‑4 (MQ=255)
      cAGTTAGTTATAAGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataata                                                                                                                                          <  1:613742‑M1/143‑7 (MQ=255)
            gttaTAAGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaat                                                                                                                                    <  2:274816‑M1/143‑13 (MQ=255)
             ttaGAAGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaatt                                                                                                                                   <  1:26224‑M1/143‑14 (MQ=255)
              tataAGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattg                                                                                                                                  >  2:369128‑M1/1‑129 (MQ=255)
                taAGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCTACTGCCTTTGGTAGAGGAAAGTGCTAAttaatcactcattgtt                                                                                                                                >  1:1015138‑M1/1‑127 (MQ=255)
                taAGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTAGCCACATCATAATCCTGGGCTTGGTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCGTTGGTAGAGGAAAGTGCTAAataataatcaattgtt                                                                                                                                >  2:196463‑M1/1‑127 (MQ=255)
                  aGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGTCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaa                                                                                                                              <  2:543311‑M1/143‑19 (MQ=255)
                   ggATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaa                                                                                                                             <  2:552811‑M1/143‑20 (MQ=255)
                   ggATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGCCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaca                                                                                                                             >  1:120834‑M1/1‑124 (MQ=255)
                   ggATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAAGCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaa                                                                                                                             <  2:1042579‑M1/143‑20 (MQ=255)
                    gATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttcaat                                                                                                                            >  1:282816‑M1/1‑123 (MQ=255)
                    gATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaat                                                                                                                            >  2:779807‑M1/1‑123 (MQ=255)
                        tCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattatt                                                                                                                        >  2:325003‑M1/1‑119 (MQ=255)
                        tCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAACCCTTGGCTTGCTGAAGAATAATTGAACTGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattatt                                                                                                                        <  2:827120‑M1/143‑25 (MQ=255)
                         ccTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattg                                                                                                                       >  2:1067350‑M1/1‑118 (MQ=255)
                          cgtgactgcTTCTCCTCGCCATCGTGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgt                                                                                                                      <  1:511400‑M1/139‑27 (MQ=255)
                           ttAACTGCTTCTCCTCACCATCCTGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattatggtg                                                                                                                     >  1:564841‑M1/1‑116 (MQ=255)
                           ttAACTGCTTCTCCTCACCATCATGTTATTTTCGTCACATCCTATTTCTGGGCTTGCTGAAGCATAATTGACCTGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattatg                                                                                                                     >  1:152852‑M1/1‑116 (MQ=255)
                           ttAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattcttgtg                                                                                                                     >  2:559580‑M1/1‑116 (MQ=255)
                               cTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAatactaatcaattgttaaattattgtgcatt                                                                                                                 >  1:381351‑M1/1‑112 (MQ=255)
                                tGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcattt                                                                                                                >  1:520903‑M1/1‑111 (MQ=255)
                                tGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCGTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcattt                                                                                                                <  2:813303‑M1/143‑33 (MQ=255)
                                  cTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGACTAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttca                                                                                                              >  2:819042‑M1/1‑109 (MQ=255)
                                    tctcCTCACCATCATCTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcactcgttaaattattgtgcatttcact                                                                                                            >  1:944895‑M1/1‑107 (MQ=255)
                                      tcctcACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatgtcactac                                                                                                          >  2:467294‑M1/1‑105 (MQ=255)
                                         tcACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAatactaatcaatcgttaaattattgtgcatttcactactgg                                                                                                       >  1:228674‑M1/1‑102 (MQ=255)
                                           aCCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaatcgttaaattattgtgcatttcactactgtaa                                                                                                     >  1:992745‑M1/1‑100 (MQ=255)
                                             catcatGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaact                                                                                                   >  2:274586‑M1/1‑98 (MQ=255)
                                             catcatGGTATTTTCGCCACATCATAATCCTGGGCGTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaact                                                                                                   <  2:720319‑M1/143‑46 (MQ=255)
                                                cacgttaTTTTCGTCACATCATAATCCTGGGCGCTGTTAGTAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgta                                                                                                <  1:488995‑M1/140‑49 (MQ=255)
                                                  tGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaat                                                                                              >  1:804199‑M1/1‑93 (MQ=255)
                                                   gTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatc                                                                                             >  1:784853‑M1/1‑92 (MQ=255)
                                                    ttATTTTCGCCACATCATAATCTTGGGCTTGATGAAGAATAATTGAAATGATATTATTAATTCTACTGCGTTTGGTAGAGGAAAGTGATAAataataatcaattgttaaattattgtgcatttcactactggaactgtaataa                                                                                            >  1:318530‑M1/1‑91 (MQ=255)
                                                    ttATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatca                                                                                            <  2:823325‑M1/143‑53 (MQ=255)
                                                    gtaTTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGAAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatca                                                                                            >  2:133102‑M1/2‑91 (MQ=255)
                                                       ttttCGCCACATCAGAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcgtttcactactggaactgtaagcagaa                                                                                         >  2:676237‑M1/1‑88 (MQ=255)
                                                        tttCGCCACGTCATAGTGCTGGTCTTGCCTAAGAATAAGTGAAATGATATTATTAATTCCACTGCCTGTGGTAGAGGGAAGTGCTAAataataatcaagtgttaaattattgtgcatttcactactggaactgtaatcagaaa                                                                                        <  1:91637‑M1/143‑57 (MQ=255)
                                                        tttCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaa                                                                                        <  2:616312‑M1/143‑57 (MQ=255)
                                                         ttCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaa                                                                                       >  2:1022814‑M1/1‑86 (MQ=255)
                                                          tCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaag                                                                                      >  2:631082‑M1/1‑85 (MQ=255)
                                                             ccACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagata                                                                                   <  1:608384‑M1/143‑62 (MQ=255)
                                                             ccACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagata                                                                                   <  2:838039‑M1/143‑62 (MQ=255)
                                                                catcatAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcgtttcactactggaactgtaatcagaaaagatagac                                                                                >  1:303103‑M1/1‑79 (MQ=255)
                                                                 atcatAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTCGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcaatactgaaactgtaatcagaaaagaaagaca                                                                               >  1:122307‑M1/1‑78 (MQ=255)
                                                                 atcatAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagaca                                                                               >  1:928413‑M1/1‑78 (MQ=255)
                                                                  tcatAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacat                                                                              <  2:236972‑M1/143‑67 (MQ=255)
                                                                       aTCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgctta                                                                         <  2:557862‑M1/143‑72 (MQ=255)
                                                                        tCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttag                                                                        <  1:920232‑M1/143‑73 (MQ=255)
                                                                          cTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggacctgtaatcagtacaggaatacatgcttagcc                                                                      >  1:173991‑M1/1‑69 (MQ=255)
                                                                              gCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatc                                                                  >  2:834523‑M1/1‑65 (MQ=255)
                                                                                ttGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaacagatagacatgcttagcccatctc                                                                >  1:212629‑M1/1‑63 (MQ=255)
                                                                                   cTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctat                                                             <  2:85726‑M1/143‑84 (MQ=255)
                                                                                       agaaTAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttga                                                         >  1:750494‑M1/1‑56 (MQ=255)
                                                                                         aatgggtgaaaggATAGTATTAATTCCCCTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgatt                                                       <  1:221357‑M1/137‑90 (MQ=255)
                                                                                                  aaTGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaa                                              <  2:1027364‑M1/143‑99 (MQ=255)
                                                                                                     gATATTATTAATTCCACTGCCTTTGGTATACGCACGTCCGAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagat                                           <  1:600348‑M1/143‑102 (MQ=255)
                                                                                                      atatTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatg                                          <  2:855732‑M1/143‑103 (MQ=255)
                                                                                                        agttgtaattccACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttagattattgtgcatttcactactggaactgtaatcagaaaagatagacaggctgagccaatctctatttgattgaattgaaagatgtt                                        <  1:849452‑M1/138‑105 (MQ=255)
                                                                                                         ttattaATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctctttgattgaattgaaagatgttt                                       >  2:545361‑M1/1‑38 (MQ=255)
                                                                                                         ttattaATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgttt                                       >  2:852502‑M1/1‑38 (MQ=255)
                                                                                                         ttattaATTCCACTGCCTTTGGTAGAGGAAAGGGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgttt                                       >  2:826024‑M1/1‑38 (MQ=255)
                                                                                                           gttgtttctactGCCTTCGGGAGAGGCAAGTTCTACataatcagcaattgtttaattactgtgcatttcactacttgaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgt                                     <  2:245542‑M1/138‑108 (MQ=255)
                                                                                                           attaATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttacccaatctatatttgattgaattgaaagatgttttt                                     >  1:90684‑M1/1‑36 (MQ=255)
                                                                                                              aaTTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaa                                  <  1:819042‑M1/143‑111 (MQ=255)
                                                                                                                    aCTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatccctttttggttgaattgaaagatgttagttaaagcatg                            >  1:479617‑M1/1‑27 (MQ=255)
                                                                                                                    aCTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactgaaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatg                            >  1:1061593‑M1/1‑27 (MQ=255)
                                                                                                                      tGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacgtggttggcgaatctctctttgattgaattgaaagatgtttgttaaggcatgga                          >  2:359954‑M1/1‑25 (MQ=255)
                                                                                                                      tGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatgga                          <  2:103550‑M1/143‑119 (MQ=255)
                                                                                                                       gCCTTTGGTAGAGTAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggat                         <  1:967110‑M1/143‑120 (MQ=255)
                                                                                                                          tttGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcattttactactgtaactgtagtcagaagagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgca                      >  1:236044‑M1/1‑21 (MQ=255)
                                                                                                                          tttGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgca                      >  2:794131‑M1/1‑21 (MQ=255)
                                                                                                                           ttGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgcaa                     <  2:601379‑M1/143‑124 (MQ=255)
                                                                                                                           ttGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgcaa                     >  1:811656‑M1/1‑20 (MQ=255)
                                                                                                                             ggTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagctaatctctatttgattgaattgaaagatgtttgttaaggcatggatgcaagc                   <  2:373941‑M1/143‑126 (MQ=255)
                                                                                                                               tAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgcaagcta                 <  2:778553‑M1/143‑128 (MQ=255)
                                                                                                                               tAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgttggttaaggcatggatgcaagcta                 >  2:405915‑M1/1‑16 (MQ=255)
                                                                                                                                  agGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgcaagctatag              >  2:665841‑M1/1‑13 (MQ=255)
                                                                                                                                       aGTGCTAAataataatcaattgttaaatgattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgcaagctatagattct         <  1:796409‑M1/143‑136 (MQ=255)
                                                                                                                                         tGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgcaagctatagattctga       >  2:544557‑M1/1‑6 (MQ=255)
                                                                                                                                             aaataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgcaagctatagattctgatacg   <  1:559580‑M1/143‑142 (MQ=255)
                                                                                                                                             aaataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaagctctatttgattgaattgaaagatgtttgttaaggcatggatgcaagctatagattctgatacg   <  1:247463‑M1/143‑142 (MQ=255)
                                                                                                                                              aataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgccagctatagattctgatacgg  >  2:197128‑M1/1‑1 (MQ=255)
                                                                                                                                              |                                                                                                                                              
AAATTACAGTTAGTTATAAGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTT  >  NC_000913/1299356‑1299640

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.