New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 12994980 (0.000)80 (1.280) 67/276 0.0 100% intergenic (+253/‑1684) ychE/oppA UPF0056 family inner membrane protein/oligopeptide ABC transporter periplasmic binding protein
?NC_000913 1300698 = 0 (0.000)intergenic (+1453/‑484) ychE/oppA UPF0056 family inner membrane protein/oligopeptide ABC transporter periplasmic binding protein

TAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAGATTCTGATACGGT  >  NC_000913/1300558‑1300840
                                                                                                                                            |                                                                                                                                              
tttcagtttgttatattgatttccttaactgcttctcctcaccttcatgttattttcgccatatcataatcctgggctcgctgaagaataattgaaatgatattattaattccactgcctttgctagaggaaagtgctaaata                                                                                                                                              <  1:823608‑M2/3‑1 (MQ=255)
   cagttagttataaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaataata                                                                                                                                           <  1:613742‑M2/6‑1 (MQ=255)
         gttataaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAAt                                                                                                                                     <  2:274816‑M2/12‑1 (MQ=255)
          ttagaaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAAtt                                                                                                                                    <  1:26224‑M2/13‑1 (MQ=255)
           tataaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTg                                                                                                                                   >  2:369128‑M2/130‑143 (MQ=255)
             taaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattctactgcctttggtagaggaaagtgctaattaatcactcattgtt                                                                                                                                 >  1:1015138‑M2/128‑132 (MQ=255)
             taaggatttccttaactgcttctcctcaccatcatgttattttagccacatcataatcctgggcttggtgaagaataattgaaatgatattattaattccactgccgttggtagaggaaagtgctaaATAATAATCAATTGtt                                                                                                                                 >  2:196463‑M2/128‑143 (MQ=255)
               aggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgtctttggtagaggaaagtgctaaATAATAATCAATTGTTaa                                                                                                                               <  2:543311‑M2/18‑1 (MQ=255)
                ggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTaaa                                                                                                                              <  2:552811‑M2/19‑1 (MQ=255)
                ggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctggccttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGttaca                                                                                                                              >  1:120834‑M2/125‑141 (MQ=255)
                ggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataagcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTaaa                                                                                                                              <  2:1042579‑M2/19‑1 (MQ=255)
                 gatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTCAat                                                                                                                             >  1:282816‑M2/124‑143 (MQ=255)
                 gatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAat                                                                                                                             >  2:779807‑M2/124‑143 (MQ=255)
                     tccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAattatt                                                                                                                         >  2:325003‑M2/120‑143 (MQ=255)
                     tccttaactgcttctcctcaccatcatgttattttcgccacatcataacccttggcttgctgaagaataattgaactgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAattatt                                                                                                                         <  2:827120‑M2/24‑1 (MQ=255)
                      ccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATtg                                                                                                                        >  2:1067350‑M2/119‑143 (MQ=255)
                       cgtgactgcttctcctcgccatcgtgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATtgt                                                                                                                       <  1:511400‑M2/26‑1 (MQ=255)
                        ttaactgcttctcctcaccatcctgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATggtg                                                                                                                      >  1:564841‑M2/117‑143 (MQ=255)
                        ttaactgcttctcctcaccatcatgttattttcgtcacatcctatttctgggcttgctgaagcataattgacctgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATtatg                                                                                                                      >  1:152852‑M2/117‑143 (MQ=255)
                        ttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTCTtgtg                                                                                                                      >  2:559580‑M2/117‑143 (MQ=255)
                            ctgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATACTAATCAATTGTTAAATTATTGTGCAtt                                                                                                                  >  1:381351‑M2/113‑143 (MQ=255)
                             tgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCAttt                                                                                                                 >  1:520903‑M2/112‑143 (MQ=255)
                             tgcttctcctcaccatcatgttattttcgccacatcataatcctgggcgtgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCAttt                                                                                                                 <  2:813303‑M2/32‑1 (MQ=255)
                               cttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagactaattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCa                                                                                                               >  2:819042‑M2/110‑143 (MQ=255)
                                 tctcctcaccatcatcttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCACTCGTTAAATTATTGTGCATTTCact                                                                                                             >  1:944895‑M2/108‑143 (MQ=255)
                                   tcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATGTCactac                                                                                                           >  2:467294‑M2/106‑143 (MQ=255)
                                      tcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATACTAATCAATCGTTAAATTATTGTGCATTTCACTACTgg                                                                                                        >  1:228674‑M2/103‑143 (MQ=255)
                                        accatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATCGTTAAATTATTGTGCATTTCACTACTGTaa                                                                                                      >  1:992745‑M2/101‑143 (MQ=255)
                                          catcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACt                                                                                                    >  2:274586‑M2/99‑143 (MQ=255)
                                          catcatggtattttcgccacatcataatcctgggcgtgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACt                                                                                                    <  2:720319‑M2/45‑1 (MQ=255)
                                             cacgttattttcgtcacatcataatcctgggcgctgttagtaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTa                                                                                                 <  1:488995‑M2/48‑1 (MQ=255)
                                               tgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAAt                                                                                               >  1:804199‑M2/94‑143 (MQ=255)
                                                gttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATc                                                                                              >  1:784853‑M2/93‑143 (MQ=255)
                                                 ttattttcgccacatcataatcttgggcttgatgaagaataattgaaatgatattattaattctactgcgtttggtagaggaaagtgataaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTaataa                                                                                             >  1:318530‑M2/92‑141 (MQ=255)
                                                 ttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCa                                                                                             <  2:823325‑M2/52‑1 (MQ=255)
                                                 gtattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggaagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCa                                                                                             >  2:133102‑M2/92‑143 (MQ=255)
                                                    ttttcgccacatcagaatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCGTTTCACTACTGGAACTGTAAGCAGaa                                                                                          >  2:676237‑M2/89‑143 (MQ=255)
                                                     tttcgccacgtcatagtgctggtcttgcctaagaataagtgaaatgatattattaattccactgcctgtggtagagggaagtgctaaATAATAATCAAGTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGaaa                                                                                         <  1:91637‑M2/56‑1 (MQ=255)
                                                     tttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGaaa                                                                                         <  2:616312‑M2/56‑1 (MQ=255)
                                                      ttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGaaaa                                                                                        >  2:1022814‑M2/87‑143 (MQ=255)
                                                       tcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAg                                                                                       >  2:631082‑M2/86‑143 (MQ=255)
                                                          ccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATa                                                                                    <  1:608384‑M2/61‑1 (MQ=255)
                                                          ccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATa                                                                                    <  2:838039‑M2/61‑1 (MQ=255)
                                                             catcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCGTTTCACTACTGGAACTGTAATCAGAAAAGATAGAc                                                                                 >  1:303103‑M2/80‑143 (MQ=255)
                                                              atcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtcgaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCAATACTGAAACTGTAATCAGAAAAGAAAGACa                                                                                >  1:122307‑M2/79‑143 (MQ=255)
                                                              atcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACa                                                                                >  1:928413‑M2/79‑143 (MQ=255)
                                                               tcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACAt                                                                               <  2:236972‑M2/66‑1 (MQ=255)
                                                                    atcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTa                                                                          <  2:557862‑M2/71‑1 (MQ=255)
                                                                     tcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAg                                                                         <  1:920232‑M2/72‑1 (MQ=255)
                                                                       ctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGACCTGTAATCAGTACAGGAATACATGCTTAGcc                                                                       >  1:173991‑M2/70‑143 (MQ=255)
                                                                           gcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAAtc                                                                   >  2:834523‑M2/66‑143 (MQ=255)
                                                                             ttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAACAGATAGACATGCTTAGCCCAtctc                                                                 >  1:212629‑M2/64‑143 (MQ=255)
                                                                                ctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTAt                                                              <  2:85726‑M2/83‑1 (MQ=255)
                                                                                    agaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATttga                                                          >  1:750494‑M2/57‑143 (MQ=255)
                                                                                      aatgggtgaaaggatagtattaattcccctgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATttgatt                                                        <  1:221357‑M2/89‑1 (MQ=255)
                                                                                               aatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGaaa                                               <  2:1027364‑M2/98‑1 (MQ=255)
                                                                                                  gatattattaattccactgcctttggtatacgcacgtccgaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGAt                                            <  1:600348‑M2/101‑1 (MQ=255)
                                                                                                   atattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGAtg                                           <  2:855732‑M2/102‑1 (MQ=255)
                                                                                                     agttgtaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAGATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACAGGCTGAGCCAATCTCTATTTGATTGAATTGAAAGAtgtt                                         <  1:849452‑M2/104‑1 (MQ=255)
                                                                                                      ttattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTCTTTGATTGAATTGAAAGAtgttt                                        >  2:545361‑M2/39‑143 (MQ=255)
                                                                                                      ttattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGAtgttt                                        >  2:852502‑M2/39‑143 (MQ=255)
                                                                                                      ttattaattccactgcctttggtagaggaaagggctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGAtgttt                                        >  2:826024‑M2/39‑143 (MQ=255)
                                                                                                        gttgtttctactgccttcgggagaggcaagttctacATAATCAGCAATTGTTTAATTACTGTGCATTTCACTACTTGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGAtgtttgt                                      <  2:245542‑M2/107‑1 (MQ=255)
                                                                                                        attaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTACCCAATCTATATTTGATTGAATTGAAAgatgttttt                                      >  1:90684‑M2/37‑141 (MQ=255)
                                                                                                           aattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTaa                                   <  1:819042‑M2/110‑1 (MQ=255)
                                                                                                                 actgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCCCTTTTTGGTTGAATTGAAAGATGTTAGTTAAAGCATg                             >  1:479617‑M2/28‑143 (MQ=255)
                                                                                                                 actgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGAAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATg                             >  1:1061593‑M2/28‑143 (MQ=255)
                                                                                                                   tgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACGTGGTTGGCGAATCTCTCTTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGa                           >  2:359954‑M2/26‑143 (MQ=255)
                                                                                                                   tgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGa                           <  2:103550‑M2/118‑1 (MQ=255)
                                                                                                                    gcctttggtagagtaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGAt                          <  1:967110‑M2/119‑1 (MQ=255)
                                                                                                                       tttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTTACTACTGTAACTGTAGTCAGAAGAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCa                       >  1:236044‑M2/22‑143 (MQ=255)
                                                                                                                       tttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCa                       >  2:794131‑M2/22‑143 (MQ=255)
                                                                                                                        ttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCaa                      <  2:601379‑M2/123‑1 (MQ=255)
                                                                                                                        ttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCaa                      >  1:811656‑M2/21‑143 (MQ=255)
                                                                                                                          ggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCTAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGc                    <  2:373941‑M2/125‑1 (MQ=255)
                                                                                                                            tagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCta                  <  2:778553‑M2/127‑1 (MQ=255)
                                                                                                                            tagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTGGTTAAGGCATGGATGCAAGCta                  >  2:405915‑M2/17‑143 (MQ=255)
                                                                                                                               aggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAg               >  2:665841‑M2/14‑143 (MQ=255)
                                                                                                                                    agtgctaaATAATAATCAATTGTTAAATGATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAGATTCt          <  1:796409‑M2/135‑1 (MQ=255)
                                                                                                                                      tgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAGATTCTGa        >  2:544557‑M2/7‑143 (MQ=255)
                                                                                                                                          aaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAGATTCTGATACg    <  1:559580‑M2/141‑1 (MQ=255)
                                                                                                                                          aaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAAGCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAGATTCTGATACg    <  1:247463‑M2/141‑1 (MQ=255)
                                                                                                                                           aATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCCAGCTATAGATTCTGATACgg   >  2:197128‑M2/2‑143 (MQ=255)
                                                                                                                                            ataataatCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTTATTGAATTGAAAGATGTTTGTTAAGGCATGGATGTAAGCTATAGATTCTGATACGGt  <  2:942747/143‑1 (MQ=255)
                                                                                                                                            |                                                                                                                                              
TAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAGATTCTGATACGGT  >  NC_000913/1300558‑1300840

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.