| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1589993 | 3 (0.060) | 67 (1.270) | 57/284 | 0.0 | 95.7% | pseudogene (87/1227 nt) | ydeT | pseudogene, putative outer membrane protein |
| ? | NC_000913 | 4498181 = | NA (NA) | intergenic (+240/‑92) | intB/insC1 | pseudogene, integrase homology,IS, phage, Tn, Phage‑related functions and prophages, KpLE2 phage‑like element, P4‑like integrase/IS2 repressor TnpA | |||||
ACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1589852‑1589993‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACA > NC_000913/4498181‑4498319 ACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAG > 2:438546/1‑143 tgtAAAATGGCGTATCGTTACTCCCAAGCTGCTGAGAGATGTTTATTTGTTCCTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTA < 1:769807/140‑1 AAAAATGTCGTACCGTAATTTCCAAGCTGCTGGGAGAGGCGTATTTGTTCCTGACCACGCTTACGGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAGGTAGA > 1:605508/1‑143 aaacgcCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCACGCTTACTGTAGAACAGATTAAAATATTCAATGAAGGGTGTCTTCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACT < 2:713178/137‑1 AATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTG < 2:310418/143‑1 ATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGAGTGG > 2:227609/1‑143 TGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTTGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGC < 2:280514/143‑1 GTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGACGCTTTACGGTGTAAGTAAACTGCCC > 1:699525/1‑143 CGTGCCGTAATTTGCCAGCTGCTGAGAGATGCTTATTGGTGCCTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATGAATTGTGTCTGCTCCTTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCC < 1:599943/143‑1 TACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCT > 1:260635/1‑143 TACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCT > 2:572116/1‑143 TACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCACGCTTACTCTAGAACCGATTAAAATAATCAATAACTTGTGTCTGCTCATTGGTGTCTCCGGTAGGCGGCTTGACGGGGCAAGTACCCTGTCCCCCT > 2:810522/1‑143 TAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCTGAATC < 2:395948/143‑1 actgCCAATCTGCTGAGAGATGCTTATGTGTTCCTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAGATTGTGTCTGCTCATTGGTGGCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCTGAATCTC < 1:98038/139‑1 CCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCTGAATCTCCAGA > 1:278414/1‑143 CTGAGAGATGCTTATTTGTTCCTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAAT < 2:732959/143‑1 AGATGCTTATTTGTTCCTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCAC < 2:466939/143‑1 TGCTTATTTGTTCCTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCCCTca > 1:469873/1‑141 TTTGTTCCTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCTGAATCTCCGGACAACCAAGATCACTTAAATAAG > 1:76479/1‑143 TCCTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATA > 1:335916/1‑143 CCTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAG < 2:218604/143‑1 CTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGT > 1:756281/1‑143 TGACCGCGCTTACTGTAGAACAGATTAAGATAATCAATAAATTGTGTGTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTC < 1:128260/143‑1 TGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCTGAATCTCCAGCCAACCAATAGCCCTTAAATAAGTGATAATC > 2:810514/1‑143 TGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTC > 2:214774/1‑143 ACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTT < 1:281778/143‑1 CCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAATCTTA > 2:833531/1‑143 gcgTACTGTAGAACAGATTATAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTATACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTATTTAAGTGATAttggttgtct < 1:436567/140‑11 TTACTGAAGAACAGATTAAAATAATAAATCAATTGTGTCTGCTCATTGGTGTCCCCGGTAGGGGGCTTGACGCTGTAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTA < 1:328579/143‑1 TACTGTAGAACAGATTAAAATAATGAATAAATTGTGTCTGCTCATTGGTGACTCCGGTAGGAGGCTTGACGGTGGAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTCAAATAAGTGATAGTCTTAATCCTAG > 2:578435/1‑143 TACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCTGACTCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACCAG > 2:862905/1‑143 TACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG < 1:274584/143‑1 tgcAGACCAGATTAAAACAAGCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTT < 2:802541/140‑1 TGTAGAACAGATTAAAATAATCAATACATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTACGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACGTAAGTAAGTGATAGTCTTACTACTAGTTT > 1:836917/1‑143 TGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGATT > 1:447274/1‑143 GTAGAACAGATTAGAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTT < 1:733402/143‑1 GTACAACAGATTACAATAATCAATAAATTGTGTGTGCTCATTTGTGTCTGCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGACCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTT < 1:888044/143‑1 TAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTT > 2:646089/1‑143 AGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTA < 2:787454/143‑1 AGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTA < 2:783586/143‑1 AACAGATTACAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGA < 1:738538/143‑1 ACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATCATAGTTTTTAGAC > 1:133730/1‑143 AGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTA < 1:71800/143‑1 ATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGT > 2:450945/1‑143 AAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCTGAATCTCCAGACAGCCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATT > 2:520461/1‑143 gAATCGATAAATTGTGGCTGCTCGTTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGAtcggaagagcgt < 1:636656/142‑13 AATCAATAAATTGTGTCTGCTCATTGGTGCCTCTTGTAGGTGGCTTGACGGTGTAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAG < 2:708273/143‑1 ATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGA < 2:278414/143‑1 TCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAA < 2:159473/143‑1 CAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAAC < 2:756281/143‑1 ATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGCTGA > 2:700089/1‑143 gggGTCGGCTCAGTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATT < 2:149434/140‑1 CTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTT > 2:828634/1‑143 gggccgCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATCAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCG < 2:350945/137‑1 GTGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACATAAATAAGTGATAGTCTGAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGAGGTCGTAGAGCCG > 1:263285/1‑143 TGTCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGG < 2:824257/143‑1 gcCTCCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCTGAAACTCCAGACAACCAATATCACTTAAAGAAGTGATAGTCTTAATTCTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGA < 2:326605/141‑1 gacaccaGTAGGAGGAATGACGGTGTAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGA < 2:279878/136‑1 CCGGTAGGAGGCTTGACGGTGTAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAA < 1:612233/143‑1 CGGTAGGAGTCTTGACGGTGTAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTTATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAAC < 1:479910/143‑1 GAGGCTTGACGGTGTAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGAC > 1:12091/1‑143 TTGACGGTGTAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTTTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGGGAAACGCAGACGACGT > 2:317084/1‑143 tccgaTGTAAGTAGACTGTCCCCGTTTATCCCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGACCAGATGATTGATGTCTTAGGGCCTGAGAAACGCAGACGGCGTAC < 1:324968/138‑1 GACGGTGTAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACCTAACTCAGTGATAGTCTTAATACTAGTCTTTAGACTACTCATAGAAATACAGATGACTGATGTCTTAGGGCCGGACAAACGCAGACAGCGTAC > 1:546103/1‑143 TGTAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACAC > 1:26890/1‑143 TGTAAGTAGACTGGCACACTGAATCTCCAGACAAGCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACAC < 2:634173/143‑1 GTAAGTAGACTGGCCCCCTGAATCTCCAGACAACCAACATCACGTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCTGGAGAAACGCAGACGGCGTACCACACA < 1:622223/143‑1 ACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1589852‑1589993‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACA > NC_000913/4498181‑4498319 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |