| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1589993 | 3 (0.060) | 67 (1.270) | 57/284 | 0.0 | 95.7% | pseudogene (87/1227 nt) | ydeT | pseudogene, putative outer membrane protein |
| ? | NC_000913 | 4498181 = | NA (NA) | intergenic (+240/‑92) | intB/insC1 | pseudogene, integrase homology,IS, phage, Tn, Phage‑related functions and prophages, KpLE2 phage‑like element, P4‑like integrase/IS2 repressor TnpA | |||||
Only 100 of 124 total aligned reads displayed.
CACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAACCACTCATTCGACTGTAGGCACTGTCGGATAAGTTATAAAAACCTTGCGTAGAATAGCGATATCCTGCGACCTGGATATTGGTTCCACAACAAGTTTATTGCTGCACTTGTTGAAGAGAGTATTTGCAAAAACATTTTATG > NC_000913/1589851‑1590134 | ttgcagaggcgttcgagcattataacgaatggcagccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTaa > 2:720162‑M1/140‑143 (MQ=255) aCTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAg > 2:438546‑M1/1‑142 (MQ=255) tgtaaaatggCGTATCGTTACTCCCAAGCTGCTGAGAGATGTTTATTTGTTCCTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAgta < 1:769807‑M1/140‑4 (MQ=255) aggggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTAACCAc > 1:633695‑M1/136‑143 (MQ=255) aaTGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAgtagactg < 2:310418‑M1/143‑9 (MQ=255) aTGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAgtagagtgg > 2:227609‑M1/1‑134 (MQ=255) tGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTTGTGTCTCCGGTAGGAGGCTTGACGGTGTAAgtagactggc < 2:280514‑M1/143‑11 (MQ=255) ttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTAACCACTCATTCg < 2:794448‑M1/15‑1 (MQ=255) gTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGACGCTTTACGGTGTAAgtaaactgccc > 1:699525‑M1/1‑132 (MQ=255) tcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTAACCACTCATTCGa > 2:771941‑M1/128‑143 (MQ=255) cGTGCCGTAATTTGCCAGCTGCTGAGAGATGCTTATTGGTGCCTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATGAATTGTGTCTGCTCCTTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAgtagactggcccc < 1:599943‑M1/143‑14 (MQ=255) gagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggtgaagtgataacagatgtgtggaaatataggggcgaatccaGTAACCACTCATTCGACt < 2:339436‑M1/18‑1 (MQ=255) tACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAgtagactggccccct > 1:260635‑M1/1‑128 (MQ=255) tACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAgtagactggccccct > 2:572116‑M1/1‑128 (MQ=255) tACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCACGCTTACTCTAGAACCGATTAAAATAATCAATAACTTGTGTCTGCTCATTGGTGTCTCCGGTAGGCGGCTTGACGGGGCAAgtaccctgtccccct > 2:810522‑M1/1‑128 (MQ=255) tAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAgtagactggccccctgaatc < 2:395948‑M1/143‑21 (MQ=255) ataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTAACCACTCATTCGACTGTAGGCa > 2:328131‑M1/119‑143 (MQ=255) taacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgttatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTAACCGCTCATTCGACTGTAGGCAc < 2:473465‑M1/26‑1 (MQ=255) actgccaatcTGCTGAGAGATGCTTATGTGTTCCTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAGATTGTGTCTGCTCATTGGTGGCTCCGGTAGGAGGCTTGACGGTGTAAgtagactggccccctgaatctc < 1:98038‑M1/139‑23 (MQ=255) aacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaggtataggggcaaatccaGCAACCACTCATTCGACTGTAGGCACt < 1:838352‑M1/27‑1 (MQ=255) gcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcgagtccaGTAACCACTCATTCGACTGTAGGGACTGTCGGATa < 2:704919‑M1/35‑1 (MQ=255) cgtccgtctagggcgatgcgttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgtgttacgtgataacagatgtctggaaatataggggcaaatccaGTAACCACTCATTCGACTGTAGGCACTGTCGGATaa > 1:673837‑M1/108‑143 (MQ=255) catcctggtggtgcgctgggttatcgctctgcacgggaatatctgcggcagcgggcttgtaatgggttaagcgccaacagatgtctggaaatataggggcaaatccaGTAACCACTCATTCGACTGTAGGCACTGTCGGATaa > 1:688532‑M1/108‑143 (MQ=255) catccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTAACCACTCATTCGACTGTAGGCACTGTCGGATaa < 1:628591‑M1/36‑1 (MQ=255) catccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaagataggggcaaatccaGTAACCACTCATTCGACTGTAGGCACTGTCGgatca < 2:540675‑M1/36‑3 (MQ=255) atccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTAACCACTCATTCGACTGTAGGCACTGTCGGATAAg < 2:599005‑M1/37‑1 (MQ=255) tccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTAACCACTCATTCGACTGTAGGCACAGTCGGAGAAGt < 1:342363‑M1/38‑1 (MQ=255) ctgAGAGATGCTTATTTGTTCCTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAgtagactggccccctgaatctccagacaaccaat < 2:732959‑M1/143‑35 (MQ=255) atagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTAACCACTCATTCGACTGTAGGCACTGTCGGATAAGTTATaa > 2:749340‑M1/101‑143 (MQ=255) agaTGCTTATTTGTTCCTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAgtagactggccccctgaatctccagacaaccaatatcac < 2:466939‑M1/143‑40 (MQ=255) tGCTTATTTGTTCCTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAgtagactggccccctgaatctccagacaaccaatatccctca > 1:469873‑M1/1‑101 (MQ=255) gtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTAACCACTCATTCGACTGTAGGCACTGTCGGATAAGTTATaaaaa > 1:505185‑M1/98‑143 (MQ=255) gctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagttataacagatgtctggaaatataggggcaaatccaGTAACCACTCATTCGACTGTAGGCACTGTCGGCTAAGTTATAACAACCtt < 1:343471‑M1/50‑1 (MQ=255) tcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggacatataggggcaaatccaGTAACCACTCATTCGACTGTAAGCACTGTCGGATAAACTCTAAAAACCGTACGTAGAAt < 1:214739‑M1/59‑1 (MQ=255) cTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAgtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagt > 1:756281‑M1/1‑88 (MQ=255) tGACCGCGCTTACTGTAGAACAGATTAAGATAATCAATAAATTGTGTGTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAgtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtc < 1:128260‑M1/143‑57 (MQ=255) tGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAgtagactggccccctgaatctccagccaaccaatagcccttaaataagtgataatc > 2:810514‑M1/1‑87 (MQ=255) tGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAgtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtc > 2:214774‑M1/1‑87 (MQ=255) aCCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAgtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtctt < 1:281778‑M1/143‑59 (MQ=255) ccACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAgtagactggccccctgaatctccagacaaccaatatcacttaaataagtgataatctta > 2:833531‑M1/1‑84 (MQ=255) gcgtactGTAGAACAGATTATAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAgtatactggccccctgaatctccagacaaccaatatcacttatttaagtgatattggttgtct < 1:436567‑M1/140‑64 (MQ=255) ttACTGAAGAACAGATTAAAATAATAAATCAATTGTGTCTGCTCATTGGTGTCCCCGGTAGGGGGCTTGACGCTGTAAgtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatacta < 1:328579‑M1/143‑66 (MQ=255) tACTGTAGAACAGATTAAAATAATGAATAAATTGTGTCTGCTCATTGGTGACTCCGGTAGGAGGCTTGACGGTGGAAgtagactggccccctgaatctccagacaaccaatatcactcaaataagtgatagtcttaatcctag > 2:578435‑M1/1‑77 (MQ=255) tACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAgtagactggccccctgactctccagacaaccaatatcacttaaataagtgatagtcttaataccag > 2:862905‑M1/1‑77 (MQ=255) tACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAgtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactag < 1:274584‑M1/143‑67 (MQ=255) gaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTAACCACTCATTCGACTGTAGGCACTGTCGGATAAGTTATAAAAACCTTGCGTAGAATAGCGATATCCTGc < 2:842562‑M1/72‑1 (MQ=255) tGTAGAACAGATTAAAATAATCAATACATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTACgtagactggccccctgaatctccagacaaccaatatcacgtaagtaagtgatagtcttactactagttt > 1:836917‑M1/1‑74 (MQ=255) gTACAACAGATTACAATAATCAATAAATTGTGTGTGCTCATTTGTGTCTGCGGTAGGAGGCTTGACGGTGTAAgtagactggacccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttt < 1:888044‑M1/143‑71 (MQ=255) tAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAgtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagttttt > 2:646089‑M1/1‑72 (MQ=255) aGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAgtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagttttta < 2:787454‑M1/143‑73 (MQ=255) aGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAgtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagttttta < 2:783586‑M1/143‑73 (MQ=255) ctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTAACCACTCATTCGACTGTAGGCACTGTCGGATAAGTTATAAAAACCTTGCGTAGAATAGCGATATCCTGCGACCTg < 1:325617‑M1/78‑1 (MQ=255) aaCAGATTACAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAgtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttaga < 1:738538‑M1/143‑75 (MQ=255) aCAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAgtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatcatagtttttagac > 1:133730‑M1/1‑68 (MQ=255) gcggcagcgggcgtgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTAACCACTCATTCGACTGTAGGCACTGTCGGATAAGTTATAAAAACCTTGCGTAGAATAGCGATATCCTGCGACCTGGa > 2:805606‑M1/64‑143 (MQ=255) cggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTAACCACTCATTCGACTGTAGGCACTGTCGGATAAGTTATAAAAACCTTGCGTAGAATAGCGATATCCTGCGACCTGGat < 2:313923‑M1/81‑1 (MQ=255) aGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAgtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagacta < 1:71800‑M1/143‑78 (MQ=255) cagcgggcttgtaatgggttaagtgataacagatggctggaaatatgggggcaaatcaaGTAACCACTCATTCGACTGTAGGAACTGTCGGATAAGTTATAAAAACCTTGCGTAGAATAGCGATATCCTGCGACCTGGATAtt > 2:492398‑M1/60‑143 (MQ=255) agcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTAACCACTCATTCGACTGTAGGCACTGTCGGAGAAGTTATAAAAACCTTGCGTCGGGCAGCGAAATCCTGCGACCTGGATATTg < 1:397654‑M1/85‑1 (MQ=255) agcgggcttgtaatgggttaagtgataaaagatgtctggaaatataggggcaaatccaGTAACCACTCATTCGACTGTAGGCACTGACGGATAAGTTATAAAAACCTTGCGTAGAATAGCGATATCCTGCGACCTggatatgg < 2:255114‑M1/85‑3 (MQ=255) gcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTAACCACTCATTCGACTGTAGGCACTGTCGGATAAGTTATAAAAACCTTGCGTAGAATAGCGATATCCTGCGACCTGGATATTgg > 1:79144‑M1/58‑143 (MQ=255) aaaTAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAgtagactggccccctgaatctccagacagccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcatt > 2:520461‑M1/1‑60 (MQ=255) gggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTAACCACTCATTCGACTGTAGGCACTGTCGGATAAGTTATAAAAACCTTGCGTAGAATAGCGATATCCTGCGCCCTGGATATTGGtt < 1:578306‑M1/88‑1 (MQ=255) gggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTAACCACTCATTCGACTGTAGGCACTGTCGGATAAGTTATAAAAACCTTGCGTAGAATAGCGATATCCTGCGACCTGGATATTGGtt < 2:240665‑M1/88‑1 (MQ=255) ggcttgtaatgggttaagggataacagatgtctggaaatataggggcaaatccaGTAACCACTCATTCGACTGTAGGCACTGTCGGATAAGTTATAAAAACCTTGCGTAGAATAGCGATATCCTGCGACCTGGATATTGGTTc > 2:527045‑M1/55‑143 (MQ=255) gaatcGATAAATTGTGGCTGCTCGTTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAgtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagatcggaagagcgt < 1:636656‑M1/142‑87 (MQ=255) attataatgtgttaagtgataactggtgtctggaaatataggggcaaatccaGTAACCACTCATTCGACTGTAGGCACTGTCGGATATGTTATAAAAACCTTGCGTAGAATAGCGATATCCTGCGACCTGGATATTGGTTCca > 1:587675‑M1/53‑143 (MQ=255) aatCAATAAATTGTGTCTGCTCATTGGTGCCTCTTGTAGGTGGCTTGACGGTGTAAgtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggag < 2:708273‑M1/143‑88 (MQ=255) atCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAgtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggaga < 2:278414‑M1/143‑89 (MQ=255) tCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAgtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaa < 2:159473‑M1/143‑90 (MQ=255) gtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTAACCACTCATTCGACTGTAGGCACTGTCGGATAAGTTATAAAAACCTTGCGTAGAATAGCGATATCCTGCGACCTGGATATTGGTTCCacaa > 2:515971‑M1/50‑143 (MQ=255) taatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTAACCACTCATGCGACTGTAGGCACTGTCGGATAAGTTATAAAAACCTTGCGTAGAATAGCGATATCCTGCGACCTGGATATTGGTTCCacaac > 2:408299‑M1/49‑143 (MQ=255) aTTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAgtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagctga > 2:700089‑M1/1‑47 (MQ=255) gttaagtgataacagatgtctggaaatataggggcaaatccaGTAACCACTCATTCGACTGTAGGCACTGTCGGATAAGTTATAAAAACCTTGCGTAGAATAGCGATATCCTGCGACCTGGATATTGGTTCCACAACAAGttt < 2:745545‑M1/101‑1 (MQ=255) ggggtcggCTCAGTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAAgtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgatt < 2:149434‑M1/140‑99 (MQ=255) agtgataacagatgtctggaaatataggggcaaatccaGTAACCACTCATTCGACTGTAGGCACTGTCGGATAAGTTATAAAAACCTTGCGTAGAATAGCGATATCCTGCGACCTGGATATTGGTTCCACAACAAGTTTATtg > 2:706129‑M1/39‑143 (MQ=255) cagatgtctggaaatataggggcaaatccaGTAACCACTCATTCGACTGTAGGCACTGTCGGATAAGTTATAAAAACCTTGCGTAGAATAGCGATATCCTGCGACCTGGATATTGGTTCCACAACAAGTTTATTGCTGCACtt < 1:764578‑M1/113‑1 (MQ=255) atgtctggaaatataggggcaaatccaGTAACCACTCATTCGACTGTAGGCACTGTCGGATAAGTTATAAAAACCTTGCGTAGAATAGCGATATCCTGCGACCTGGATATTGGTTCCACAACAAGTTTATTGCTGCACttgtt > 2:237414‑M1/28‑143 (MQ=255) gtgtCTCCGGTAGGAGGCTTGACGGTGTAAgtagactggccccctgaatctccagacaaccaatatcacataaataagtgatagtctgaatactagtttttagactagtcattggagaacagatgattgaggtcgtagagccg > 1:263285‑M1/1‑30 (MQ=255) gggccgccggtaggAGGCTTGACGGTGTAAgtagactggccccctgaatctccagacaaccaatatcacttaaatcagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccg < 2:350945‑M1/137‑114 (MQ=255) tgtCTCCGGTAGGAGGCTTGACGGTGTAAgtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccgg < 2:824257‑M1/143‑115 (MQ=255) gcctccgGTAGGAGGCTTGACGGTGTAAgtagactggccccctgaaactccagacaaccaatatcacttaaagaagtgatagtcttaattctagtttttagactagtcattggagaacagatgattgatgtcttagggccgga < 2:326605‑M1/141‑116 (MQ=255) tggaaatataggggcaaatccaGTAACCACTCATTCGACTGTAGGCACTGTCGGATAAGTTATAAAAACCTTGCGTAGAATAGCGATATCCTGCGACCTGGATATTGGTTCCACAACAAGTTTATTGCTGCACTTGTTGAaga < 1:899844‑M1/121‑1 (MQ=255) gaaatataggggcaaatccaGTAACCACTCATTCGACTGTAGGCACTGTCGGATAAGTTATAAAAACCTTGCGTAGAATAGCGATATCCTGCGACCTGGATATTGGTTCCTCAACAAGTTTATTGCTGCACTTGTTGAagaga > 1:478235‑M1/21‑143 (MQ=255) gaaatataggggcaaatccaGTAACCACTCATTCGACTGTAGGCACTGTCGGATAAGTTATAAAAACCTTGCGTAGAATAGCGATATCCTGCGACCTGGATATTGGTTCCACAACAAGTTTATTGCTGCACTTGTTGAagaga > 2:838352‑M1/21‑143 (MQ=255) ccGGTAGGAGGCTTGACGGTGTAAgtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaa < 1:612233‑M1/143‑120 (MQ=255) cGGTAGGAGTCTTGACGGTGTAAgtagactggccccctgaatctccagacaaccaatatcacttaaataagttatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaac < 1:479910‑M1/143‑121 (MQ=255) aaatataggggcaaatccaGTAACCACTCATTCGACTGTAGGCACTGTCGGATAAGTTATAAAAACCTTGCGTAGAATAGCGATATCCTGCGACCTGGATATTGGTTCCACAACAAGTTTATTGCTGCACTTGTTGAagagag < 2:472799‑M1/124‑1 (MQ=255) gaggCTTGACGGTGTAAgtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagac > 1:12091‑M1/1‑17 (MQ=255) gggcaaatccaGTAACCACTCATTCGACTGTAGGCACTGTCGGATAAGTTATAAAAACCTTGCGTAGAATAGCGATATCCTGCGACCTGGATATTGGTTCCACAACAAGTTTATTGCTGCACTTGTTGAAGAGAGTATttgta < 2:305338‑M1/132‑3 (MQ=255) caaatccaGTAACCACTCATTCGACCGTAGGCACTGTCGGATAAGTTATAAAAACCTTGCGTAGAATATCGTTATCCTGCGACCTGGATATTGGTTCAACAACAAGTTTATTGCTGCACTTGTTGAAGAGAGTATTTGCaaaa > 2:151758‑M1/9‑143 (MQ=255) tccgatgtaagtagactgtccccgtttatccccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaccagatgattgatgtcttagggcctgagaaacgcagacggcgtac < 1:324968‑M1/138‑134 (MQ=255) gACGGTGTAAgtagactggccccctgaatctccagacaaccaatatcacctaactcagtgatagtcttaatactagtctttagactactcatagaaatacagatgactgatgtcttagggccggacaaacgcagacagcgtac > 1:546103‑M1/1‑10 (MQ=255) aatcacgtAACCACGCATTCGACTGTAGGCACTGTCGGATAAGTTATAAAAAGCTGGCGTAGAATAGCGATATCCTGCGACCTGGATATTGGTGCCACAACAAGTTTATTGCTGCACTTGTTGAAGAGAGTATTTGCAAAAAc < 1:749943/137‑1 (MQ=255) caGTAACCACTCATTCGACTGTAGGCACTGTCGGATAAGTTATAAAAACCTTGCGTAGAATAGCGATATCCTGCGACCTGGATATTGGTTCCACAACAAGTTTATTGCTGCACTTGTTGAAGAGAGTATTTGCAAAAACAttt > 2:391621‑M1/3‑143 (MQ=255) tgtAAgtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacac > 1:26890‑M1/1‑5 (MQ=255) tgtAAgtagactggcacactgaatctccagacaagcaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacac < 2:634173‑M1/143‑139 (MQ=255) gtAAgtagactggccccctgaatctccagacaaccaacatcacgtaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggctggagaaacgcagacggcgtaccacaca < 1:622223‑M1/143‑140 (MQ=255) tAACCACTCATTCGACTGTAGGCACTGTCGGATCAGTTATAAAACCCTTGCGTAGAACGGCGATATCCGGCGACCTGGATATTGGTTCGACAACAAGTTTATTGCTGCACTTGTTGAGGAGAGTATTTGCAAGGACAttgggt > 2:109507/1‑139 (MQ=255) aaCCACTCATTCGACTGTATGCACTGTCGGATAAGTTATAAAAACCTTGCGTAGAATAGCGATATCCTGCGACCTGGATATTGGTTCCACAACAAGTTTATTGCTGCACTTGTTGAAGAGAGTATTTGCAAAAACATTTTATg < 1:202558/143‑1 (MQ=255) | CACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCTCATTGGTGTCTCCGGTAGGAGGCTTGACGGTGTAACCACTCATTCGACTGTAGGCACTGTCGGATAAGTTATAAAAACCTTGCGTAGAATAGCGATATCCTGCGACCTGGATATTGGTTCCACAACAAGTTTATTGCTGCACTTGTTGAAGAGAGTATTTGCAAAAACATTTTATG > NC_000913/1589851‑1590134 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |