New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3104380	55 (1.040)	3 (0.060)	3/268	7.9	5.5%	intergenic (+14/‑51)	yggX/mltC	oxidative damage protective factor for iron‑sulfur proteins/membrane‑bound lytic murein transglycosylase C
	?	NC_000913	= 3104385	52 (1.040)					intergenic (+19/‑46)	yggX/mltC	oxidative damage protective factor for iron‑sulfur proteins/membrane‑bound lytic murein transglycosylase C
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GATTAATGAAAAGAAACTCAACATGATGAATGCCGAGCACCGCAAGCTGCTTGAGCAGGAGATGGTCAACTTCCTGTTCGAGGGTAAAGAGGTGCATATCGAGGGCTATACGCCGGAAGATAAAAAATAAAAACAGTGCCGGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3104237‑3104380 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccggagGCGTGCTCCGGCACTGTTTTTATTTTTTATCTTCCGGCGTATAGCCCTCGATATGCACCTCTTTACCCTCGAACAGGAAGTTGACCATCTCCTGCTCAAGCAGCTTGCGGTGCTCGGCATTCATCATGTTGAGTTTC  <  NC_000913/3104385‑3104249                                                                                                                                                                                                                                                                                           GATTAATGAAAAGAAACTCAACATGATGAATGCCGAGCACCGCAAGCTGCTTGAGCAGGAGATGGTCAACTTCCTGTTCGAGGGTAAAGAGGTGCATATCGAGGGCTCTACGCCGGAAGCTAGAAACTAAAAACACTGCCGGA                                                                                                                                            >  1:358729/1‑143                               TGCCGAGCACCGCAAGCTGCTTGAGCAGGAGATGGTCAACTTCCTGTTCGAGGGTAAAGAGGTGCATATCGAGGGCTATACGCCGGAAGATAAAAAATAAAAACAGTGCCGGAGGCGTGCTCCGGCACTGTTTTTATTTTTTA                                                                                                              <  2:228337/143‑1                                                                                          AGGTGCATATCGAGGGCTATACGCCGGAAGATAAAAAATAAAAACAGTGCCGGAGGCGTGCTCCGGCACCGTTTTTATTTTTTATCTTCCGGCGTATAGCCCTCGATATGCCCCTCTTTACCCTCGAACCGGACGTTGACCAT                                                   >  1:173724/1‑143                                                                                                                                      agtgGCCGGAGGCGCGCTCCGGCACTGTTTTTATTTTTTATCGTCCGGCGTATAGCCCTCGATATGCACCTCTGTACCCGCGAACAGGAAGTTGACCATCTCCTGCTCAAGCAGCTTGCGGTGCTCGGCATTCATCATGTTGA       <  1:152002/139‑1                                                                                                                                      agGTGCGGGAGGCGTGCTCCGGCGCTGTTTTTATTTTTTATCTTCCGGCGTATAGCCCTCGATATGCACCTCTTTACCCTCGAACAGGAAGTTGACCATCTCCTGCTCAAGCAGCTTGCGGTGCTCGGCATCCATCATGTTGA       <  1:256094/141‑1                                                                                                                                           CCGGGGGCGTGCTCCGGCACTGTTTTTATTTTTTATCTTCCGGCGTATAGCCCTCGATATGCACCTCTTTACCCTCGAACAGGAAGTTGACCACCTCCTGCTCAAGCAGCTTGCGGTGCTCGGCATTCATCATGTTGAGTTTC  <  1:170047/143‑1                                                                                                                                                                                                                                                                                           GATTAATGAAAAGAAACTCAACATGATGAATGCCGAGCACCGCAAGCTGCTTGAGCAGGAGATGGTCAACTTCCTGTTCGAGGGTAAAGAGGTGCATATCGAGGGCTATACGCCGGAAGATAAAAAATAAAAACAGTGCCGGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3104237‑3104380 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccggagGCGTGCTCCGGCACTGTTTTTATTTTTTATCTTCCGGCGTATAGCCCTCGATATGCACCTCTTTACCCTCGAACAGGAAGTTGACCATCTCCTGCTCAAGCAGCTTGCGGTGCTCGGCATTCATCATGTTGAGTTTC  <  NC_000913/3104385‑3104249

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.