New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 347887754 (1.020)3 (0.060) 3/274 8.1 5.8% coding (1729/1806 nt) kefB potassium:proton antiporter
?NC_000913 = 3478891 46 (0.900)coding (1715/1806 nt) kefB potassium:proton antiporter
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GCCTGACAGGCCGGGCATTTTGCGCCCGCAATAAAACGTTTTCGGATTGCCATCTTTACCCTCTACTCAAATTCATCCCAGCCGTCCAGCTGGCGTCGTTCTTGTTGCATTTCACGCTGGAAAATCTCTTCCAGTTCGCGTCGGGCTTCCCTGGCGCGAGAAATTTGTACGGTATCGGCATGCATTGGGATGAGCTCTCGCAGCATCCGCATATCCAGGCGGCGAAAATGCAGTTGCGCTCGCTGTGCCTGATGCGGATGCATGCCAAGCGTGACC  >  NC_000913/3478738‑3479013
                                                                                                                                            |                                                                                                                                        
gcCTGACAGGCCGGGCATTTTGCGCCCGCAATAAAACGTTTTCGGATTGCCATCTTTACCCTCTACTCAAATTCATCCCAGCCGTCCAGCTGGCGTCGTTCTTGTTGCATTTCACGCTGGCAAATCTCTTCCAGTTCGCGTCg                                                                                                                                       >  1:703549/1‑143 (MQ=255)
gcCTGACAGGCCGGGCATTTTGCGCCCGCAATAAAACGTTTTCGGATTGCCATCTTTACCCTCTACTCAAATTCATCCCAGCCGTCCAGCTGGCGTCGTTCTTGTTGCATTTCACGCTGGAAAATCTCTTCCAGTTCGCGTCg                                                                                                                                       >  2:760227/1‑143 (MQ=255)
gcCTGACAGGCCGGGCATTTTGCGCCCGCAATAAAACGTTTTCGGATTGCCATCTTTACCCTCTACTCAAATTCATCCCAGCCGTCCAGCTGGCGTCGTTCTTGTTGCATTTCACGCTGGAAAATCTCTTCCAGTTCGCGTCg                                                                                                                                       <  2:749754/143‑1 (MQ=255)
 ccTGACAGGCCGGGCATTTTGCGCCCGCAATAAAACGTTTTCGGATTGCCATCTTTACCCTCTACTCAAATTCATCCCAGCCGTCCAGCTGGCGTCGTTCTTGTTGCATTTCACGCTGGAAAATCTCTTCCAGTTCGCGTCgg                                                                                                                                      <  2:692632/143‑1 (MQ=255)
  cTGACAGGCCGGGCATTTTGCGCCCGCAATAAAACGTTTTCGGATTGCCATCTTTACCCTCTACTCAAATTCATCCCAGCCGTCCAGCTGGCGTCGTTCTTGTTGCATTTCACGCTGGAAAATCTCTTCCAGTTCGCGTCggg                                                                                                                                     >  2:733189/1‑143 (MQ=255)
       acgCCGGGCATTTTGCGACCGCAATAAAACGTTTTCGGATTGCCATCTTTACCCTCTACTCAAATTCATCCCAGCCGTCCAGCTGGCGTCGTTCTTGTTGCATTTCACGCTGGAAAATCTCTTCCAGTTCGCGTCGGGCTTcc                                                                                                                                <  1:156817/141‑1 (MQ=255)
        ggCCGGGCATTTTGCGCCCGCAATAAAACGTTTTCGGATTGCCATCTTTACCCTCTACTCAAATTCATCCCAGCCGTCCAGCTGGCGTCGTTCTTGTTGCATTTCACGCTGGAAAATCTCTTCCCGTTCGCGTCGGGCTTccc                                                                                                                               >  1:4922/1‑143 (MQ=255)
              gCATTTTGCGCCCGCAATAAAACGTTTTCGGATTGCCATCTTTACCCTCTACTCAAATTCATCCCAGCCGTCCAGCTGGCGTCGTTCTTGTTGCATTTCCCGCTGGAAAATGTCTTCCAGTTCGCGTCTGGCTTCCCTGgcgc                                                                                                                         >  1:304503/1‑143 (MQ=255)
                atgttGCGCCCGCAATAAAACGTTTTCGGATTGCCATCGTTACCCGCTACTCAAATTCATCCCAGCCGGCCAGCTGGCGTCGTTCTTGTTGCATTTCACGCTGGAAAATCTCTTCCAGTTCGCGTCGGGCTTCCCTGGCGCga                                                                                                                       <  1:491415/140‑1 (MQ=255)
                aTTTTGCGCCCGCAATAACACGTTTTCGGATTGCCATCCTTACCCTCTACTCAAATTCATCCCAGCCGTCCAGCTGGCGTCGTTCTTGTTGCATTTCACGCTGGAAAATCTCTTCCAGTTCGCGTCGGGCTTCCCTGGCGCga                                                                                                                       <  1:629412/143‑1 (MQ=255)
                         ccGCAATAAAACGTTTTCGGATTGCCATCTTTACCCTCTACTCAAATTCATCCCAGCCGTCCAGCTGGCGTCGTTCTTGTTGCATTTCACGCTGGAAAATCTCTTCCAGTTCGCGTCGGGCTTCCCTGGCGCGAGAAATTTGt                                                                                                              >  2:641164/1‑143 (MQ=255)
                         ccGCAATAAAACGTTTTCGGATTGCCATCTTTACCCTCTACTCAAATTCATCCCAGCCGTCCAGCTGGCGTCGTTCTTGTTGCATTTCACGCTGGAAAATCTCTTCCAGTTCGCGTCGGGCTTCCCTGGCGCGAGAAATTTGt                                                                                                              >  2:642824/1‑143 (MQ=255)
                               tagagcGTTTTCGGAGTGCTAGCTTTGCCCTCTTCTCAGATGCATCCCAGCCGTCCAGCTGGCGTCGTTCTGGTTGCATTTGACGCTGGAAAATCTCTTCCAGTTCGCGTCGGGCTTCCCTGGCGCGAGAAATTTGTACGGTa                                                                                                        <  1:510807/138‑1 (MQ=255)
                                  aaccagttCGGATTGCCATCTTCACCCTCTACGCAAATGCAGCCCAGCCGCCCAGCTGGCGTCGTTCTTGTTGCATTTCACGCTGGAAAATCTCGTCCAGTTCGCGTCGGGCTTCCCTGGCGCGAGAAATTTGTACGGTATCg                                                                                                     <  2:439675/137‑1 (MQ=255)
                                      tgttCGGCTTGCCCTCTTTACCCTCTACTAACTAACAGTGCGTCCGTCCAGCTGGCGTCGTTCTTGTTGCATTTCACGCTGGAAAATCTCTTCCAGTTCGCGTCGGGCTTCCCTGGCGCGAGAAATTTGTACGGTATCGgcat                                                                                                 <  1:883516/141‑1 (MQ=255)
                                        tttgtaTTGTCTTCTTTTTCCTCTTCTCAAATCCATCACAGCCGCCCAGACGGCGTCGTTCTTGTTGCATTTCACGCTGGAAAATCTCTTCCAGTTCGCGTCGGGCTTCCCTGGCGCGAGAAATTTGTACGGTATCGgcatgc                                                                                               <  2:724940/138‑1 (MQ=255)
                                         tCGGATTGCCATCTTTACCCTCTACTCAAATTCATCCCAGCCGTCCAGCTGGCGTCGTTCTTGTTGCATTTCACGCTGGAAAATCTCTTCCAGTTCGCGTCGGGCTTCCCTGGCGCGGGGAATTTGTACGGTATCGgcatgca                                                                                              >  2:719283/1‑143 (MQ=255)
                                            gATTGCCATCTTTACCCTCTACTCAAATTCATCCCAGCCGTCCAGCTGGCGTCGTTCTTGTTGCATTTCACGCTGGAAAATCTCTTCCAGTTCGCGTCGGGCTTCCCTGGCGCGAGAAATTTGTACGGTATCGGCATGCATTg                                                                                           <  1:445565/143‑1 (MQ=255)
                                            gATTGCCATCTTTACCCTCTACTCAAATTCATCCCAGCCGTCCAGCTGGCGTCGTTCTTGTTGCATTTCACGCTGGAAAATCTCTTCCAGTTCGCGTCGGGCTTCCCTGGCGCGAGAAATTTGTACGGTATCGGCATGCATTg                                                                                           <  1:679171/143‑1 (MQ=255)
                                            gATTGCCATCTTGACCCTCTACTCAAATTCATCCCAGCCGTCCAGCTGGCGTCGTTCTTGTTGCATTTCCCGCTGGAAAATCTCTTCCAGTTCGCGTCGGGCTTCCCTGGCGCGAGAAATTTGTACGGTATCGGCATGCATTg                                                                                           <  2:533662/143‑1 (MQ=255)
                                               tGCCATCTTTACCCTCTACTCAAATTCATCCCAGCCGTCCAGCTGGCGTCGTTCTTGTTGCATTTCACGCTGGAAAATCTCTTCCAGTTCGCGTCGGGCTTCCCTGGCGCGAGAAATTTGTACGGTATCGGCATGCATTGGGa                                                                                        <  2:127153/143‑1 (MQ=255)
                                                gCCATCTTTACCCTCTACTCCAATTCACCCCAGCCGTCCGGCTGGCGTCGTTCTTGTTGCATTTCCCGCTGGAAAATCTCTTCCAGTTCGCGAAGGGCTTGCCTGGAGTGCGATCTTTGTACGGTATCGGCATGCATTGGGAt                                                                                       <  2:428964/143‑1 (MQ=255)
                                                 ccATCTTTACCCTCTACTCAAATTCATCCCAGCCGTCCAGCTGGCGTCGTTCTTGTTGCATTTCACGCTGGAAAATCTCTTCCAGTTCGCGTCGGGCTTCCCTGGCGCGAGCAATGTGCACGGTATCGGCATGCATTGGGCTg                                                                                      >  1:489530/1‑143 (MQ=255)
                                                   aTCTTTACCCTCTACTCAAATTCATCCCAGCCGTCCAGCTGGCGTCGTTCTTGTTGCATTTCACGCTGGAAAATCTCTTCCAGTTCGCGTCGGGCTTCCCTGGCGCGAGAAATTTGTACGGTATCGGCATGCATTGGGATGAg                                                                                    <  2:236339/143‑1 (MQ=255)
                                                   aTCTGTCCCCTCCACTCAAATTCATCCCAGCCGTCCAGCTGGCGTCGTTCTTGTTGCATTTCACGCTGAAAAATCTCTTCCAGTTCGCGTCGGGCTTCCCTGGCGCGAGAAATTTGTACGGTATCGCCATGCATCGGGATGAg                                                                                    <  1:631502/143‑1 (MQ=255)
                                                    tCTTTACCCTCTACTCAAATGCATCCCAGCCGGCCAGCTGGCGTCGTTCTTGTTGCATTTCACGCTGGAAAATCTCTTCCAGTTCGCGTCGGGCTTCCCTGGCGCGAGAAATTTGTACGGTATCGGCATGCATTGGGATGAGc                                                                                   <  2:330639/143‑1 (MQ=255)
                                                       ttACCCTCTACTCAAATTCATCCCAGCCGTCCAGCTGGCGTCGTTCTTGTTGCATTTCACGCTGGAAAATCTCTTCCAGTTCGCGTCGGGCTTCCCTCGCGCGAGAAATTTGTACGGTATCGGCGTGCATTGGGATCAGctct                                                                                >  1:534305/1‑143 (MQ=255)
                                                          cccTCTACTCAAATTCATCCCAGCCGTCCAGCTGGCGTCGTTCTTGTTGCATTTCACGCTGGCAAATCTCTTCCAGTTCGCGTCGGGCTTCCCTGGCGCGAGAAATTTGTACGGTATCGGCATGCATTGGGATGAGCTCTCgc                                                                             <  1:646148/143‑1 (MQ=255)
                                                           cctttgcTCAAATTCATCCCAGCCGTCCAGCTGGCGTCGTTCTTGTTGCATTTCTCGCTGGAAAATCTTTTCCAGTTCGCGTCGGGCTTCCCTGGCGCGAGAAATTTGTACGGTATCGGCATGCATTGGGATGAGCTCTCgca                                                                            <  1:442479/137‑1 (MQ=255)
                                                           ccTCTACTCTGATGCATCCCAGTCGTGCAGCTGGCGTCGTTGTTGTTGCATTTCACGCTGGAAAATCTCTTCTAGTTCGCGTCGGGCTTCCCTGGCGCGAGAAATTTGTACGGTATCGGCATGCATTGGGATGAGCTCTCgca                                                                            <  1:336011/143‑1 (MQ=255)
                                                           ccTCTACTCAAGTTCATCCCAGCCGGCCAGCTGGCGTCGTTCTTGTTGCATTTCACGCTGGAAAATCTCTTCCAGTTCGCGTCGGGCTTCCCTGGCGCGAGAAATTTGTACGGTATCGGCATGCATTGGGATGAGCTCTCgca                                                                            <  2:634758/143‑1 (MQ=255)
                                                           ccTCTACTCAAATTCATCCCAGCCGTCCAGCTGGCGTCGTTCTTGTTGCATTTCACGCTGGAAAATCTCTTCCAGTTCGCGTCGGGCTTCCCTGGCGCGAGAAATTTGTACGGTATCGGCATGCATTGGGATGAGCTCTCgca                                                                            >  1:92657/1‑143 (MQ=255)
                                                                cgccaaatcagtCCCAGCCCGCCAGTTGGCGTCGTGCGTGTTGCTTTGCACGCTGGAAGTCATCTTAACGTTGCACGCCGGCTTCCCGGTCGCGAGAAATTTGTATGGTAGCGGCATGCATTGGGATGAGCTCTCGCAGCATc                                                                       <  1:551787/132‑1 (MQ=255)
                                                                           tCCCAGCCGTCCAGCTGGCGTCGTTCTTGTTGCATTTCACGCTGGAAAATCTCTTCCAGTTCGCGTCGGGCTTCCCTGGCGCGAGAAATTTGTACGGTATCGGCATGCATTGGGATGAGCTCTCGCAGCATCCGCATATCCAg                                                            >  2:484255/1‑143 (MQ=255)
                                                                            cccAGCCGTCCAGCTGGCGTCGTTCTTGTTGCATTTCACGCTGGAAAATCTCTTCCAGTTCGCGTCGGGCTTCCCTGGCGCGAGAAATTTGTACGGTATCGGCATGCATTGGGATGAGCTCTCGCAGCATCCGCATATCCAgg                                                           >  2:560262/1‑143 (MQ=255)
                                                                                 ccGTCCAGCTGGCGTCGTTCTTGTTGCATTTCACGCTGGAAAATCTCTTCCAGTTCGCGTCGGGCTTCCCTGGCGCGAGAAATTTGTACGGTATCGGCATGCATTGGGATGAGCTCTCGCAGCCTCCGCATATCCAGggggcg                                                      >  2:857433/1‑143 (MQ=255)
                                                                                   gTCCAGCTGGCGTCGTTCTTGTTGCAATTCACGCTGGAAAATCTCTTCCAGTTCGCGTCGGGCTTCCCTGGCGCGAGAAATTTGTACGGTATCGGCATGCATTGGGATGAGCTCTCGCAGCATCCGCATATCCAGGCGGCGaa                                                    >  1:667665/1‑143 (MQ=255)
                                                                                      cAGCTGTCTTCGTTCTTGTTGCATTTCCCGCTGGAAAATCTCTTCCAGTTCGCGGCGGGCTTCCCTGGCGCGGGAAATTTGTACGGTATCGGCATGCATTGGGATGAGCTCTCGCAGCATCCGCATATCCAGGCGGCGAAAAt                                                 <  1:127351/143‑1 (MQ=255)
                                                                                                  ttCTTGTTGCATTTCACGCTGGAAAATCTCTTCCAGTTCGCGTCGGGCTTCCCTGGCGCGAGAAATTTGTACGGTATCGGCATGCATTGGGATGAGCTCTCGCAGCATCCGCATATCCAGGCGGCGAAAATGCAGTTGcgctc                                     >  2:774200/1‑143 (MQ=255)
                                                                                                       gttgCATTTCACGCTGGAAAATCTCTTCCAGTTCGCGTCGGGCTTCCCTGGCGCGAGAAATTTGTACGGTATCGGCATGCATTGGGATGAGCTCTCGCAGCATCCGCATATCCAGGCGGCGAAAATGCAGTTGCGCTCGCtgt                                <  2:751316/143‑1 (MQ=255)
                                                                                                            aTTTCACGCTGGAAAATCTCTTCCAGTTCGCGTCGGGCTTCCCTGGCGCGAGAAATTTGTACGGTATCGGCATGCATTGGGATGAGCTCTCGCAGCATCCGCATATCCAGGCGGCGAAAATGCAGTTGCGCTCGCTGTGCCTg                           <  2:348207/143‑1 (MQ=255)
                                                                                                              ttCACGCTGGAAAATCTCTTCCAGTTCGCGTCGGGCTTCCCTGGCGCGAGAAATTTGTACGGTATCGGCATGCATTGGGATGAGCTCTCGCAGCATCCGCATATCCAGGCGGCGAAAATGCAGTTGCGCTCGCTGTGCCTGAt                         >  1:533924/1‑143 (MQ=255)
                                                                                                                cACGCTGGAAAATCTCTTCCAGTTCGCGTCGGGCTTCCCTGGCGCGAGAAATTTGTACGGTATCGGCATGCATTGGGATGAGCTCTCGCAGCATCCGCATATACCGGCGGCGAAACTAGAGTTGcgcacgagctgctttaggc                       >  1:317049/1‑130 (MQ=255)
                                                                                                                    cTGGAAAATTTCTTCCAGTTCGCCTGCGGCTTCCCTGTCGCGAGAAATTTGTACGGTATCGGCATGCATTGGGATGAGCTCTCGCAGCATCCGCATATCCAGGCGGCGAAAATGCAGTTGCGCTCGCTGTGCCTGATGCGGat                   <  1:434906/143‑1 (MQ=255)
                                                                                                                        aaaaTCTCTTCCAGTTCGCGTCGGGCTTCCCTGGCGCGAGAAATTTGTACGGTATCGGCATGCATTGGGGTGAGCGCTCGCAGCATCCGCATATCCAGGCGGCGCAAATGCAGTTGGGGTCGCTGTGCCTCATGCGGatgcag               >  1:835625/1‑142 (MQ=255)
                                                                                                                            tctcTTCCAGTTCGCGTCGGGCTTCCCTGGCGCGAGAAATTTGTACGGTATCGGCATGCATTGGGATGAGCTCTCGCAGCATCCGCATATCCAGGCGGCGAAAATGCAGTTGCGCTCGCTGTGCCTGATGCGGATGCATGCCa           >  1:168829/1‑143 (MQ=255)
                                                                                                                             tacctCCAGTTCGCGTCGGGCTTCGCTGGCGCGAGTAATTTGTACCGTATCGGCAGGCATTGGGATGAGCGCTCGCAGCATCCGCATCTCCAGGCGGCGAAAGTGCCGTTGCGCTTGCTGTGCCTGATGCGGATGCATGCCaa          <  1:652813/139‑1 (MQ=255)
                                                                                                                               ctTCCAGTTCGCGCCGGGCTTCCCTGGCGCGAGAAATTTTTACGGTATCGGCATGCATTGGGACGAGCTCTCGCAGCATCCGCATATCCAGGCGGCGAAAATGCAGTTGCGCTCGCTGTGCCTGATGCGGATGCATGCCAAGc        <  2:512324/143‑1 (MQ=255)
                                                                                                                                ttCCGGTTCGCGTCGGGCTTCCCTGGCGCGAGAAATTTGTACGGTATCGGCATGCATTGGGATGAGCTCTCGCAGCATCCGCATATCCAGGCGGCGAAAATGCAGTTGCGCTCGCTGTGCCTGATGCGGATGCATGCCAAGCg       <  1:673641/143‑1 (MQ=255)
                                                                                                                                 tCCAGTTCGCGTCGGGCTTCCCTGGCGCGAGAAATTTGTACGGTATCGGCATGCATTGGGATGAGCTCTCGCAGCATCCGCATATCCAGGCGGCGAAAATGCAGTTGCGCTCGCCGTGCCTGATGCGGATGCATGCCCAGCgg      >  1:175533/1‑142 (MQ=255)
                                                                                                                                   cAGTTCGCGTCGGGCTTCCCTGGCGCGAGAAATTTGTACGGTATCGGCATGCATTGGGATGAGCTCTCGCAGCATCCGCATATCGAGGCGGCGGAAATGCAGTTGCGCTCGCTTGGCCCGGTGCCGGTGCATGCCAGGCggtg    >  2:179096/1‑140 (MQ=255)
                                                                                                                                    aGTTCGCGTCGGGCTTCCCTGGCGCGAGAAATTTGTACGGTATCGGCATGCATTGGGATGAGCTCTCGCAGCATCCGCATATCCAGGCGGCGAAAATGCAGTTGCGCTCGCTGTGCCTGATGCGGATGCATGCCAAGCGTGAc   <  2:703549/143‑1 (MQ=255)
                                                                                                                                    aGTTCGCGTCGGGCTTCCCTGGCGCGAGAAATTTGTACGGTATCGGCATGCATTGGGATGAGCTCTCGCAGCATCCGCATATACAGGCGGCGAAAATGCAGTTGCGCTCGCTGTGCCTGATGCGGCTGCATGCCAAGCGTGAc   >  1:546677/1‑143 (MQ=255)
                                                                                                                                     gTTCGCGTCGGGCTTCCCTGGCGCGAGAAATTTGTACGGTATCGGCATGCATTGGGATGAGCTCTCGCAGCATCCGCATATCCAGGCGGCGATAATGCAGTTGCGCTCGCTGTGTCTGATGCGGatgcagtggcggcgtgagc  >  1:747626/1‑129 (MQ=255)
                                                                                                                                            |                                                                                                                                        
GCCTGACAGGCCGGGCATTTTGCGCCCGCAATAAAACGTTTTCGGATTGCCATCTTTACCCTCTACTCAAATTCATCCCAGCCGTCCAGCTGGCGTCGTTCTTGTTGCATTTCACGCTGGAAAATCTCTTCCAGTTCGCGTCGGGCTTCCCTGGCGCGAGAAATTTGTACGGTATCGGCATGCATTGGGATGAGCTCTCGCAGCATCCGCATATCCAGGCGGCGAAAATGCAGTTGCGCTCGCTGTGCCTGATGCGGATGCATGCCAAGCGTGACC  >  NC_000913/3478738‑3479013

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.